Silurus meridionalis (southern catfish): 124393411
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Entry
124393411 CDS
T08004
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124393411 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393411 (setd1ba)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
124393411 (setd1ba)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124393411 (setd1ba)
HMT complexes
COMPASS/SET1 complex
124393411 (setd1ba)
COMPASS/SET1 complex (yeast)
124393411 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
124393411
NCBI-ProteinID:
XP_046717177
LinkDB
All DBs
Position
11:22275491..22293148
Genome browser
AA seq
1728 aa
AA seq
DB search
MSRPGERSRGDEDHGRRQSSSLANGGGSGGGGGTDSSGSVEKRREHHWRSYKLIIDPALR
KGSHKLYRYDGQHFNIPNPGIPPVDMVRDPRIGRLWTKYRETDLPVPKFKIDDCYIGRVP
PKEVTFARLNDNIREGFLTDMCQKYGEIEEVEILYNPKNKKHLGIAKVVFGSVKAAKDAV
QNLHNTSVMGNIIHAELDPKGENRLRYVQRLINGTFTPLTVPVGDEEPCEVSPRCLAEAL
LSTCEPLRRLSESGSTSMSTPQSVDTAYSSLRQDSTPQSQTTPITPRPSGTPFSQDSAYS
GRQATPTFQRSRRHETKFQDAYNRRPERRYVHGGYRNNAEKPNPPPEAPPPPVTPNFKPA
FSPYQPPMPPVYPPAEPQFHQSDYRQPPPQAPLPTTPEFHPEPPPMPEETRPATPTSCPS
PSSGTPTLEAERHSLDSRIEMLLKEKRTKLPFLSEGGDSDGEVRMEGSPISSSSSQLSPI
PPSSSATLRTSRPPSTGLEDISPTPLPDSDDDEPVPGTASATHHPQSASPSNTHNTGGPH
TPVDNVDTGNQSSGEDMEISDDEMPGTPLSSDCSKAIVVNSAVSPITPQSMSLPPPGFPP
LPPHQSAYTIHPAHLPPHLSAPHPMMPPMHPYPPAIMGMVPMELISCFPQWGNVHMSFQM
QTQMLSRMAQCQGGYAYPQFPGGTASANASAMQFGRPYPPLSMASAPSGGHGQPWPLPSV
PKFNPSVPPPGYEPKKEDPHKATVDGVLTVIVKELKAIMKRDLNRKMVEVVAFRAFDEWW
ERKERSAKATSTPVKTGEGKEDDKERVKRIEKPPTLVEAWCKGEGLGFEGLGLGIGLRGG
IRLPSFKVKRKEPPDPVSTGDSKRARPSMPVDDELEDEESERADAPSDGTRVDDASSTKR
RHARPVELDSEGEEEEDEEEEETGRDESSVSEREDEAEVDVSERLSSSKEVKKDPDDEAE
AVNESESESSSSDSSDEGSESSSGSQSDSSDSDGSSDYESSSDESGDEEEEERKASDVAM
DTEDEEKEVVSSSSSSSSSSPLLSSEEEEEAETKAPSTPAAPVEEESEAARLEVEEAASA
VTVAQDNLWKVSPKRIKEEPDIDLEVRKTEPQIECTGTLRPPTPPHAEDEEVPRTPGREV
PGPSEAETPTVHRSLPPDHSVLPHPRLSSDEDVPRTPGRDLPCRLSKSQSSETAPVTPTI
PATPNTPSEAPPTGSSVSLNSPFPYPLLSAGIPHTPGRDLTFTPVFPDSPAILSLQRTSS
SEKQLFKEPGSATSCSSYPLPVVPCLDAAMVPTTPQVPHIQLSVSDDSASSKKKPGRPRK
PAVVEPEDVQEPSEAMMPLTPDLPVKDLLHQCEVLRGADVSTALAPKEREELAAHKHVEI
KKEIKEEEHDMEHTVLLEEPLQKTRGQRRSWEELLSSMHLPLRSPPRRSFLPRSEFEEMT
ILYDIWNDGIDEEDVRYLKITYEKMLQQDNGHDWLNDTLWVPHPPTSSVSLPGSKKKRRD
DGMRDHVTGCARSEGYYKIDKKDKIKYLNSTRLQSDEPDKDMQGRMIPAQPHASTRAGSE
RRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIRFCKSHIHDWGLFAMEPIAADEMVIEYVG
QNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVIT
VESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacccggagagagaagcaggggagatgaagatcacggcagaaggcagagttca
agtctggcgaacggcggcggtagcggtggtggtggcggtacggatagcagcggctcggtg
