Silurus meridionalis (southern catfish): 124393316
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Entry
124393316 CDS
T08004
Symbol
tln1
Name
(RefSeq) LOW QUALITY PROTEIN: talin-1
KO
K06271
talin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124393316 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124393316 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124393316 (tln1)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124393316 (tln1)
Exosomal proteins of other cancer cells
124393316 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_middle
I_LWEQ
VBS
Talin_R4
FERM_f0
IRS
FERM_M
RA_2
FERM_N
ACBP
Vinculin
PH_SLA1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
124393316
NCBI-ProteinID:
XP_046717005
LinkDB
All DBs
Position
11:20249248..20313294
Genome browser
AA seq
2540 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRMIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVTDLLMTICARIG
ITNHDEYSLVRDIGEEKKEETTGTLKRDKTLLRDDKKMEKLKQKLHTDDELNWLDHGRTL
REQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAG
YQCQIQFGDHNESKHKPGFLDLKEFLPKEYVKNKGEKKIFQAHKNYQNMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNKVARVETGSVALPVIMRPGAGGPESFQMGSMPQAKQQITIGQM
HTGHMPPLTSAQQALTGTINSSMQAVQAAQASLTDFDSLPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMED
EGGNGQQLLGAARNLACAVSDMLKTAQPASAEPRQNLLQAAGNVGQTSGELLQQIGESDA
DQQFQDMLMKLAKAVATAAATLVLKAKNVAQKTEDSAQQNRVIAAATQCALSTSQLVACT
RVVAPTISSPVCQEQLIEAGKLVAKSVEGCVDASQGATNDEQLLKQVGVAATGVTQALNE
LLQHIKQYASGGQPIGRHGEATDRILDVTENIFSSMGDAGEMVRQARILAQATSDLVNAI
KADAEGETDLENSRKLLSAAKLLADATAKMVEAAKGAAAXPDSEEQQQKLREAAEGLRMA
TNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHAASSNKNPAAQQQLVQSCKVVAE
QIPQLVQGVRGSQAQPDSPSAQLALIGASQNFVQPGTKMVTAAKATVPTISDQASAMQLS
QCAKNLANALAELRTAVQKAQEACGPLEIDNALNAVRGLEKDMQEAKVAAAEGKLRPLPG
ETLEKCSQDLGSNTKAVSSAIAQLLSEATQGNENYTGMAARDAAQALRSLASAARGVAAS
TEDRQSCNAVLDCAGDVLDKSGNLIEETKRAIAKPGDPESQQRLAQVAKAVSQALNRCVN
SLPGQRDVDNAIRTVGEASKKLLSDQFPASGKTFQEAQANLNQAAAGLNQSANELVQASR
GTTQDLTKATGKFGQDFSHFLEAGMDMAGQSQSKEDQTQVVTNLKTISMSSSKLLLAAKA
LSTDPNSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRGMLENPT
EAVNDLGYFDCIDSVMENSKVLGEAMAGISHNAKNSNLLEFGDAVGSASKALCGLTEAAA
QGAYLVGVSDPNSHAGQKGLVDPTQFAKAKQSIQMACQNLVDPACTQSQVLSAATIVAKH
TSALCNACRLASSKTSNPVAKRQFVQSAKEVANSTANLVKSIKALDGAFNQENRHKCKAS
TGPLIEAVDNLTAFASNPEFASVPAQISPEGLAAMEPIVAAAKTMLESSTGLIQTARSLA
VNPKDPPKWSVLAGHSRTVSDSIXKLITNMRDNAPGQRECDEAIEVLNNCIREVDQASLA
AISQQLSPRDDLSHEALHEQMAASVQEISHLIDPVAIAARSDASQLGHKVSQMASYFEPL
IMAAIGTASKILNSQQQMSVLDQTKTLAESALQMLYTAKEAGGNPKAAHTQEALEESVQM
MKEAVDDLGGTMSEAASAAGAVGGMVDSITQALNKLEDSGVEPEGTFVDYQTTMVKTAKA
IAVTVQEMVTKSNANPDELGGLANQLTTEFGDLASEARCAAITAESDEIGSHIKKQVTEL
GYGCTGLVTKAGALQCSPNDSITKKELIDAARKVSEKVSHVLAALQAGNRGTQACITAAS
AVAGIIADLDTTIMFATAGTLNRENAETFADHRENILKTAKVLVEDTKLLVSGAGASQEK
