Silurus meridionalis (southern catfish): 124393429
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Entry
124393429 CDS
T08004
Symbol
itga2.2
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03271
Virion - Rotavirus
smeo04145
Phagosome
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04810
Regulation of actin cytoskeleton
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
124393429 (itga2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124393429 (itga2.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124393429 (itga2.2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124393429 (itga2.2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124393429 (itga2.2)
04810 Regulation of actin cytoskeleton
124393429 (itga2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124393429 (itga2.2)
04515 Cell adhesion molecules [BR:
smeo04515
]
124393429 (itga2.2)
04090 CD molecules [BR:
smeo04090
]
124393429 (itga2.2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124393429 (itga2.2)
Exosomal proteins of bladder cancer cells
124393429 (itga2.2)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin alpha subunits
124393429 (itga2.2)
CD molecules [BR:
smeo04090
]
Proteins
124393429 (itga2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
Integrin_alpha
DUF961
Motif
Other DBs
NCBI-GeneID:
124393429
NCBI-ProteinID:
XP_046717216
LinkDB
All DBs
Position
11:complement(1319233..1349602)
Genome browser
AA seq
1176 aa
AA seq
DB search
MELWTRALLLLLHSWCIQHSQGFNVGTSGAKIFSGPKVDEFGYTVQQFSTAEGKWLLVGA
PWRGYTQNRKGDVYRCGITGTTCEKLNLQNSVNIPNVQNINVNMSLGLTLMRKPKNNGFM
TCGPLWAQACGTQYFSTGVCAEVSSQFSPQTVFSPALQTCGGPMDIAIVLDGSNSIYPWP
PVVNFLKKLLGHLDIGPQQSQVSIIQYGVYPVMEFNMNTYKTRDSIVDAASKITQRGGTE
TNTFGAIEYARTNAFLASNGGRPGASKVMVVVTDGESHDNSKRDKVIPACEKDHITRFGI
AVLGYYIRNNIDSTKLVEEIKSIASNPSDKFYFNVSAEEALLEIAGTLGDRIFNIEGTGI
GGEFQMEMSQVGFSAHKTKNEDEMMLGAVGAYGWTGTVVHKTAQKSEIFPKETFERILED
KNHSSLLGYAVTTLYSDSTEYFVAGAPRSNHTGQVVVYTLNQQRKPEIRHSQRGDQIGSY
FGSVLCPLDVNRDGVTDILLVGAPMYMSDEKKEMGKVYVFSITNGFLSSQGFLEGSSPLE
NARFGMAIAAAPDLNQDNLNDVVVGAPLEENGQGALYIFNGEARSVRKQSSQKILAMKLD
PMLRYFGRSLDASEDLNGDSIPDVSVGSYGKVFQLWSRAVALVTAKVTFNPDRISVLSKP
CTLNGRMVSCFKAKICLRATFKPLNQVGPAAIKYNMTLDADLKSSRVSRAHFINSERVIQ
HDVSVSTAETCEEHQVNVQEALDLVNPIAVRVDIRLQQPDSNPVLDAFSPTAWEFFIPFS
KDCGTDEVCYSDLVLSVQRDPPTSSLLVSNNNRRLVLFVTVMNRKENAYNTRVTARYSSN
LFYSSVSQPSDGTEVKCTSSQDTELVACQVGYPALKTDQSVTFEISFDFNLAQLQKEVKV
VFEAQSESKEETPEDNTETLMISIQYQTEIILSREANLDVYLLEEKDEIINPIKTYSDIG
PEFKFSLKVSGAAFPVSLVYMDVSLPTSTKSGNQLLYITSVEATPQRDVQCDINGLIDPF
NIGQKEYTAKFTEKSFRGTSHLNCASAVCKQLKCVLKDMSVKSEYIVSVSARIWNGTFLK
ADFQSVVLNVNAQIKTSQNDLLVIAHKEVTVDVTVSKPGAKGDVPVGVIVGSVIGGLLLL
AAAVAGLWKLGFFKRKYQQLGRNDEAAETEGLQENA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtggacgcgcgcgctgctgctgctgttacacagttggtgtattcaacactct
cagggatttaatgtgggaacatcaggagccaaaattttctctggcccgaaagtagacgag
tttggatacacggtgcagcagttcagcactgccgagggaaaatggttattagtcggagct
ccttggagaggctacacccagaacaggaaaggagatgtgtatagatgtggtattacagga
actacctgcgagaaactcaacctacagaactctgtcaacataccgaacgtacagaacatc
aacgttaacatgagtctgggtctgaccctgatgcgaaaacccaaaaacaacggatttatg
acatgcggtcctctctgggctcaggcttgtggtactcagtatttctccacgggagtgtgt
gcagaagtgagctctcagttcagtccacaaacggtgttttctcccgctctacaaacttgc
