Silurus meridionalis (southern catfish): 124393232
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Entry
124393232 CDS
T08004
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124393232 (nsun5)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
124393232 (nsun5)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Other ribosome biogenesis factors
124393232 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
124393232
NCBI-ProteinID:
XP_046716790
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Position
11:complement(13216742..13232479)
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AA seq
465 aa
AA seq
DB search
MALYMKAAEILGKVEQKKGAVKTLVYESKFQNIKQLFALVCETQKYSPVLQEIIENTRLL
KHTNLRQNLAKVLVYDLLIGQGIKCGGSWKAMMLKHRSRLQAALARIKVKRKVSRNQDLL
SPSSHYKNEIPRYVRVNTLKTTVEDVIDYLKREGFSYQGKASQLGDLCSLSGKTFMNDLH
LRDLLVFSAKMDFHNHYLYKAGHIILQDKASCLPAYLLDPPVGGHVIDACAAPGNKTSHL
AAIMKNKGKLFAFDLDTKRLSTMSTLLLRAGVTCHQLANEDFLKVDPLSPAYKEVTHILL
DPSCSGSGMVCLHDGNPEEQEQDPERLKALAGFQLRCLNHALKFPKLQHLVYSTCSVHPQ
ENEEVVSACLEKNSDFRLVHLLPEWPERGCDPLMQCLRASTTKTFTHGFFVAMLERQATP
NTESFDKKPASVSELFVEEKQTEVFVEQQLQPPAVKKRKRKKPKM
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcactttatatgaaagcagcagagattcttggtaaagtggagcaaaagaagggagct
gtgaaaactctggtgtacgaaagtaaatttcagaatataaagcaactatttgccctcgtg
tgtgagactcagaaatattccccagtgcttcaggagattatcgagaacaccaggcttctg
aaacacaccaacctccgacagaatttagcaaaggttctagtttacgacttgctcattggc
cagggaataaaatgtggtggaagctggaaggcaatgatgttaaaacaccgctccagacta
caagctgctttggctcgaattaaagtcaagcggaaagtcagtcgaaaccaggacctgctt
tctcccagttcgcactataaaaatgagattccacggtacgtacgagtgaacacactgaaa
acgacggtggaggatgtcattgattacctgaagagagagggattttcatatcaaggaaaa
gcaagccaacttggtgatttatgctctctctctgggaagacgtttatgaatgaccttcac
ctcagagatcttcttgttttcagtgcaaaaatggacttccataatcattacctgtataaa
gcagggcacattatcttgcaagacaaggccagttgtctccctgcgtaccttctggacccc
ccagttggaggccatgtgattgatgcatgtgcagcacctgggaataaaaccagccatctg
gcagccatcatgaaaaataaaggaaagctgtttgccttcgaccttgatacaaagagactg
tcaaccatgagcactcttctacttcgtgctggagtcacatgtcatcaattggccaatgag
gattttcttaaggtggatccactttccccagcatacaaggaggtgacacacatcctactt
gatccatcatgcagtggttcaggaatggtgtgtctgcatgatggtaacccagaggagcaa
gagcaggaccccgagcgtctgaaggcactagcaggatttcagctacgctgcctgaaccat
gcactgaagttcccaaagcttcaacaccttgtctactctacctgctccgtccatcctcag
gagaatgaggaagttgtgtctgcttgtcttgagaaaaattcggattttagattagttcat
cttcttcctgagtggcctgagcgaggttgtgacccactgatgcagtgtctcagagccagt
actacaaaaaccttcactcatggtttctttgtagcaatgctggaaaggcaggctactccg
aacactgaaagctttgacaaaaagcctgcttccgtaagtgaactttttgttgaagagaaa
caaacagaggtatttgtggaacaacaactacaacctcctgcagtaaagaaaaggaagaga
aaaaaacccaaaatgtag
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