gagaagcggagagagcaccactggagaagttacaagttgatcattgacccggcgctcaga
aagggttctcacaaactctaccgatacgatggacagcatttcaacattccgaaccctgga
atcccccctgtggacatggtccgggaccctcggatcggtcgtctgtggaccaagtacaga
gagaccgaccttcccgtgcccaagttcaagatcgacgactgctacatcggacgcgtgcct
ccgaaggaagtaaccttcgcgaggctgaacgacaacatccgggagggtttcctcaccgac
atgtgccagaaatacggcgagatcgaggaggtggaaattctgtacaatccgaaaaacaag
aagcacctgggcatcgcgaaagtggtgttcggctccgtgaaagcggccaaggacgcggtg
cagaacctgcacaacacctctgtgatggggaacatcatccacgcagagctcgaccctaaa
ggtgagaatcgtctgcgttacgtccagcggctgataaacgggaccttcacacccctgacg
gtgccggtgggagacgaggagccgtgtgaggtttcaccacgttgcctggccgaggcgctg
ttgtcaacctgtgagccgttacgtcgcctctctgaaagtggctccaccagcatgagcacc
ccacagtccgtagacacggcatattcaagtcttaggcaggattctacaccccaatcccag
accacgcccatcacgccacgcccttccggcacacccttctctcaggactccgcctactct
ggcaggcaggctacgcccaccttccagcgctcccgccggcacgagaccaaattccaggat
gcatacaaccgtcgtccggagaggcgttacgtccacgggggttaccgtaacaatgcggag
aagccgaatccgccacccgaagctccacccccaccggtcacacccaattttaagcctgcg
ttctcgccataccagccccccatgccccctgtttacccccctgccgagccacaattccac
caatcggattacagacagcctcctcctcaagctccactccctactacgccagaatttcac
ccggagccgccccctatgcccgaagaaacacgtccggccacgccgacttcgtgtccctcg
ccttcctcgggcacacccactctagaggcagagcgccatagtctggactcgcgcatcgag
atgctgctaaaggaaaaacgcacaaagttgccattcctgagcgaaggtggagactcagat
ggagaggtgcgcatggagggcagtcccatctcgtcctcgtcctctcagctgtcccccatc
cctccttcttcttctgccacccttcgcacatcccgcccaccaagcaccgggctcgaggat
atcagcccaaccccgctgcccgactccgacgatgacgagcccgtcccaggaactgcctcc
gctacgcaccacccacagagcgcctcgccttcaaacacgcacaataccgggggaccacat
accccagtggacaatgtggatacgggtaaccagtcgtcgggggaggatatggaaatctca
gatgatgagatgccaggaacacccctctccagcgactgctctaaggccatcgtagtgaac
tcggctgtgtctccgataactcctcagtccatgtcgcttcctccgcctggcttcccccct
ctaccccctcaccagtctgcgtacacaattcaccctgctcacttgcccccacatctttcc
gccccacaccccatgatgcccccaatgcacccatacccaccagccattatgggcatggtg
cccatggagctaattagctgttttccgcagtggggaaacgtgcacatgtcattccagatg
cagacgcagatgctgagtcgcatggcgcagtgccagggcggttacgcttacccccagttc
ccagggggtacggcgtcagcaaacgcaagtgccatgcagttcggtcgtccatacccaccc
ttgtccatggcgagcgcccccagtggtggacacgggcagccctggcctttacccagcgtg
cccaagtttaacccgtcggtgccaccacctggttatgagccgaagaaagaagacccacac
aaggcgacggtggacggagtgcttacggtcattgtcaaagagctgaaggccatcatgaag
agagacctcaaccgcaagatggtggaagtggtggccttcagggcctttgatgaatggtgg
gagagaaaggagcgttctgccaaggcgacgtccaccccggtgaagacaggtgagggtaag
gaagacgacaaggagagagtgaagcggatagagaagccacccactctggtggaggcgtgg
tgtaaaggcgagggtctcggtttcgagggattggggctggggatcggcctgcgaggtggc
attcgccttccgtccttcaaggtgaagaggaaagagcctccagaccccgtctctaccgga
gatagtaaaagagctcggccgtctatgcctgtagatgatgagctggaggatgaagagtcg
gaaagagccgacgccccctcagacggcacccgggtggacgacgcatcctccaccaagcga
