Silurus meridionalis (southern catfish): 124393294
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Entry
124393294 CDS
T08004
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124393294 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393294 (nipblb)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
124393294 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
ARM_ECM29
Cnd3
Motif
Other DBs
NCBI-GeneID:
124393294
NCBI-ProteinID:
XP_046716936
LinkDB
All DBs
Position
11:8379206..8411540
Genome browser
AA seq
2640 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRITEEVNCLLARRDDN
LVSQLVHSLNQVSTEHIELKDNLGSDDPEGDMPVLLQTVLSRNPNIFREKSMPTRYGVQG
GIMQQPMMPPYKMPQNSMHGSPASTNYQQTPVTPSPPSRFVQPQTGSGARFIPQQNSPVP
SPYAPQSPAGYMQYPHPPTYPQHQQIQVSVANPMVPGMRNIHDNKVSGQMSSNSANHNAR
HCSNEEYMSIVHRLGNEESDPSMRNASFSLRSPQSVCSPAGSEGTPKVGSRPPLILQSPP
PYTSPRDAAPDLLMDSPERKKKQKKMIKEEGDKGAMYDIVSSPSKDSTKLTLKLSRVKSS
ETEQPSELVPGSVEHGSDAENDLPCNSFREQSGYQQVPVLQNTGAVAAKQPGAVSGTPYD
EAELDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEPGAAGTAGGPGVGG
GGSAGNKPTPQEASAASNGANRPALMVSIDLQQAGRAEGQVECPVPAQEAQRWAEDGSDS
AGVLRLKSKTDEELQRAADGRPEVIKQQKAASDGRPDMPKHKQDSRRDSSGKVQGSDKRP
DLSKHRHDGKPDKIRLETPRKDDRSDLSRDGHREEKHKDRERDRERSSDGSKIRRPETPK
SSSKSEHERPGRDRDKERDKDRDKDRDRERKHRSESREHRDRRSPEYRSRPDSPRVKQES
RSGPDSGRPRTDLKSPNSKEERRSSDGTRKGTDGSKLPPPDNRAGEFPDFLLGGKSGALK
NFVIPKLKRDKDGNAEPRRPVENWSQPWVKLERLGQVEDISKRPKPVVVLQKLSLDEVQK
IIKERHATSSKSSKNRPSYGKSSKGAIDESVLKELPPHLLAEIESTMPLCERVKMNKRKR
STANEKPKYAEVSSDDDGESESAPKRSKKERDRTWECEDKKLSGERRRSGGYNEGRRSSG
SRYRDHSPDNSGNETPPPSISDVFKKMKMKEKQKKRKAYEPKLTPEEMMDSSTFKRFLAS
MDNILENLEDVDFTSLNADDDEIPQELLLGKHQLSELGSESAKIKAMGITFRIPSDKLVK
VLSILEKNIQDGSKLTTLMNHDNDAEDEERLWRDLIMERVTKSADSCLTALNIMTSPRMP
KAVYIEDVIERVLQFTKFHLQNTLYPQYDPVYRVDPHGGVLLSSKAKRAKCSTHKQRVIV
MLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVESVSELQLCAIKLVTAVFSR
YEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHL
PTDKDNTDDEYEKKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVT
SKMDQRSIDRILGEMSGKDETQQLQKALLGYLDENVETDPSLLFARKFYIAQWFRDTTTE
TEKAMKTQNQKDEDTAEGTHHAKDIETTGEIMQRAEKRKHFLRSIIKATPSQFGTLKMNS
DTVDYEDACLVVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPS
ILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVR
KRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKET
MTRKIINITDVVSACRDSGYDWFEQLLQNLLKTEEDASYKPTRKACAQLVDNLVEHILKY
EEESLSDCESKGVNSNRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNNQNDFMVI
CNVAKILELVVPLMDHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAIVNKVTHNYK
FVWACFNRYYGALNKLKTQHQEDPNSTVLGSNKPALLRSLFTVGALCRHFDFDREEFKGN
NKVVIKDKVLELLLYFTKNEDEEVQTKAIIGLGFLFIQHPGLMFVPDVKTLYNGQLSDRK
RSVNLKIQVLKNLQTYLQEEDSRMQEADREWKKLSKQEDLKEMGDISSGMSSSIMQLYLK
QVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKADQQLVE
IDKKYTGFIHMKAVAGMKMSYQVQQAIMASRNTIIRGFRQDESNSALCSHLFTMVRGNRQ
HRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPFQTQEEPLFIMHHIDITLSVSGSNL
LQSFKESLLKDSRQREKKKKKKEREKKYGSEEENEEDEYPETSRGNSSDEDEEVVYRSKK
TKRATVNSESDSDLEADDVDKVMDRLPDNPMPLLDFANASQGILLLLVLKQHLKNLYGFS
DSKIQKYSPTESAKVYDKAVNRKANIHFNPRQTVDFLTNSLSNAELTYEIKRKIVRQYLD
FKVLMEHLDPDEEDEEGEASASTHARNKAITALLGGSSPKNNAADSYDEDSDGDEKMPGS
SRRSKKGGDSADASGHMNETVEAMDVIAICCPKYKDRPQIARVIQKTNNGYSVHWMAGSY
SGTWAEAKKRDGRKLVPWVDTIKESDIIYKKIALTSAHKLTNKMVQTLRSLYAAKEGTSS
NT seq
7923 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattaccactcttgctgggattgctagcctcact
gacttgttaaaccagctgcccttgccttcccctctccctgccaccaccaccaagagcttg
ctgtacaatgggaggatcacagaggaggtcaactgtctcttggcccgcagggacgacaac
cttgtctcccagctggttcacagccttaaccaggtctccaccgagcacatagagctgaag
gacaacctgggcagcgatgacccagagggcgacatgccggtgctgctgcagacggtgctg
tccaggaaccccaacatcttcagggagaaaagtatgcccacccgatacggggttcagggc
ggtataatgcaacagccaatgatgccgccatacaagatgcctcaaaattccatgcatggc
agtccggcatccacaaactaccagcaaacccctgttactcccagtcctcctagtcgcttt
gttcagcctcagacgggctctggtgcccggttcataccccagcaaaacagcccagtgccc
agcccgtatgcccctcagagccctgctggttacatgcagtaccctcatcctcccacctac
cctcagcatcaacagatccaagtctctgtggctaaccccatggtgcctggtatgagaaac
atccacgacaacaaggtctccgggcaaatgtcaagtaactcagccaatcacaacgcacgg
cattgctccaacgaagagtacatgagcattgtccacagactgggaaatgaggagagtgat
ccttctatgagaaatgcctccttttccctccggtcgccccaatccgtgtgctctcctgct
gggagtgaagggaccccaaaagttggatcgcggccacctctgatccttcagtcgccacct
ccatacacctcaccaagagatgccgctcctgacctcctaatggactcacccgagaggaag
aaaaagcaaaagaaaatgataaaagaggagggtgataagggcgctatgtacgacattgtc
agctcaccctccaaagactccaccaagctgacgctgaagctatctcgggtcaaatcgtca
gagacagagcagcctagtgagcttgtgccaggtagcgtggagcatggctcggatgcagag
aatgatctgccttgcaacagttttcgggaacaatcagggtaccagcaggtcccggtgctg
cagaacacaggggcagttgcagccaaacagcctggagcagtcagcgggacaccctacgac
gaggccgaattggatgctctagctgagattgaaaggatagaacgcgaatcggctattgag
cgagagcgctgctctaaagaggttcaagataaagataaacccctgaagaagcggaaacag
gactcgtaccctcaggagcccggtgctgctggtactgctggaggccctggtgtaggcggt
gggggcagcgcagggaacaaaccaacgcctcaggaggctagtgctgcaagcaacggagct
aaccgtccagcacttatggttagcatagacctacaacaggcaggaagagctgaggggcag
gttgaatgccctgtgcctgcccaggaagcccagcgctgggctgaggatggctctgactca
gctggggtactgcgactcaagtcaaaaacagatgaggagttgcagagggcagcagacgga
cggcctgaggtcataaagcagcagaaagccgcttcagatggccgccctgacatgccaaaa
cataagcaggacagccggcgcgactcctcaggaaaggtacagggctcggacaagagaccg
gacctgtcgaagcacaggcacgatggtaagcctgacaaaatccgtctggagactccccga
aaagacgaccgttctgacctttcacgagatggccacagagaggaaaaacacaaagataga
gagcgggatagggagcgcagcagtgatggctctaaaatccggaggccggaaacccctaaa
tcctccagcaagtcagagcatgagcgtcctggtcgagacagagacaaggaacgagataaa
gaccgagacaaagaccgagatcgcgagcgtaaacaccggtccgaatcccgagaacaccgg
gacaggcgctcacctgagtaccgctcccgacccgacagtccccgcgtgaaacaggaaagc
cggagtgggccagactcgggtcgaccccgcactgacctcaaatctcccaacagcaaagag
gagaggcgaagctctgatggtaccaggaaaggtactgatggctctaaacttcctcctcct
gacaacagagctggagagtttcctgatttccttctaggtggaaagtctggtgcgttgaag
