Silurus meridionalis (southern catfish): 124393393
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Entry
124393393 CDS
T08004
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124393393 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393393 (supt20)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124393393 (supt20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
BZP1_C
CCDC-167
Motif
Other DBs
NCBI-GeneID:
124393393
NCBI-ProteinID:
XP_046717148
LinkDB
All DBs
Position
11:13264207..13285762
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AA seq
830 aa
AA seq
DB search
MQQDLEYALDRAENIVESARQRPARRRVSSSGRKSLYQKLYELYMEECEKEPELKNLRRN
VNLLEKLVSQESLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEAELLDYLDAEEL
PPILVDLLEKSQVNIFHCGCVITEVRDYRQSGNTKMPSYQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKLQLESQLILATAEPLCLDPSITVTCTANRLLYNKQKMNTRSMKRYFKR
YSRAALNRQQELANLPTPPQLRLLDYLHKRKERKPPPAVDLKISKAGNCVDMWKQTGCQL
TTPAEIDVEKYAVVEKSIKLEDSQPPQVWPAQDKNDDYIFECEVGGQPQRTKVTIFQSMG
DPLVYGKIYSSNDPKMEEDVSDVHLIHPPFLLGSKVDADRFLSQYKDVYETDLKCEVKIL
HSSNNVGAQGQLSPTRETEVDGFSALVQSSVLGKGVKHKPPPIKLPSGSSSSSSGNPYST
QAPSGHLKCPTPPPNKSQSLSRKHSIELSQVGLLSPAALSPMQRSGTPKPSTPTPTNTPC
STPHPVDIQGTTPSVTPTPQDPTMPQQQTLLAPFSQQQMALPVMTIPLPTSISTGTTSSQ
VMTNPAGLNFINVVGSVCSPQALMTGSNSMLGCSPGINLSGILPPGGLMPSALPAMQPAA
SAGAPFGLNNTQSLRPLNLLQIPATPLIFNPLQQQQISQFSPQQQSSQSATSSPQQQNDS
TEQGLTAEQGLAAQQTAVINLTGVGGFMPSQTVLSQLGCGLEGSGSSLPSPRLQQQHQPQ
IQLQFLQHQMQQQMAMAAGAGPQATLPRQHSGNQPRSKRKRSMPQPLPKS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagacctagaatatgcattggatcgggctgagaacattgttgaaagtgctcgt
cagcgaccagctagaaggagggtgtcttccagtgggagaaaatccttgtatcagaaactt
tatgaattgtacatggaggagtgtgaaaaagagccagagctaaagaatcttagaagaaat
gtgaatctacttgagaagctggtctcacaggagtcgctgtcatgcctggtagtcaatctg
taccctggaaatgaaggatactcacttatgctcagaggcaaaaatggatctgattcagag
accattcggcttccgtatgaagaagcagagttactggactacctggatgctgaggagttg
ccacctattcttgtggaccttttagaaaaatcacaagtcaacatatttcactgtggatgt
gtgatcacagaggttcgagattacagacagtcagggaacaccaagatgccgtcttatcag
agccgccatgtactgctgagacccactatgcagaccctgatctgtgatgtccatgctatg
acgagtgatcaccacaagtggacgcaggatgataaactgcagctggaaagccagttgatc
ctggccacagcagagcctctgtgcctggacccttcaatcactgtcacctgcactgccaac
cggctactatacaataaacagaagatgaacacacgctctatgaaacggtattttaagaga
tactcacgtgcagcgctgaatcgacagcaggagctggccaacctccctacacctccacaa
cttcgcctgctagactacctgcacaaaagaaaagaaaggaaaccaccgccagctgtagat
cttaagatctccaaggctggaaattgtgtagacatgtggaaacaaactggctgccagctg
actactccagctgagattgatgtggagaaatatgcagtagtggagaagtcaatcaaactg
gaggattctcagccaccacaagtttggcctgcacaggacaagaacgatgactacattttt
gagtgtgaagtgggtggccaacctcagaggacaaaggtcaccatctttcagtctatgggt
gacccactggtatacggaaaaatctacagcagcaatgacccaaaaatggaggaggacgtt
tctgacgtgcaccttattcacccaccattccttcttggttcgaaggtagatgctgatcgg
tttttgtctcagtacaaggatgtttacgagacggatttaaagtgtgaggtgaagattttg
cacagctccaacaatgtgggagcccaaggccaactctctccaacaagggagacagaggtg
gatggtttctcagcattggtccagtcctcagtgttgggaaagggagttaagcacaaacct
cccccgattaaactgccatctggttcttccagcagctcctcaggtaatccttacagtaca
caagcacccagtggccatttgaagtgtccaacccctcctccaaacaagagccaatctttg
tcgcgtaagcactccatcgagctgagccaggtgggcctgctctcccccgctgcgctgtct
cccatgcaaagatctggaacacccaagccatctacacccaccccaaccaacaccccatgc
tctacacctcacccagtggacattcagggtaccacaccctcagtgacacccaccccccag
gacccaactatgcctcagcagcagacactgcttgcccccttttcccagcaacaaatggcg
ctgcctgtcatgactataccactgcccacctccatcagcacaggcaccacttcctcgcaa
gtcatgaccaaccctgctggcctcaactttatcaatgtggttggctctgtctgcagtcct
caggctctaatgactggctctaactccatgctgggttgtagtcctggaataaacctgagt
ggaattttgcctccaggaggcctgatgcccagtgcacttcctgccatgcagcctgcagct
tctgcaggtgcaccatttggattgaacaatacccaaagcttgaggccgctcaatcttctt
cagatccctgcaacaccattgattttcaaccctttacagcaacaacagatctctcagttc
tctccccaacagcagagcagtcagtctgctacttccagtccccagcagcagaatgattcg
actgaacagggactgacagctgagcagggccttgcagcacaacagaccgctgtcatcaac
ctcactggggtggggggattcatgccttcacagacagttctgtcccagctgggttgtggt
ctggagggctctgggtccagcctgccgtccccgaggctccagcagcagcaccagccacag
attcaattgcaattcttgcaacaccaaatgcagcagcaaatggctatggcagcaggggcg
gggcctcaagcaacgctgccacggcaacattccggcaaccaaccaagaagtaagaggaag
cgcagcatgccccaacccctccccaaatcatga
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