ggtggcccaatggacatcgctattgttctggacggatcaaacagtatttatccctggcct
cctgttgtgaattttcttaagaagctcttaggacaccttgatatcggacctcagcaatct
caggtcagcatcattcagtacggcgtctatcccgtgatggagttcaatatgaacacgtat
aagaccagagattcgatcgtggatgcagcttcaaagattactcagagaggtggaaccgag
acgaacacgttcggagcgatcgaatacgccaggacaaacgcttttctggcgtcaaatggt
ggacgtcccggagccagtaaagtgatggtggtggtgactgatggagagtcacatgataac
tccaagagagacaaggttattccggcgtgtgagaaggaccacatcactcgcttcggcatc
gctgtgctcgggtactacataagaaacaacattgacagcacaaaactggttgaggaaatc
aagtcaatagccagcaatccttctgataaattctatttcaatgtgtctgctgaagaggca
ctgctggagattgcaggaactctgggagatcggatcttcaatatcgaaggcacaggtata
ggtggtgaatttcagatggaaatgtcgcaggtcggattcagtgcgcacaagaccaagaac
gaggacgagatgatgctgggggccgttggagcgtacggatggaccggaaccgtggtgcat
aaaactgctcagaaatcagagattttccccaaagaaacttttgagcgaatacttgaagat
aaaaaccacagttccctcctgggatacgcagtgactacgctatatagtgattccactgag
tactttgtggctggtgcgccccgctccaatcacaccggtcaggtggtggtgtacacgctg
aatcagcagagaaaacctgaaatccgacactcacaaagaggagatcagatcggatcgtac
ttcggaagcgtgctctgccccctggatgtgaatcgtgacggtgttacggacattctcctg
gttggagctccgatgtacatgagcgatgagaagaaggagatgggcaaagtgtacgtcttc
tccattaccaatgggttcttgagtagccaggggttcctggaaggttcttctccactggag
aacgcccgattcggaatggccattgccgcagctccggacctcaaccaggataacttaaat
gatgtggtggttggggcaccgctggaggagaacggccagggagctctttatatttttaac
ggagaagcacgaagcgtcaggaagcagagctcacagaaaattcttgccatgaaactggac
ccgatgttgaggtacttcggacgttctttagatgccagtgaagatctgaatggagactca
atcccagacgtctcagtggggagttatggaaaagtgtttcagctctggtccagagcagtg
gcgttggtgactgccaaggtcacgttcaacccggaccggattagcgtcttgagcaaaccg
tgcaccctcaatggacggatggtttcctgttttaaagccaaaatctgcctgagggcaacg
tttaaaccgttaaaccaggttggacctgcagcgattaagtacaacatgaccctggacgct
gacctgaagtcgtcccgagtctcaagggctcacttcattaactcggagcgagtaatccag
catgacgtcagcgtctccacagctgagacgtgtgaggaacatcaggtgaacgttcaggaa
gcgcttgatctcgtcaaccccattgccgttcgagtcgacatcagacttcagcagccggat
tcaaaccctgtcctggacgccttcagtcccaccgcatgggagttttttatcccattttct
aaagactgtggtactgatgaggtgtgctacagtgacctggtgttaagcgtgcagagagat
ccgcctaccagctccttgttggtgagtaataacaacagaagattggtgctgttcgtcacg
gtgatgaacaggaaggaaaacgcgtacaacacccgagtgacagcgcgttactccagcaac
ctgttttactcctccgtttcgcagcctagcgatggtactgaggtcaaatgcacctccagt
caagacactgaattggtcgcgtgtcaagttggatatccagcgttaaagaccgaccagtcg
gtgacattcgagatcagttttgacttcaatctggctcagttacaaaaggaagtcaaagtg
gtttttgaagcccagagtgaaagtaaagaggaaactccagaagataacactgagacgttg
atgatctctatccagtaccagacagagatcatcctgagcagagaagcaaacctggatgtg
tatttacttgaagaaaaggatgaaataataaaccccataaagacgtacagtgacatcggt
ccagagttcaagttcagtctcaaggtatctggagcagcttttccagtcagtttggtttac
atggatgtatctctgcccacgagcaccaaatcagggaatcagctgctgtatataacatca
gtcgaggccacaccgcagcgtgatgttcagtgtgacattaatgggctgatcgacccgttt
aacatcggacagaaggaatacactgccaaattcactgagaagagcttcagaggaaccagt
cacctgaactgtgcctcagccgtatgtaagcagctgaagtgtgtgctgaaagacatgagc
gtgaaaagcgagtatatcgtcagcgtgtctgcacgaatctggaacggaacatttctgaag
gctgatttccagtcggtcgtattaaacgtgaacgctcagatcaaaacgtctcaaaatgat
ctacttgtcatcgcccacaaagaagtgacggtggatgtgacggtcagtaaaccgggtgct
aaaggtgacgtccccgtgggcgtgatcgtggggagtgtgatcggaggattactcctgctg
gctgctgctgtcgcagggttgtggaagctcggcttcttcaagcgtaaatatcagcagctg
ggcagaaacgatgaggcagcggaaacagaaggactgcaggagaacgcgtga
DBGET
integrated database retrieval system
