Silurus meridionalis (southern catfish): 124393434
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Entry
124393434 CDS
T08004
Symbol
unc5cb
Name
(RefSeq) netrin receptor UNC5C isoform X1
KO
K07521
netrin receptor unc-5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124393434 (unc5cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124393434 (unc5cb)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124393434 (unc5cb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPA
Unc5_NetrinR_N
ZU5
Death
Ig_3
I-set
TSP_1
TSP1_spondin
Ig_2
ig
VEGFR1-3_N_Ig-like
TSP1_CFP_C
TSP1_ADAMTS
DUF6724
Motif
Other DBs
NCBI-GeneID:
124393434
NCBI-ProteinID:
XP_046717220
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All DBs
Position
11:complement(8692183..8845004)
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AA seq
958 aa
AA seq
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MRLRWRISPETVMGKTSAKIARWTACLPRIITPILLLAVFTGTSRAQDDDYLGLGDLPET
FPSDPPEPLPHFLMEPEEAYIVKNKPVNLYCKATPATQIYFKCNSEWVPQKEHTVEERVD
ETSGLVVREASIEITRQQVEELFGLEDFWCQCVAWSSAGTTKSRKAHVRIAYLRKSFDQE
PLGKEVSLEQEVLLQCRPPEGVPAAEVEWLKNEEVIDPADDRNFYITIDHNLIIKQARLS
DTANYTCVAKNIVAKRRSTTATVIVYVNGGWSTWTEWSVCNSRCGKGFQKRTRSCTNPAP
LNGGAICEGQAIQKLACNPLCPVDGLWTEWSKWSTCGTECTHWRRRECSAPAPKNGGKDC
EGMVLQSKNCTDGLCMQSSLYQKSSEPKGKNDDYGYPSAPSTDDVALYVGIVIAVIMCLV
ISVIVALFVYRKNHRDFDSDIIDSSALNGGFQPVSIKTARTADLLTAPPDLTSAAAMYRG
PVYALHDVADKIPMTNSPLLDPLPNLKIKVYNSSGTVTPQDDLSDFSSKLSPKLAHSLID
NDTMGRHTQSLMRSRDPSCTAFGSFNSLGGHLIVPNSGVSLLVPAGAIPQGRVYEMYVTV
HRKETMRPLVDDTQTVLSPVVSCGPPGALLTRPVVITMHHCTEADNDDWLIQLKSQSQHG
QWEDVVVVGEENFTTPCYIQMDVEACHILTETLGTYCLVGQSVSAASAKRLKLAVFGPVT
CTALEYNIRVYCLDDTQDALKEVLQMEKQMGGKLLDEPKSLNFKDSTHNLRLSLHDVPHT
HWKSKLLAKYQELAFQQVWSGSQRNLHCTFTLERFSAATVELACKLCVRQVEGEGQIFQL
NTTLSEDSQCIDTSLLDPASNITTLVGPNAFRIPPSIRQKLCSSLDAPQTRGNDWRMLAH
KLNLDRYLNYFATKSSPTGVILDLWEAQHFPDGNLNRLAAVLEEMGRHENIVPMATEH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccgctggcggatttctcccgaaactgtcatggggaaaactagtgcaaagatt
gcgcgatggactgcatgcttaccgcgcatcattacaccaattttactgctcgccgttttc
accggtaccagcagagctcaagatgatgactacttggggttgggcgatcttcccgagact
tttccttcagacccaccagagcccctcccccacttcctgatggagcctgaagaggcctac
attgtcaaaaacaagcccgtcaatttatactgcaaagccacgcctgccacacagatctac
tttaagtgcaacagcgagtgggttccccagaaggagcacacggtggaggagcgtgtggac
gagacctccggtctggtggtgagggaggcgagtatcgaaatcacgcggcagcaggtggag
gagcttttcggccttgaggatttctggtgccagtgcgtggcctggagctctgccgggacc
acgaagagccgcaaggcccacgtccgcattgcctatctcagaaaatcctttgaccaagag
