Silurus meridionalis (southern catfish): 124393476
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Entry
124393476 CDS
T08004
Symbol
hnrnpd
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein D0 isoform X1
KO
K13044
heterogeneous nuclear ribonucleoprotein A/B/D
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124393476 (hnrnpd)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
124393476 (hnrnpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
CBFNT
RRM_3
Nup35_RRM_2
NID
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
124393476
NCBI-ProteinID:
XP_046717301
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All DBs
Position
11:complement(20859532..20867019)
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AA seq
310 aa
AA seq
DB search
MDEQYIGEDPTMKMEEDEEASVEGQMQAVSDGGPGESEGSKIDASKNEEDEGKMFVGGLS
WDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKESDSVEKVIQQKEHKLNGK
VIDPKKAKAMKSKEPVKKIFVGGISPDTPEEKIREYFHAFGEVESIELPMENKTNKRRGF
CFITFKEEEQVKKIMEKKYHNIGLSKCEVKVAMSKEQYQQQQWGGRGGFSSRVRGRGGPN
QNWNQGYGNYWNQGYGNYGNYGYNNQGYGGYGGYDYTGYNYYGYGDYSNQQSGYGKSPRR
GGHQNSYKPY
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagtacatcggagaagatccgactatgaagatggaggaagatgaagaagcc
agcgtggaagggcagatgcaggcggtcagtgatggaggtcctggagaaagcgaggggtcg
aagattgatgcgagtaaaaacgaggaagatgaagggaaaatgtttgttggaggcctgagc
tgggacacaacgaagaaggacttgaaagattacttcgccaagtttggggaggtcgtagac
tgcactttaaagctggatccaatgaccggtcgatccagaggctttggctttgtactgttt
aaagagtccgatagtgtggaaaaggttattcaacaaaaagaacacaaacttaacggaaaa
gtgatcgaccccaaaaaagcaaaagctatgaagtctaaggaacctgtgaagaagatcttt
gttgggggcatttcaccagacacgcctgaagagaagatcagagagtactttcatgctttt
ggagaggtggagtctattgagttaccgatggagaacaaaacaaataaaagacgaggattc
tgtttcatcaccttcaaagaggaggaacaagtaaaaaaaatcatggagaagaagtaccat
aatattggccttagcaagtgtgaagtcaaagtggccatgtcaaaggagcagtaccagcag
cagcagtggggtggaagaggtggcttctcttctagagttcgtgggagaggaggacctaat
caaaattggaaccaggggtacggaaactattggaatcaaggatatggaaattacggaaac
tatggctacaacaatcaaggctatggtggatacgggggctatgattacacgggttacaac
tactacggctatggtgactacagcaaccagcagagtggttacggcaaatctccaaggaga
ggtggccatcaaaacagttacaagccatactag
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