Silurus meridionalis (southern catfish): 124393281
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Entry
124393281 CDS
T08004
Symbol
ppp2cb
Name
(RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit beta isoform
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04136
Autophagy - other
smeo04140
Autophagy - animal
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04350
TGF-beta signaling pathway
smeo04382
Cornified envelope formation
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124393281 (ppp2cb)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124393281 (ppp2cb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124393281 (ppp2cb)
04136 Autophagy - other
124393281 (ppp2cb)
09143 Cell growth and death
04110 Cell cycle
124393281 (ppp2cb)
04114 Oocyte meiosis
124393281 (ppp2cb)
09144 Cellular community - eukaryotes
04530 Tight junction
124393281 (ppp2cb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124393281 (ppp2cb)
09158 Development and regeneration
04382 Cornified envelope formation
124393281 (ppp2cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124393281 (ppp2cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124393281 (ppp2cb)
04131 Membrane trafficking [BR:
smeo04131
]
124393281 (ppp2cb)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393281 (ppp2cb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124393281 (ppp2cb)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124393281 (ppp2cb)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
124393281 (ppp2cb)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124393281 (ppp2cb)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
Others
124393281 (ppp2cb)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124393281 (ppp2cb)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124393281 (ppp2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Glyco_hydro_65N
zf-TAZ
Motif
Other DBs
NCBI-GeneID:
124393281
NCBI-ProteinID:
XP_046716886
LinkDB
All DBs
Position
11:complement(19768362..19776784)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDKVFTKELDQWVEQLNECKQLTENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHG
QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRFPERITILRGNHES
RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
TRRTPDYFL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgataaagtgtttactaaagagttagaccaatgggtggaacagctcaacgagtgc
aagcagctgaccgagaaccaagtcaggacgctgtgcgagaaggctaaagagatcctgacc
aaggagtccaatgtgcaggaagtgcgctgccccgtcacggtgtgtggcgatgtgcacggc
caattccacgatctcatggagctttttagaatcggagggaagtctcctgacacaaactac
ctgttcatgggcgactacgtagacagaggctactactcggtggaaacagtcaccctgctt
gttgcgctaaaggtccgtttcccagagcgcatcacgatattgagaggaaaccatgagagc
agacagatcacacaggtctatggcttctatgatgagtgcttgaggaaatatggcaacgca
aacgtctggaaatactttacagacctttttgactatctgcctcttacagccctggttgat
ggacagatcttctgtctgcatggtggtttgtctccatctatagacacactggatcacatt
cgcgctctagatcgtcttcaggaggtgccacatgaggggccgatgtgtgacttgctctgg
tcagaccctgatgaccgtggtggctggggaatctctcccagaggtgccggctacactttc
ggacaggacatctctgaaactttcaaccatgccaacggtcttaccctagtgtcccgtgcc
catcaacttgttatggagggatacaactggtgtcacgataggaatgttgtcaccatcttt
agtgcaccaaactactgctatcgctgtggcaaccaggctgcaatcatggaactggatgat
actcttaaatattctttccttcagtttgatcccgcacctcggcgtggagagccccacgtc
acccgccgcacccccgattatttcttataa
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