aacttcgtcattcccaagctgaaacgtgacaaggacgggaacgcggaacccaggcgacct
gtggagaattggagccagccatgggtgaagctagagagacttgggcaggtagaggacatc
agcaaacggcccaaacctgtggtagtgcttcagaagctttccctcgatgaggtgcagaaa
atcattaaggagaggcatgcgaccagctccaaatccagcaagaacaggccttcctatgga
aagtcctcaaaaggggccattgatgagtcggtgctcaaggagcttcctcctcatctgctt
gcagaaatcgagtccaccatgcctctgtgtgagagggtaaagatgaacaaacgcaagcgc
agtactgccaatgagaagcccaagtatgctgaggtcagctcagatgatgacggtgaatca
gagtcggctccaaagcgatcgaagaaggagcgagatcggacgtgggagtgtgaggacaaa
aagctctctggagagcgcaggcgtagcggaggctacaacgagggccgcagaagttcaggc
agccgataccgagaccacagtccagacaactccgggaacgagacgcctcctcccagcatc
agtgatgtattcaaaaagatgaagatgaaggagaaacaaaaaaagaggaaagcctacgag
ccgaagctaactccagaagaaatgatggattcttcgacgttcaagaggttcttggcaagc
atggacaacattttagaaaacttggaggatgtggactttacgtcgttaaacgctgacgac
gacgagatccctcaggaactccttctagggaaacaccagctatcggagttgggcagtgaa
tcggctaaaatcaaagcaatgggcatcacgttcaggattccatccgacaaacttgtaaaa
gtgctgagcatactggagaaaaacatacaagacggctccaagcttaccacgctcatgaac
cacgacaacgacgcagaggatgaagagaggttatggcgtgacctcatcatggagcgggtg
accaaatcggccgactcttgcctgaccgctctgaacatcatgacctctccacgcatgccc
aaggctgtctacattgaggacgtgattgagagggtgctgcagttcaccaagttccatctg
cagaacaccctgtaccctcagtatgaccctgtctatagagtggacccacacggaggtgtc
ttgttgagctcaaaagctaaacgggctaagtgttccacacacaagcaaagggttatcgta
atgctctacaacaaagtgtgcgacattgtcagcaatatctcggagctgctggagatccag
ctattaactgacactacaattctgcaggtctcttcaatggggatcacaccgttctttgtg
gagagcgtcagcgagcttcaactctgtgccattaaacttgtcactgctgtcttttctcgc
tatgagaaacacaggcaattgattctggaggagatcttcacctctctggccaggctcccc
accagcaagagaagcctgaggaactttaggttaaacagcagtgacgttgatggagaaccc
atgtacatccagatggtgaccgctctggtgctgcagctcatacagtgcgtggtgcatctt
cccactgacaaggataacaccgatgatgagtatgaaaagaaagtggaccaggatgtcctt
atcacaaactcgtatgaaactgcaatgaggacagcacagaacttcctctccgttttcctc
aaaaaatgcggcagcaagcagggagaggaagactatcggcctttgtttgaaaactttgtg
caggaccttctctcaacagtcaacaaaccagagtggcccgctgctgaactgctgctcagc
cttctaggccggttactggtgcatcagttcagtaacaaacagacagagatggccctgaga
gtggcctctttggactacctgggaacagttgctgctcgccttcgcaaagacgctgttact
agcaaaatggaccagagatctatagaccgcatcctcggcgaaatgtctggcaaagatgag
acccagcagcttcagaaagctctgttgggttacctggatgaaaacgtggagactgaccct
tctcttttgtttgcaagaaagttctacattgctcagtggttcagggacactacaacagag
acagagaaagccatgaagactcagaaccagaaggatgaagacactgcagaaggaacgcat
catgccaaggacatagagaccacgggcgagatcatgcagagagccgagaagcgcaaacac
ttcctgcggtcaatcatcaaggccactccatcgcaatttggcacattgaaaatgaactct
gatactgtggactatgaagatgcgtgtttagttgtgcgatatttggcctctatgaggccg
tttgcacagagctttgatatttatttaacacagatcttgagagtgctgggagaaagtgcc
attgctgtgagaacgaaagcgatgaagtgtctgtcagaggtggtggctgtggatcccagc
attttggctcggtcggacatgcagcgtggagtccatggtcggctaatggataactccacg
agcgtgcgagaggccgccgttgagctgctcggtcgttttgtgctaagtcgccctcagctg
actgagcagtactacgacatgcttattgaaaggatactggatactggcattagtgtgaga
aagcgggtgattaagatcttgcgggacatctgtctggagcaacccaccttcaacaagatt
actgagatgtgtgtgaagatgatccgaagggtcaacgatgaagaaggcattaagaaattg