LAQAAQSSVNTITKLADVVKLGAASLGSEDPETQVVLINAVKDVAKALGDLIRTTKAAAG
KPHDDPAMLQLKGSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATIEHIKQELTVFSSP
DPPPKTATPEEFIRMTKGITQATAKAVAAGNSCRQEDIIATANLSRRAIAEMLHSCKQAA
YHPEVNPEVRARALRFGRECSHGYLGLLEHVLVIIQKPTHDLKQQLATFSKRVAGSVTEL
IQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAAKKLEQLKPRAKPKEADESLNFEE
QILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIPANAVDDGQWSQGLISAARMVAAA
TNNLCEAANSAVQGHASEEKLISSAKQVAASTAQLLVACKVKADQDSQTMKRLQAAGNAV
KKASDNLVKAAQKAAFDAQDDQAVMVKSKMVGGIAQIIAAQEEMLRKERELDEARRKLAQ
IRQQQYKFLPSELREDGNEQ
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctatcactaaagatcggggtgggaaatgtggttaaaacgatgcagtttgag
ccctccaccatggtgtacgacgcctgccgcatgattcgggagagagttcctgaagcgcag
cttggccagcccaatgactatggcctgttcctctcagacgaggacccaaagaaaggcatt
tggctggaagccggaaaagctctggactactacatgttgaggaatggggacacactcgaa
tacaagaagaaacagaggccactcaaaatccgcatgttggacgggacagtgaaaaccgta
atggtcgatgactctaaaatcgttactgatttgctcatgaccatctgtgccagaataggc
ataacaaaccacgacgaatactccctggtgcgagatattggcgaggagaagaaggaggag
accacagggacgctgaagagagacaaaaccctcctgagggatgacaaaaagatggagaaa
ctcaagcagaagctccacactgatgatgaattgaactggctggaccacgggcgaacactg
cgtgagcagggggtggaagagaccgagatgctgctcctcaggcggaagttcttttactct
gaccagaatgtagactccagagacccagttcagctcaacctgctgtatgtacaggctcga
gacgacattctgaatggctctcaccctgtctcattcgacaaagcttgcgagtttgccggt
tatcagtgtcagatccagtttggtgaccacaacgagtccaaacataaaccaggattcctt
gatctgaaagagtttttacccaaagagtatgtgaagaacaaaggggagaagaagattttc
caggcacacaagaactaccaaaatatgaccgagattgaagccaaagtcagctacgtcaaa
ctggcccgctctctcaaaacctacggcgtgtctttctttttagtgaaggaaaaaatgaaa
ggaaaaaacaagctggttcctcgcctcctgggtatcaccaaagagtgtgtgatgagggtg
gatgagaagaccaaggaggtgatacaagagtggagtctgaccaatattaagcgctgggct
gcctctcctaaaagcttcaccctggactttggagattatcaggatgggtactactcagtc
cagaccactgaaggagaacagattgcacagctcattgctggatacatcgacatcatcctt
aaaaagaaaaagagcaaagaccactttggattggagggagatgaggagtcgacaatgctg
gaggattcagtttcacctaaaaagtcgacagtgctacagcagcagtttaacaaggtggcg
agggtagagaccggctctgtggccctgcctgtcattatgaggccaggtgcgggaggtcca
gagagcttccagatgggctccatgccccaggccaaacagcaaatcaccattggccaaatg
cacacagggcacatgccaccactgacctccgctcagcaggcactgacgggcaccattaac
tccagtatgcaggcggtgcaggcggctcaggcttctttaactgactttgacagcctacca
cctctgggcaccgatgcggcctctcaagcctggaggaagaacaagatggatgagtccaaa
catgaaatccattctcaggtggatgctattactgcaggaacagcatctatggttaacctt
actgcaggagacccagcagagacggattatacagctgtgggttgcgcagtaaccaccatc
tcctccaacctgactgaaatgtccaagggtgtaaagttgctggcggcgctgatggaggat
gagggtggaaatggacagcagctcctgggtgccgcccgtaacttggcctgtgccgtgtca
gacatgttgaagaccgctcaacctgccagcgctgagcctcgccagaacctcctacaggcc
gcaggtaacgtgggccagaccagtggagagctgctgcagcagataggagagagtgacgct
gaccaacagttccaggacatgcttatgaagctggctaaagctgtggctacagcagctgca
actctggtactgaaggcgaagaacgtggctcagaagaccgaagattctgcccagcaaaac
cgggttatcgcggctgccacacagtgcgccctttccacctctcagctggtggcatgcacg
