Silurus meridionalis (southern catfish): 124393515
Help
Entry
124393515 CDS
T08004
Name
(RefSeq) uncharacterized protein LOC124393515
KO
K15293
protein unc-13 A/B/C
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124393515
Membrane trafficking [BR:
smeo04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
124393515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
124393515
NCBI-ProteinID:
XP_046717364
LinkDB
All DBs
Position
11:2709841..2749879
Genome browser
AA seq
3130 aa
AA seq
DB search
MSLLCVRVKKAKLQGPPDKFNAYVTLKVQNVKSTTIMVRGDQPCWEQDFMFEINRLDLGL
IVEVWNKGLIWDTLLGTAWIPLKSIRHSEEEGLGDWTFLHSEVLRKADEIYGTNNPTPHK
VLLDTRFELPFEIPEDEARYWSCKLESINAMGMHDEFPLQDDVVCRPLPLAASQCCSYFG
WPEVSQTLDDLDSAMDDRDSDYRSETSNSLPPRYHTTAQPNSSVHQYPVGPRFQQHADSC
TDSVHSFELDYRDNHPSRTLNERGRVRIIPVDSGMGVEDWELKYKMWSKGSLNDYLDEED
CDLDIEDGNPNKIIPFKRSGQNSMIREQPQKTSLNPAYPESYNTIDRRLRKKTGEPVGFL
KTNTECIKDFFNPDLALLRQKRGELVLRQVAEMEEDDEKMMPCLMPYKNGLFYKTRMQAK
NNVENTSRDCIVYQDIEETRLRRRIEPDSEGSDEMQGSEEELDEFCSEIHQHYKHYRDVA
QGYHNRKTTKGKIGGGTPEVMLSPVEEPVDEYVDPIDELQCLVESVSEYLAEKEQEISNY
GFLPETSESRLSSQGSVRTGSFEDDQGITSKELKEVNSIEAKENKLSEQGSGKKNAMNFL
ISSLTDRIAPNLKQTSSNNVQSSEEYDDDAGSSGLSKLFSLMTKSSSLAPIAVVSPAQET
PPDERTFLKPSQPSDAKPHQMLQKIPMKIPQQNNKHINQNVNKFQQPSSVKSEFTEEALT
LSNPPNLSSVGGAYGASKSFSEDFSKNELGRNHGHSVDQLNDMQDFRHSGDQTRTINESP
KSTADLGFFMPLKKSFSSLISPVPRMPPEHQTQTVFPVFRIENDVREAKSLPENKMGDEV
PTQQPPKEERAMFSGLLKFASGDDTGEFQISQQHAAKSNQTAPSKSTSATRFPSNSNKAT
SSGQYIAEMQSKQTLETSWFSSLFKNEPNEKMQPASPQGQMLVNQSFRPATGSSEHQKPA
KAVNKQMYNMQQTSNPNTSESESQKRKGLFSTLFKSSSSDDMPGSKTDLHSDEEGLFSGL
KYFASFGGMPKSSDSNQIQIRNEACQTKNPAQTHLENQPCAHKQAEKPPPSGASLLGLEP
PQHRDLTDSQQPPPPPQDHLSAAQIASTEPQFKPQNTRSSSVEGKSFEHSPASGKKDPQS
GILSEISNKFTDSFDEISENKWDPCDQDQQSIQQESYFQSVPIYGQQTVVRDQHSSDSRV
KSVQCMDQSLISNNLKKCSDECLSGANVEFDKETNRSQNRCKSTGIKNAPLYSDDNNLDL
RTLASYERSQQRNVTYISNSTGHLPQTANFHDSSSNGVNKIYGMSSHVGLAGQLQSPQPY
LAQSFPFLYNFPKQHSFHDNSSNSFGPTYDHYWSHNSVLGELNNQSLSYDPYEYSILPSL
EASQKNEIGLEQEEYQRNLANNLNVQKKWSIYSSLDLINNCDSCFEKRGALDLSKKVNAN
FGSLQSFNEDSCHSLNSVAYLEGYYEQHPTNLSYSADRENYSTGTNGHPEGNGFIGCPYA
WNDTSATTVDIEDYAYFEDTEWYQQWLLLLEQGMWWPADDGDCGYFVYTDHEYIYALLTD
GSGQYVYACAPEDELWENKQLSDNYPCALLNNEMVIVCGFKIPLYNEDELFWFPGQDQSE
ARLLNAPLDLSDVYRKGNEIMNLNLERFSQMFESSIPAQRQQSIDFSSYRLNKVKMDTRQ
PTQNGFANQDSFLEVLDLRVNGTITNHESNHKNKELLSRKVSISACPTATTHSSGVYTCY
QPRQRRRSSSGLQVKHVDDTSEEEWRKRVQPGEEQIKKPIKKLSSVFSSLVGKSQESDSH
RSVTGSKTFTTAINAPNPALIQVLEASVNVQGSIHKPKLARQGTVSQQSSSCEVSKNSTD
IPVNMPVFSTDPKNCEKPEQNQGGFRSFFRNSLGKDELNQASVKSIQGEPKQTKENAFDL
KRVQRVGELLNFENSTSVLPLKESCSQIPSAPPSFGLRNDAKETDYVNHRTSTSEGVGKP
QRSSILSMGSQSDISEASQIPQEQIPKTASQISEVSQATPPTCYNKSEPLTKSASGLFGF
SIVFPGRTKKEEPAGRGLLSMFTDFSPQKVPPQRESTFQCQVDQMTEKAPYKKTSSIDSF
SGPDATSTQQTCTSSNQAPKETIGIKAFTLFSGSNPPQNSSPTRSTSQQSSHGLAPQDPP
KTASPESGSILGGILGGLSNFNERPVKSFFSRLGASTSQPLSTPQPTAGPINDAEIPDQV
PPKQLQEKDIISGVQKPQHQQAIPQKEPPRTRLLSLLGVYSPQQNTPQATPVQIGFLSSA
