Silurus meridionalis (southern catfish): 124393299
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Entry
124393299 CDS
T08004
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124393299 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124393299 (alcama)
04090 CD molecules [BR:
smeo04090
]
124393299 (alcama)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
ALCAM
124393299 (alcama)
CD molecules [BR:
smeo04090
]
Proteins
124393299 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
ig
I-set
V-set
C2-set
Syndecan
Insulin_TMD
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
124393299
NCBI-ProteinID:
XP_046716946
LinkDB
All DBs
Position
11:complement(15785898..15856197)
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AA seq
560 aa
AA seq
DB search
MRSVFCLGAFLAVVMFPPASGTKKVIGLYGDTIKVPCNDGDNRPEDLMFTKWKHSKENGT
AGDILVKQVQKEKAKIIATDSYKDRTSIDSDSSLIITGAILDDQRFFTCMVVSSNNVNEY
PVEVEVHKRPSAPEFRNKASRLDDGKLTPLGECVAASANPPAEIIWVKNNKTLEADNKLI
IISASITKDPATGLSTTTSKLQYTAGKQDATSKFACVVKHVTGPDQMSAPETFSIHYPTE
KVNLQVLPLGSIKEGDNVILKCQADGNPPPTSFNFHIKGKKVLVTDSDVYTLSGINRADF
GEYKCSLIDNENMQSSVNITVTYLDLNVIPSGNILKKVGESLEVKIDKNSSSEPSVIWSK
DNGKLDKLPDFSSLTYNHAGFYVCEASVAGIKRNASFKLVVEGMPVIKSLKKERSTDGKA
KVLICVAEGAPEPEVTWSVNGTHSQSQYSNGVVTYKLTVMPSANLTVTCRVSNSLGTASK
DIEVLSLNEEKPDSRKDDDDDKAKVIVGVVVALIVAAALVGIIYWLYMKNRQGSWKTNEK
ETGTSEESKKLEENNHRQEP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccgttttctgtctcggtgccttcttggctgttgtgatgtttcctccagcaagc
ggcaccaagaaggtcatcgggttgtacggcgataccatcaaggtgccttgcaacgatggc
gacaacagaccagaagatctgatgttcacgaaatggaaacattcaaaggagaatggcact
gcaggagatattttggtgaagcaggtacagaaggaaaaggcgaagatcatagccacggac
agctataaggaccgtactagcatcgattcagactccagcctaatcatcacaggtgcaatc
ctggatgaccagagattcttcacttgcatggtggtctcctccaataatgtcaacgaatac
cctgttgaggttgaagtgcacaagagaccgtcagcacccgaattcaggaacaaagcgagt
cggctggacgacggcaaacttacaccgctgggagagtgtgtagctgccagcgcaaacccc
ccagcagaaatcatctgggtgaagaataacaagacactagaggcagacaacaaactgatc
attatcagtgcctccataacgaaggacccagccactggtttgtccaccacaacctcaaag
ttgcagtacacagcagggaaacaggatgcgacctcaaagttcgcttgcgtcgtgaagcac
gtgaccggacctgaccaaatgtctgcacctgaaaccttcagtatccactaccccactgag
aaggtgaacctgcaggttctgcctctgggctccattaaggaaggtgataacgtgatactg
aaatgccaggccgacggaaaccctccacccaccagcttcaacttccacattaagggaaag
aaggtcctggtaaccgactcagacgtctacactctgtctggcatcaaccgagctgacttt
ggtgaatacaagtgctctctgatcgacaacgaaaacatgcagtcttcagtgaacatcact
gtcacctatctggacctgaacgtcattccctcaggaaacatcctgaaaaaggttggggag
tctttggaggtgaagattgacaagaattcttcaagtgaaccctcagtgatctggtctaag
gacaatggcaagctggacaaactgcctgacttcagctctctaacatataatcatgccggt
ttctatgtgtgtgaggcgtctgtagccggaatcaaacgcaacgccagcttcaaactggtt
gtggaaggcatgcctgtgattaagagtctgaagaaagagaggagcacagatggcaaagca
aaggtgctgatctgtgtggctgagggagcgcctgaacctgaagtgacctggagtgtcaat
ggaacccatagccagagccaatacagcaacggagtagtgacttacaagctgaccgtgatg
cccagtgcgaacctgactgtcacctgccgagtctctaacagtctaggcacagccagcaag
gacatcgaggtgctatccttaaatgaagagaaaccagattcccgaaaagatgatgatgac
gacaaagccaaggtgattgtgggcgtggtggtggctctcatcgtggcagccgcactggtt
ggcatcatctactggctgtacatgaagaacagacaaggcagctggaagacgaacgagaag
gagacgggcacctcagaggagagcaagaagctggaggagaacaatcatagacaagagcct
tag
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