cgggtggtggctcctacaatcagttctccagtatgtcaggagcagctgatagaggcaggg
aaactggtggctaaatcggtcgaaggttgcgtggatgcatcacagggggctaccaacgac
gagcagctgttaaagcaagtgggcgtggccgccacaggtgtcacccaggcgcttaacgaa
ctgctgcagcacattaagcagtatgccagcggaggccaaccaatcggacgccacggagaa
gccaccgaccgcatcctggatgtaaccgagaacatcttcagctccatgggagacgcaggt
gagatggtgcgacaggctcggatcctggctcaggccacctccgacctggtcaacgccatt
aaagcggatgccgagggagaaacagacctggagaactctcgtaaactgctctcagccgcg
aagcttctagccgatgccactgccaagatggtggaggctgccaagggtgctgccgcanac
ccagacagcgaggagcagcagcagaagttacgcgaggccgccgagggcctgcgcatggcc
accaatgccgcagcacagaacgcaatcaaaaagagactggtcaacaagctggagaacgct
gcaaaacaggccgctgcagccgcaactcagaccatagctgccgcccagcacgctgcctct
tcaaataagaacccagctgcacagcaacaactcgtacagagctgcaaggtggtggcagaa
cagatccctcagctggtacagggagtgagaggcagccaggcacaacctgacagtcccagc
gctcagcttgctctaattggagccagccaaaacttcgtgcagcccggaaccaagatggtg
actgcagccaaggctacagttcccactattagtgatcaggcctctgccatgcagttgagc
cagtgcgccaaaaacctagccaatgcattggctgaactacgcacagctgttcaaaaggct
caggaggcatgcggtcctctggagattgataacgctctgaatgcagtgagaggattggag
aaagacatgcaggaggctaaagtcgctgcagccgaagggaaactcagacctcttcccgga
gagacgctggagaagtgctctcaggacctgggctccaacaccaaagcagtgagctccgct
attgcccagctactaagtgaagctacgcagggcaatgagaattatactggcatggcagca
cgggatgcggcccaggctctccgctctctcgcatctgcagcccgcggagtagccgccagc
acagaggaccggcaatcatgcaacgccgtattggactgtgcaggagacgtcctcgacaaa
tctggcaacctcatcgaagaaaccaaaagagccatcgccaaacctggagatcctgagagt
cagcagcgattggctcaggtggccaaagctgtgtctcaggctttgaaccgctgtgttaac
tcccttcccggacagagagatgtggataatgcgattaggactgtgggagaggccagcaaa
aagctcctttctgaccagttcccagctagtggaaagaccttccaggaagctcaagcaaac
ctgaaccaggcagctgcaggcctcaaccagtcagccaacgagctggtacaggcgtcacgt
ggcaccacacaggacctaaccaaggcaacaggcaagttcggccaagacttcagccacttc
ctggaggccgggatggacatggctggtcaatctcagtctaaagaagatcagactcaggtg
gtgaccaacctgaagaccatttctatgtcatccagcaaactgctgttggctgcaaaggct
ttgtctacggatcccaattctcccaacctgaagaaccagttggctgctgctgcacgtgcc
gtgactgacagcatcaaccagctgatcaccatgtgtacacagcaagcaccaggtcagaag
gaatgtgacaacgcactgagggagctggagacggtgcggggcatgctggagaacccaaca
gaggcagtgaatgacttgggatatttcgactgcatcgacagcgtgatggagaactccaag
gttttgggtgaagcgatggcaggcatctcccacaacgcaaagaacagtaacctgctcgag
tttggagacgcggtcggctctgcctccaaagccttgtgtggcctcaccgaagcggctgct
cagggtgcgtatctggtgggtgtctctgacccgaacagccatgctggacagaagggtttg
gtggatccgactcagtttgccaaagccaaacaatccattcagatggcctgtcagaacctg
gtggaccctgcctgcacacagtcccaggtcctctccgctgccacgattgttgccaaacac
acctccgccctgtgcaatgcctgccgcctcgcctcctccaaaacatcaaaccctgttgct
aagcgacagtttgtccagagtgccaaagaagtggcaaatagcaccgctaaccttgtcaag
tcaatcaaagccttggatggagcctttaaccaggagaacaggcataagtgtaaggcctcc
acagggccgctgattgaggctgtggataatctcactgcctttgcttccaacccagaattt
gccagtgtgcctgcacagatcagcccagagggtctggctgccatggagcccattgttgct
gcagctaaaactatgctggagagctcaacaggtctgatccagactgcacgctcactggcc
gtgaatcccaaagatccgcccaagtggtctgtgctggctggtcactccaggactgtgtct