gtgaatgaaacattccagaaattgtggttcactccaactccaaaccacgataaggaaacc
atgaccaggaagatcatcaatatcacagatgtggtgtctgcatgcagggattctggttac
gactggtttgaacagctgcttcagaatctgctgaagactgaggaagatgcctcgtacaag
ccaacacggaaagcctgtgcccagctcgtcgacaatctagtggagcacatcctcaaatac
gaggaggagtctctctccgactgtgagagtaaaggagtgaactctaatcgcttggtggcc
tgcatcaccacgctgtacttgttcagcaaaatccgagcacagctgatggtgaaacacgct
atgaccatgcagccctacctgaccaccaagtgtaataaccagaatgatttcatggtcatc
tgtaatgtagctaaaatcttagagttggtggtgcctctgatggaccatcccagtgagacc
tttctgaccactattgaggaggacctgatgaagctcatcatcaaatatggaatgacggtt
gtgcagcattgtgtaagctgtcttggggcaattgtgaacaaggtcactcacaactacaag
tttgtctgggcttgttttaaccggtactatggggcactaaacaaactgaagacccagcac
caggaggacccgaacagcacagtcctggggtccaacaagccagcactgctgcgttccctc
ttcactgtaggagctctgtgcaggcactttgactttgaccgagaggagttcaaaggaaat
aacaaggttgtcataaaggacaaggtattggagctgcttctgtattttaccaagaatgag
gacgaagaggtgcagacgaaagccattattggcttgggtttcctgttcatccagcaccca
ggcctaatgttcgtccctgacgtaaagaccctgtacaacggccagctgtccgacaggaag
aggtctgtaaacctgaagatccaagtgctgaagaatctgcagacctacttgcaggaagag
gactcacgaatgcaggaagctgacagggagtggaagaagttgtccaagcaggaagacctg
aaggagatgggtgacatctcatcaggtatgagcagctccatcatgcagctgtacctcaag
caagtcctggaggccttctttcacacacagtctagtgtgcggcactttgccctcaatgtc
atcgctctcacactcaaccagggtctcattcaccctgtacagtgtgtaccctatttgatt
gctatgggaactgatcctgagccaacaatgaggaataaagcagatcagcagctagtggaa
attgataaaaagtacacaggattcattcacatgaaggctgtggcggggatgaagatgtct
tatcaagtccagcaggctataatggcgtcccggaacacgatcattcggggtttccgtcag
gacgagtccaactctgcgctttgctctcaccttttcaccatggtgcggggaaatcggcag
caccggagagcgttcctcatttctctgctcaatctgtttgatgatagtgcgaagactgag
gtgaacatgctgctgttcattgccgacaacttggcgtgtttccccttccagacccaggag
gagcctctcttcatcatgcatcacatcgacatcacgttgtcagtgtctggcagcaacctg
cttcagtcttttaaagagtctttgttaaaggactccaggcagagggaaaagaagaagaaa
aagaaggagcgggaaaagaaatacggctcagaggaggaaaacgaggaggatgagtatcct
gagaccagcaggggaaacagcagcgatgaagatgaggaagttgtctataggtcaaagaag
actaagcgggctacagtgaactctgaatcggactctgacctggaggcggacgatgtggac
aaggtcatggaccgtctgccagacaaccccatgccattgcttgattttgccaacgcctct
cagggcatcctgctcctcttagtacttaaacagcatttaaagaatctctacggtttttcc
gacagcaaaatccagaaatactcacctacggagtcagcgaaagtgtacgacaaagcagta
aacaggaaagccaacatacattttaatccacgacagacggtagactttctgaccaacagt
ctctccaatgcagagctcacctacgaaatcaaaaggaagatcgtcaggcaatatttggac
tttaaggtactgatggagcacttggatcccgatgaagaggatgaggaaggtgaggcgtcg
gcaagcacccatgccagaaacaaagccatcactgctctgctgggaggctccagcccgaaa
aacaacgctgccgactcatacgatgaagacagcgatggagatgaaaaaatgcctggatca
tcaaggagatccaaaaaaggtggtgattcggcagatgcatcaggtcacatgaacgaaacg
gtagaagccatggacgtcattgccatctgttgccccaagtacaaggaccggccgcagata
gctcgcgttatccagaagacgaacaacggttatagcgtgcactggatggccggctcgtac
tctggcacttgggctgaggccaagaaacgggacggacgcaaactggtgccttgggtggac
actatcaaggaatcagatatcatttacaagaaaatcgccttgacgagcgcgcacaagctg
actaacaaaatggtgcagactttacgctcactgtacgcagccaaggaggggacttccagc
taa
DBGET
integrated database retrieval system
