Silurus meridionalis (southern catfish): 124393321
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Entry
124393321 CDS
T08004
Symbol
rasgrf2a
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2 isoform X1
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124393321 (rasgrf2a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
IQ
GOLGA2L5
PH_20
PH_16
PH_13
Motif
Other DBs
NCBI-GeneID:
124393321
NCBI-ProteinID:
XP_046717016
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Position
11:complement(11575511..11616676)
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AA seq
1278 aa
AA seq
DB search
MQKSVRYNEGHALYLSVIARKEGIKRGYLNKKTTENSRWNEKYFALHQNILFYFENEQST
RPTGIYLLEGSTCERVSAPKVSSISRDNPDKQQHYFLVIFGHDGQKPLELRAEEDTDCTE
WVEAIQQASYSNLIIEREVLMQKYIHLVQIMETEKVAANQLRTQLEDQDTEIERLKTEVV
AQNKSNERMLPCHSNQEEDDPDIQKIKKIQSFMRGWLCRRKWKIIVQDYICSPHAESMRK
RNQIVFTMLEAETEYVLQLSILVNCFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLH
EIFHQGLKARIANWPRLVLADLFDILLPMLNIYQEYVRNHQYSLQVLANCKQNRDFDKLL
KQYESNAACESRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLDFAKSKLEELS
KMMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGFLIQLPSGERGKLSKVRLG
TLSLRKEGERQCFLFTKHLLICTRTSSGKLHLLKQGGTLSLIECTLIEELDATDEDYTAA
GQGFNHLEFKLLVEPVDGPSFAVILLAPSRQEKAAWTSDISQCIDNILCNGLMTSVFEEN
SKVTVPHMLKSDTRLHNDDVDICFSKTLNSCKVPQIRYASVDRLLERLTDLRFLSIDFLN
TFLHTYRIFTTAAVVMNKLNDIYKRPFTSIPFRIQYHSSDRLSISSICPDYSLKITRLAL
EQSKSLELFFATNQSQWGNELLNNKSPRLSRKLSTPPPLSIPSWTSSPMHCRKLSLSSPV
SGGKAMALDLSASSLAVSSSISAYNPMVSSPPPHCTKSPLDLSKGPSSPELGPTTPEEGG
ELTNVDGFCGKLRRSVRRNFLESLSFDKSIPETPTSVESGDLSLCSLPSTPSSTPRHPRY
RQPGGQSMENLRCTMSSASAFAIATAAAGHSGPQGFTSPEKSYDKEFLIRRAATNRVLNV
LRHWVSKHSQDFEMNGELKAGVISLLEEVLRDPDLLPQERKATTNLLSALSHEEPDDTQL
KIKDFLLMSEYPKMECFESLSAMELAEQITLLDHIVFRSILYEEFLGQGWMKMDKNERTP
YIMKTSQHFNDMSNLVASEIMSHTEVSSRANSIDKWLAVADICRCLNNYNGVLEITSALN
RSAIYRLKKTWAKVSKQTKALMDRLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTDL
AFIEEGTPNFTEEGLVNFSKMRMISHVIREIRQFQQTPYRIEHQLKVTQFLLDKTIVMDD
DTLYELSLKLEPRLASDN
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaagtgtgcgctacaatgaggggcacgcactttatctctctgtgatcgccagg
aaagagggaattaaaagaggctacttaaacaagaaaacgactgagaacagtcgctggaac
gagaaatactttgctttgcaccaaaacatcttgttttactttgagaatgagcagagcacc
aggcctacggggatttacttactggaaggaagcacctgcgagcgcgtctctgctcccaaa
gtatcttcaatcagccgagacaatccagataaacaacagcactatttcctggtcatcttt
ggccatgatgggcagaaacctctggagctgcgggcagaagaggatacagattgtactgag
tgggtggaagccattcagcaagccagctactctaaccttatcatcgagcgtgaggtgctc
atgcaaaaatatatccacctggtgcagatcatggaaacagagaaagtggctgccaatcag
ctccgcacacagcttgaagaccaggacacagagattgaaaggctcaagactgaggttgtg
gcccagaacaaatcaaatgagagaatgttaccttgtcattccaatcaagaagaggatgac
cctgatatacaaaaaataaagaagatacaaagcttcatgcgtggctggctttgtcggaga
aagtggaagatcattgtacaagactatatctgctcacctcatgctgaaagcatgaggaag
aggaaccagattgtcttcaccatgttagaggctgagacagaatatgtgctccaactgtcc
atcttggtgaactgcttcctgaggccgctcaggatggctgccagttccaaaaaacctcca
atcagccatgacgatgttagcagcattttcctcaatagtgaaactataatgtttcttcat
gagatatttcaccaaggcctaaaagcaagaattgccaactggccaagattagttttagct
