Silurus meridionalis (southern catfish): 124393395
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Entry
124393395 CDS
T08004
Symbol
ehd1b
Name
(RefSeq) EH domain-containing protein 1b
KO
K12483
EH domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124393395 (ehd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124393395 (ehd1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124393395 (ehd1b)
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124393395 (ehd1b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124393395 (ehd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5600
EH
EHD_N
Dynamin_N
MMR_HSR1
GTP_EFTU
EF-hand_1
EF-hand_7
AAA_22
AAA_16
Roc
EF-hand_5
EF-hand_6
RcsD_ABL
TsaE
AIG1
PIN_5
AAA_28
Motif
Other DBs
NCBI-GeneID:
124393395
NCBI-ProteinID:
XP_046717152
LinkDB
All DBs
Position
11:23302217..23311525
Genome browser
AA seq
532 aa
AA seq
DB search
MFSWASRDGKKKEPELFQTVADGLKRLYRTKLLPLEEAYRYHDFHSPALEDADFDNKPMV
LLVGQYSTGKTTFIRHLLENEFPGMRIGPEPTTDSFIAVMHGEQDGLVPGNALVVDPKKP
FRKLNAFGNAFLNRFVCAQLPNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAER
VDRIILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQISTQQLMRVYGALMWSLG
KIVNTPEVLRVYIGSFWTQPLLVPDNRRLFEAEQHDLFRDIQSLPRNAALRKLNDLIKRA
RLAKVQAYIISALKKEMPNMFGKENKKKELIADLGEIYTKIEKEHQISPGDFPKLSKMQE
LLVSQDFTKFQALKPKLLECVDDLLENDIAKLMSLVRQEELTTPTAAVQGGAFEGVSVGP
FGGGYGEGVSEGIDELEWVVQKDKHTYDEIFYTLSPINGKVSGAMAKREMVKSKLPSTVL
GKIWKLADVDRDGFLDDEEFALANHLIKVKLEGHELPAELPSHLMPPSKRAQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctgggccagcagggacggtaagaagaaagagccggaactgttccagacggtg
gcggacggactgaagcggctgtaccggactaaactcctgccgttagaggaggcgtaccgc
taccatgacttccactccccggctctggaggatgcggacttcgacaacaagcccatggtg
ctgttagtggggcagtactctaccgggaagaccacctttatccgacacctactggagaac
gagttccccggcatgcggatcggacccgagcccactaccgactccttcatcgcggtgatg
cacggagagcaggacgggctcgtgcccgggaacgcgctggtggtggatccgaaaaaaccg
ttccgcaaactcaacgctttcggaaacgccttcttgaacaggtttgtgtgtgctcagctg
cccaatccagtgttggagagtatcagcatcatcgacacacctggaattctgtctggagag
aagcagaggatcagtcgaggttacgactttgcggcagtgctggagtggtttgctgagcga
gtggaccggatcattttgctgtttgatgcccacaagctggacatttcagacgagttctcg
gaggtgatccgtgctctgaagaaccacgaagacaaaatgcgtgtggttctcaacaaggct
gatcaaatcagcacacagcagctaatgcgggtgtatggcgccctcatgtggtctcttggt
aaaatagtgaacactccagaagtgctgcgtgtctacatcggctcattctggacgcagccg
ctgctggtgcctgacaaccgcagactgtttgaggccgagcagcacgacctgttcagagac
atccagagtttacctcgcaacgcagcactccgcaaactcaacgatctcatcaaaagggct
cgcctcgccaaggtgcaggcatacatcatcagtgccctgaagaaggagatgccaaacatg
tttggtaaagagaacaagaagaaggagctgattgctgatctgggagaaatctacaccaag
atcgagaaggagcatcagatctctcctggagatttccccaaactttcaaaaatgcaggag
ctgctggtgtcacaggacttcactaaattccaggctctgaagccaaagttactggagtgt
gttgatgacctgctggagaacgacattgcaaagctcatgtcactggtgcggcaggaagag
ttgaccacgcccactgctgcggtgcagggtggggcctttgagggcgtgtcagtggggcct
tttggcggtggttacggtgagggtgtgtctgagggcattgacgagttggagtgggtggtg
cagaaagacaagcacacctatgatgagattttctacacgctctcacccatcaacggaaaa
gtgtcgggtgctatggccaagcgtgagatggtcaagtccaaactgcccagcaccgtgctc
ggaaagatctggaaacttgctgacgttgacagggacggttttcttgatgatgaggagttt
gcattagctaatcacctgatcaaagttaagcttgaaggtcatgagttacctgcagagctg
ccttctcacctgatgcctccatccaaacgtgctcagtag
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