gactccatcnaaaagctcatcaccaacatgagagacaatgctccaggtcaaagagagtgt
gacgaggccatcgaggttctcaataactgcatccgtgaagtggatcaggcttctcttgct
gccattagccaacaactctcacccagagatgacctctcccatgaggctctgcatgagcag
atggcagcctcagtgcaggagattagccacctgatcgaccccgtggccattgcagctcgc
tctgatgcctcccagctgggacacaaggtgtctcagatggcaagctactttgagccgctc
atcatggcagctatcggtaccgcatcgaaaatactcaacagccagcagcagatgagtgtg
ctggaccagacaaaaactctggcagagtctgctttacagatgctctacacagccaaagaa
gcaggcggcaaccctaaggcggcccacacccaggaagccctggaggagtctgtgcagatg
atgaaggaggctgttgatgacctgggaggtactatgtctgaagcagccagtgcagcggga
gcagtaggaggcatggtggactccattacccaggccctcaacaaattggaggactctgga
gtggagcctgaaggaacctttgtggattaccaaactaccatggtgaagactgccaaggct
atcgcagtcactgtgcaggagatggtcactaaatcaaacgccaaccccgatgagcttggc
ggcctagccaatcagctgaccaccgagtttggtgacttggcatcggaggctagatgtgct
gccatcactgctgagagcgatgagatcggctctcacattaagaagcaggtaacagaacta
ggatacggttgcactgggttggtcaccaaggcaggagctctgcagtgcagtcccaacgat
tcaatcaccaagaaggagctcattgatgctgcccgcaaagtctctgagaaagtgtctcat
gtgttggccgcactgcaggccggtaaccgcggtactcaggcttgtatcacagctgccagt
gctgtagccggcatcattgctgaccttgacaccaccatcatgtttgccacagcgggtaca
ctcaaccgggagaatgcagagaccttcgccgatcacagagagaacatcttgaagacggct
aaagttctggtagaggacaccaagctgctggtgtctggagcgggagccagtcaggagaag
ctggcccaggccgcccaatcttcagtcaacaccattacaaaactggccgatgtggtcaag
ctgggggccgccagcctgggctccgaggaccccgagacacaggtggtcctgatcaacgca
gtcaaagatgtggctaaagctctgggtgacctcatcagaaccaccaaggcagcagccgga
aagcctcatgatgacccggctatgctccagctgaagggctctgcaaaggtcatggttacg
aacgtcacgtccctgctgaagactgtgaaggctgtggaggacgaggccactaaaggaaca
cgagcactggaggccaccattgagcacatcaaacaggagttgactgtgttcagcagtcct
gatcctcctccaaaaaccgctactcccgaggagtttatccgcatgaccaaaggcatcacg
caggccacagccaaagcggtggctgcaggaaactcgtgtcgccaggaggacatcatcgct
acggccaacctgagcagaagagccatcgccgaaatgctgcactcctgcaagcaagcagct
taccacccagaggtaaacccggaggtgagggctcgtgccctgcgctttggaagggagtgc
tcccatggctaccttggtctcctggagcatgtgcttgtgattatccaaaagcccactcac
gatctgaagcagcagctagcaaccttctccaagcgggtggctggctccgtcactgagctc
atccaggcagccgaggccatgaaaggtactgaatgggtggaccccgaggatcccacagtc
attgcagagaacgagcttcttggtgcagcggctgccatcgaagctgccgctaagaaactg
gagcagctgaaaccacgagctaagcccaaggaggctgatgagagcctgaactttgaagag
cagattttggaggcggccaagtccatcgctgcagccactagcgcgctggtgaaggccgca
tccgcagcacagagagaactcgtggcccagggcaaggtcggcgccatcccagcaaacgcg
gttgatgatggacagtggtctcagggtctcatttcagctgcccgcatggtggccgcagca
accaataacctgtgcgaggctgcgaattcggcagtgcagggccacgctagtgaggagaaa
ctgatttcttcagccaaacaagtggctgcttctacagctcaactgcttgtggcctgcaag
gtcaaggctgaccaggactctcaaaccatgaagaggctgcaggcggctggtaacgctgtt
aagaaggcttcggataatctagtgaaggcggctcagaaggctgctttcgatgcccaggat
gaccaggctgtaatggtgaagagcaagatggtgggcggcatcgctcagatcattgctgct
caggaggagatgttaaggaaggagagggagcttgatgaagccaggaggaagctagcccag
atccgacagcagcagtataagttcctgccctcagagctgagggaggacggcaacgagcag
tga
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integrated database retrieval system