gacctgtttgatatattgctgccaatgttaaacatctaccaagaatatgtgcgaaaccac
cagtacagtcttcaggttctagctaactgcaagcagaaccgggactttgacaagctcctg
aagcagtacgagtccaatgctgcctgtgagagtcgaatgctggagacatttctgacctac
ccaatgtttcagatacctcgatatatcatcacgctgcatgagctgcttgcacacactccc
catgagcacgtagaacgcaaaagtctggattttgccaagtcaaaactggaggagctgtca
aaaatgatgcatgatgaagtgagcgacactgagaacatccgtaagaatcttgccattgag
cgcatgattgtggagggctgtgacatcctcttggataccagccaaacctttgtacggcaa
ggctttctgattcagctgccatcaggggaaaggggcaagctgagcaaagtgcgcctgggt
acattatccctgcgcaaagagggcgaacgccagtgttttctctttaccaaacacctactg
atttgcacccgtacctccagtggcaagctgcatctcctcaaacaaggaggcactctgtct
ctgatagagtgcaccctcattgaagagctagatgctactgatgaagactatactgctgcg
ggtcagggctttaatcatttagagtttaagctgctggttgagccagttgatgggccgtcc
tttgcagtaatactgctggcaccatctcgccaggagaaagctgcctggaccagtgacata
agtcagtgcatcgataatattctttgcaatggcctcatgaccagtgtttttgaagagaac
tccaaggtaactgtgcctcacatgctcaagtcagacacacggttacacaatgatgatgtg
gatatttgcttcagcaagacacttaactcatgcaaggttccacagatccgttatgccagc
gttgaccgtctgctggagcggctcactgatctgcgcttcctctccattgacttcctcaat
acattcctgcacacataccgcatttttaccactgcagctgtagttatgaacaaattgaat
gacatctacaagaggcctttcacctccatccctttcaggattcagtaccactcatctgac
cgtttgtccatctcctccatctgtcctgactacagcctgaagataacaaggcttgccctg
gaacagtctaagtccctagagcttttttttgccactaaccagagccagtggggaaatgag
ctcctgaacaacaagtccccccgactgtcacgcaagttgtctacaccgcctcctctctca
atcccttcctggacatcttcacccatgcactgccgtaaactgtcgctcagttcacctgta
agtgggggtaaagccatggctctggacctctctgcctcgtccttggcggtcagtagttcc
atttctgcctacaaccccatggtctcttctccacccccacactgtaccaaatctccactg
gacctgagcaagggccccagttcaccagagctaggtcccaccacaccagaagaaggtggg
gaactcacaaatgttgatgggttctgtggcaagctgaggaggagtgttaggcggaatttc
ttagaatcattgtcatttgacaagtctatcccagagacacctacctctgttgagtcagga
gacttgtctctgtgcagcttgccatctaccccttcctctaccccacgacatccccgttac
agacagccaggaggtcagtccatggagaatttgcgctgtacgatgtcttctgcctctgcc
tttgccatcgccacagcagcagctggacatagtggccctcaaggtttcaccagcccagag
aagtcatatgacaaggagtttcttatccgccgggccgccacaaacagggtgctcaacgtc
ctgcggcactgggtttccaagcattcacaggactttgaaatgaatggcgaactaaaggcg
ggagtcatcagtcttctagaggaagtgctgagggatcctgacctgctacctcaggaaaga
aaagccacaaccaacttactaagtgccctttctcacgaggaaccagatgacacgcagctt
aaaatcaaagattttctgctaatgtcagagtaccccaaaatggagtgctttgagtctttg
tctgcaatggagctggctgagcaaatcaccttactggaccacattgtgttcagaagtatt
ctttatgaggaatttcttggccaaggatggatgaaaatggacaaaaatgaaagaactcca
tacatcatgaagactagtcagcacttcaatgatatgagtaatctggtggcatctgagatc
atgtcacacacagaggtgagctccagagctaactcgattgacaaatggttggcagtggct
gatatctgccgctgcctcaacaactacaacggagtgctggagattacatctgctctcaat
cgcagtgccatttacaggctgaaaaagacctgggctaaagtcagcaagcagaccaaagca
ctaatggataggctacagaaaacagtgtcttcagaaggaagatttaaaaacctaagggaa
accctgaaaaactgcaatcctccatgcgtaccatatttgggcatgtacctaacagacttg
gcatttattgaagaaggtacaccaaattttacagaagagggactggtcaatttctccaaa
atgagaatgatttctcacgtcataagagagatacgccagtttcagcagaccccctacagg
atagaacatcagctcaaggtgacacagttcctactagacaaaacaatcgttatggatgat
gacactctttacgaactgtctctaaagcttgaaccaagactcgcctctgacaactga
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