aggcacgcccgccctgtggagctcgacagtgaaggagaggaggaagaggatgaggaagag
gaggagacgggcagggacgagtcgtctgtgtctgagcgagaggatgaggctgaggtagac
gtctctgagagactatcctcaagcaaggaggtcaaaaaggatcctgatgatgaagctgaa
gcagtgaatgagtctgagagcgagagcagttcttctgactcgtctgatgaaggatccgag
agctcatcgggttctcagtccgactcctctgacagtgacggctcctcagactacgagtct
agctcagatgagtccggggacgaggaagaggaggagagaaaagcgagtgatgtagccatg
gacactgaggatgaagaaaaggaggttgtgtcctcgtcatcgtcgtcttcctcgtcctcg
cctctgttgtcctctgaggaggaggaggaggcggagacgaaggctcccagcacgcccgca
gctccggtggaagaggagagcgaggcggcacgactcgaggtggaggaggcggcgagcgcc
gtcactgtcgctcaggacaacctgtggaaggtttctcctaaaagaattaaagaagagccg
gatattgatctggaggtaagaaagacagaacctcaaattgagtgcacggggaccttaagg
cctccaactccaccgcatgcggaggatgaagaggtgcctcgaactccaggtcgtgaggtc
cctggcccttcagaggctgagacgcccactgttcaccggtccctgccccctgatcattct
gtcctcccgcacccacggctctcgagcgacgaggatgttccccgcacaccgggccgagac
cttccctgccgtcttagcaaatcacagagcagtgaaacagcacctgtgacccctaccata
cctgctacacccaacacacccagtgaagccccgcccacaggaagcagcgtgtcactcaat
agcccgttcccttacccgctgctcagtgcgggcatccctcacacgcctggccgggacctg
accttcactccggttttcccagactcccctgccatcctttctcttcaaaggacatcctcg
tctgaaaagcagctgttcaaagagcctggcagtgccacttcctgttcctcatacccgctt
cccgttgttccctgtttagatgccgctatggtgccaactactccgcaggttccacacata
caactttctgtatccgacgattccgcgtcctcaaagaagaaacccggccgacccagaaag
cctgctgttgttgaacctgaggatgtccaggaaccttctgaggcaatgatgccacttact
ccagacctcccggtgaaggatctgttacaccagtgtgaagtgctgcgaggggcagatgtt
tccacagcactggctccgaaggagagggaggaactggctgcacacaaacacgtggaaata
aagaaggaaataaaggaagaagagcacgatatggagcacaccgttctcttggaagagccg
ctacagaaaacgcgtggacagaggcggagctgggaggagcttctttcctccatgcacctg
cctctaaggtcaccgccacggcgcagcttcctcccgcggtccgagttcgaagagatgacc
atcctgtatgacatctggaacgacggcatcgacgaggaggatgtacgctatctcaaaatc
acctatgaaaaaatgctgcagcaggataacggccatgactggctcaacgacacgctctgg
gttcctcaccctcctaccagcagcgtcagtcttcctgggagcaagaaaaagcgccgggac
gacgggatgcgtgatcacgtgaccggctgtgctcgtagcgagggctattacaaaattgac
aaaaaggataaaattaaatacctgaacagtacgaggctgcagtcagacgagcctgataaa
gacatgcagggccggatgatcccggctcagccccacgcctcgacccgagctggttcagag
agacggtccgaacagcgccgcctgctgtcctcgttcagctgcgacagcgacctgctcaaa
ttcaaccagctcaagttccgtaagaaaaagatccgattctgtaaaagtcacatccatgac
tggggtctgtttgctatggaacccatcgccgctgacgagatggttattgagtacgtcggg
cagaacatcagacaggtgatcgcggacatgagggagaagcgttacgaggaggaaggcatc
ggcagcagctacatgttccgcgtcgatcacgacaccatcatcgatgctacaaagtgtgga
aacttcgctcgctttatcaaccatagctgcaatccaaactgctacgccaaggtgattacg
gtggagtcccagaaaaagatagtaatctactcgcgccaaccaatcaacgtgaacgaggag
attacctacgactacaagttccccatcgaggacgagaagatcccatgtctgtgtggagct
gagaactgccggggaacgctcaactaa
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