cctttggggaaagaggtgtctctcgaacaggaagtgctcctccagtgccgtccacctgaa
ggagtccctgctgcagaggtcgagtggctgaaaaacgaagaggtcattgaccctgcagac
gatcgtaacttttacatcactatcgaccacaacctgatcatcaaacaggctcgtctgtcc
gataccgctaactacacctgtgtcgccaaaaacatcgtggccaagaggaggagcaccaca
gccactgttatagtctacgtgaacggaggctggtcaacatggaccgagtggtcggtgtgt
aacagtcgttgtggaaaaggcttccagaaaaggactcggagctgcaccaacccggcgcct
ctcaacgggggagccatatgtgaaggccaagccattcagaaactggcctgcaacccatta
tgtccagtggacggtttgtggacagaatggagtaaatggtcaacatgtgggacagagtgc
acccactggagaaggagagagtgcagcgcaccagctccgaaaaatggtggcaaggactgt
gagggcatggtgcttcaatccaagaattgtaccgacggcctgtgcatgcagagttcccta
tatcagaagtcctctgaaccaaaaggcaagaatgatgattatggatatccatcggcccca
agcacagatgatgtggctctctatgtgggcattgtcattgccgtaatcatgtgcttagtc
atctccgtcatcgtagccctcttcgtttaccgcaaaaaccatcgcgacttcgactcggat
atcatcgattcctcggctctgaacggcggcttccagccagtcagcatcaagaccgctcgc
acagccgatctcctgaccgcaccccctgacttgacctcggcagcggccatgtaccgcggc
cccgtctatgccctccacgacgtggctgacaaaatccccatgactaactctcctttgctc
gaccccttgcccaacctgaagatcaaagtgtacaactcatcaggcacggtgactcctcag
gacgatctttccgacttctcatccaaactttctcccaagttggcacactcactcatcgac
aacgacaccatgggacgacacactcagagtctgatgcgctcccgagacccgtcctgcacc
gcctttggctccttcaactccctcggaggccacctcatcgtacccaactcaggcgtgagc
ttgttggtgccagcaggtgctatccctcagggacgagtgtacgagatgtacgtgacggtg
cacaggaaggagacaatgagacctttagtggacgacactcagactgttttgagcccagtg
gtgagctgtgggcctcctggagctctgctcacccggccggttgtcatcaccatgcaccac
tgcactgaagctgacaatgatgattggcttattcagctgaagagccagtcgcagcacgga
caatgggaggacgtggtggtggtaggggaagagaacttcaccaccccctgctacattcag
atggacgtggaggcgtgtcatatcctgaccgagacgctggggacgtactgcttagtgggt
cagtcagtgagcgcagccagcgctaagagactgaagctggccgtgttcggccccgtcacc
tgcactgccctcgagtacaacattcgcgtgtactgtctggacgacacgcaggacgccctc
aaagaggtgctgcagatggagaagcagatgggtgggaagctcctggatgaacccaagtcc
ctaaactttaaggacagcacacacaacctgcgtctgtcgctgcacgacgtcccgcacaca
cattggaagagcaaactgctggccaaataccaggagctggcgtttcaacaagtatggagc
ggttctcagaggaacctgcactgcacctttactctggagcgcttcagcgctgcgaccgtg
gagctggcctgtaaactgtgtgtgcgccaggtggagggcgagggccagatcttccagctc
aacaccacgctgtccgaggactcacagtgtattgatacgtctctgctggaccctgcgagt
aacatcactacgctggtgggccccaacgctttccgaatccctccatccatccgccagaaa
ctgtgcagcagcctggacgcccctcagacccgcggcaacgactggagaatgctggcacac
aaacttaacctggacaggtatttgaactactttgccactaagtccagtccaaccggtgta
attttggatctgtgggaagctcagcacttccccgacggcaacctgaaccgattggctgcc
gtgctggaagagatgggtcgccatgagaacattgtacccatggcaaccgagcactga
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