Silurus meridionalis (southern catfish): 124393513
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Entry
124393513 CDS
T08004
Name
(RefSeq) WD repeat-containing protein 70 isoform X1
KO
K24752
WD repeat-containing protein 70
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124393513
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393513
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124393513
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124393513
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
124393513
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
124393513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
Ge1_WD40
PEP5_VPS11_N
DUF4692
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD40_RFWD3
WD40_like
DDHD
Motif
Other DBs
NCBI-GeneID:
124393513
NCBI-ProteinID:
XP_046717362
LinkDB
All DBs
Position
11:8458506..8498358
Genome browser
AA seq
644 aa
AA seq
DB search
MAAQKDSEEKKADGEDVSSVMGFSGFGRKARTFDLEAIFEQTRRTAIERSQRVLVDRQQQ
ESQSSSPDASSKKQKQKPSASTSSRQKESDDSSDSSDSSDSELIGPPPPQAPAEEDDDEL
IGPPLPEGYSRTTADADAEDDSDDDENEMEEEDDDPVKKIPDTHEITLLHGTKTVSAMGL
DPSGARLVTGSYDFDVKFWDFAGMDAALQAFRSLQPCECHQIKALQYSVTGDVILVVAGN
AQAKVLDRDGFQVLECIKGDQYIVDMANTKGHTAMLNSGCWHPKIKEEFLTCSNDGTVRT
WDLNNEKKHKSVFKPRSTQGKRVTPTCCTYSRDGKLIAAGCQDGTIQIWDRNLSVHTKFH
CRQAHAMGSDTSCLTFSYDGTTLASRGGDDTLKTWDIRNFKKPLNVATGLCSYFPMTDCC
FSPDDKLLVTGTSVKRDQGNGKLVFFDRESFKKVYEIEVASTSVVRCLWHPKLNQIMVGT
GSGLAKVYYDPVKSQRGAKLCVVKSKSKEKQAETLTQDYIITPHALPMFREARQRSTKKQ
LEKDRLDPVKSHKPEPPVSGPGRGGRVAAHGGTLSSFIVKNIALDKTDDSNPREAILRHA
KDAAENPYWVAPAYKKTQPNPLFAEEESEDEDANKEPEWKKRKI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacagaaagacagtgaagaaaagaaagctgatggagaggatgtgtcctcagtc
atgggcttctctggttttggtagaaaagctcggacgttcgacctggaggctatttttgaa
cagactcggaggacggctattgaaagaagtcagagggttttagtagaccgtcagcagcag
gagtctcagagctctagtccagatgcttcctcaaaaaaacagaaacaaaaaccttctgct
tccacttctagcaggcaaaaggagagtgacgacagcagcgacagcagcgacagcagcgac
tctgagcttattggtcctcctcctccacaagcacctgctgaggaggatgacgatgagctg
attggacctccactcccagaaggctacagccgcaccacagctgatgctgatgctgaggat
gacagcgacgacgatgagaacgaaatggaggaggaggatgacgatccagtaaagaaaatt
ccagacactcatgagatcacacttctgcatggtacaaagacagtctcagcaatgggcctc
gacccgtctggcgctcggctggtcactggtagctatgacttcgatgtcaagttctgggac
tttgccgggatggatgcagcgctgcaggccttcaggtccctacagccgtgtgaatgtcac
cagatcaaagccttgcagtatagcgtaaccggcgacgtgatcctggtagtggcaggaaat
gcccaagccaaagttttggatcgggacggcttccaagtcctagagtgcatcaaaggggac
cagtatattgtggacatggccaataccaagggccacacggccatgctgaacagcggctgc
tggcaccccaagatcaaagaggagttcctcacctgctccaacgacgggaccgtgcggacc
tgggacctgaacaatgagaaaaagcacaagtctgtattcaagcctcgatcgacacagggc
aagagagtcacccccacctgctgcacctacagccgtgatggcaagctgatcgccgcaggc
tgccaagacggcacgatccagatctgggacagaaacctaagcgttcatacaaagttccac
tgccgccaagcccatgcaatgggctcagacacctcctgcctcactttctcctacgatgga
accacgctcgcttcacgaggaggggatgacactctcaagacatgggacattcgcaacttc
aagaagcctctgaatgttgccacagggttatgctcatacttcccaatgacagactgctgc
ttcagtcctgacgataaactcctggtgacgggtacttcagtgaagcgcgaccaagggaac
ggcaaactggtcttctttgacagagagtccttcaagaaagtatacgagatcgaggtggct
agcacgagtgtggttcgctgtctctggcacccgaagctgaaccagatcatggtggggacg
gggagtggcctggccaaagtctactatgacccagtcaagagccagaggggcgctaaactt
tgtgtggtgaagagcaagagcaaagagaagcaggcagagacgctgacgcaggactacatc
atcaccccccacgcattgccaatgttccgcgaggccagacagcgcagcaccaagaagcag
ctggaaaaagacagactcgaccctgtgaaatcccacaagcccgagccgcctgtgtccggc
ccaggcaggggaggtcgtgtggcagcccacggaggcactctttcgtccttcatcgtgaag
aacatcgctcttgacaagacagacgacagcaatcctcgcgaggccatcctgcgccacgcc
aaagatgcagcagagaacccgtactgggtcgcccctgcgtataaaaagactcagccgaac
cccttgtttgcagaggaagaatccgaggacgaggacgccaacaaggagcccgagtggaag
aaacgcaagatctga
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