NKGAPNEVFSTFGKPHHEQNASTAPQIDFDQSPGTSSLQNEQSTRSSVKYIPSVFSVPTS
PQPDCIVSLPDDELSIFSTKTQPTSISRLDESPGTGLLSKLSEGHYQAYEAPDIQTCASA
EDSSTVPEDITSLVDTNSVHTESASSLPNPPMCSGPGVTAQNAASGLLSMFSGSGSQNSA
PQAGSVLGGIFPGTKGQNDISGKNLLSVFSGPRSNSSLDVEDCGPSASKVPPGKSLLSMF
GGTSPQELSSSTSLLGGIFTGGITPKQSGRGLLARFGGPSSILTSQTEVTSKQLQADGQF
VGSSICSQGGTSNDVLFSEENNLEFEKSVVISSELSGSRSANTVSGESTKKLEGYETIML
HPQSASSQQHNCYFTTAMEKETIEGKPTAASQDNMESAALSGELVSNTHSWPEKNEVCPQ
HKTEDFATPECVIADKEGQQKLSDVEKSVFYTSADIVSGFMSKMFSGTTGPSKTSSSLFS
SAQASFYKSTSTKGSESQQTTKIFGLATDSLKSDLLGKFKSHQTVNPAEASPNFNSSPSP
EFTVQDQGVPTDVVTPPSGHVKLIENVIKTDSILTEQPLHQVIKSDTTKNSAPASLNPEV
IILCNDTVIECDMVTRKPVIFSDFEDTLTGKSGPVQEPSVSEPSQSMFGIAGLLPPKLSF
ITDAGNSRKSYGPSAASEGLPSKPQSDNGGLLSGLKSFSASLFSEEKPRASTHDPALQFG
AKIGFWQKEAPVPMKKQTSGVVTAQPESQGFPYNTCSPDVSLLISKEMDENINQIENEMI
HRTIIDVDRSEYEDQHFLDDSQISMSSLGLDCPSPKEQESQIKLPSSAALSSGFHQECKE
LMSAKRLVAS
NT seq
9393 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctgtgtgtcagagtaaagaaagccaaactccaggggcctccagacaaattt
aatgcctatgtgaccctgaaggtgcagaatgtcaagagtacgaccatcatggtgcgggga
gaccagccatgctgggagcaggacttcatgtttgagatcaaccgcttggacctggggctc
attgtggaggtttggaataaaggactcatctgggacactttgctggggaccgcgtggatt
cctctcaaaagcatccgtcactctgaggaggaaggtttgggagactggacatttctacac
tctgaggttttgaggaaagcagatgaaatctatggcactaacaacccgacacctcacaaa
gtgctcctggacacccgcttcgagcttcccttcgaaatcccagaggacgaggctcggtac
tggtcctgtaaattggagagcatcaatgccatggggatgcacgatgagtttccgctgcag
gatgatgtagtatgccgtcctcttcccttggctgcctctcaatgttgcagctatttcgga
tggcccgaagtatcccaaacactggatgatctggacagtgcaatggacgaccgggacagt
gactacaggagcgaaacaagcaacagtctgcccccacgctaccacaccacagcccagccc
aactcttcagtacaccagtatccggtggggccacgtttccagcaacacgccgactcctgc
accgactctgtgcatagttttgaactggactacagagacaatcatccaagcagaacccta
aatgagagagggagggttagaataattcctgtagactctggtatgggagtagaggactgg
gagctcaaatataaaatgtggagcaaaggttctcttaatgattaccttgatgaagaagat
tgcgacttggatatagaggatggcaatccaaataagatcattcccttcaaaaggtctggt
cagaattccatgattagagagcaaccccaaaagacatcactgaatcctgcctatccagag
agttacaacactatcgaccgaagacttagaaaaaagactggagagccagttggatttcta
aagacaaatacggaatgcattaaagacttcttcaaccctgatcttgctctcctccgtcag
aaacggggagaacttgtactacgtcaagtagcagaaatggaagaagatgatgagaagatg
atgccttgcttgatgccatacaaaaatggcttgttctacaaaactagaatgcaggctaaa
aacaacgtggaaaacacgtcacgggactgcattgtatatcaagacatagaagaaacaaga
cttaggaggagaatcgagcctgattctgaaggctctgatgagatgcaaggatctgaggag
gagttagatgaattctgctcagagattcatcagcactataaacactacagagacgtagct
cagggatatcataataggaagactacaaagggtaaaattgggggaggtaccccagaagtt
atgttatcacctgtggaggaacccgttgatgaatatgtcgatccaattgatgaacttcag
tgcttagtggaaagtgtgtctgaatatctggctgaaaaagagcaggagataagtaattat
ggttttctgcctgaaacaagtgaatcgaggctgtcctcccaggggagtgtaaggacagga
tcttttgaagatgaccaaggcatcacttctaaggagttaaaagaagtcaattctatagag
gccaaggagaacaaattgtctgaacagggctcaggcaagaagaatgctatgaacttcttg
attagctccttaactgacagaattgcaccaaatttaaaacaaacaagttcaaataatgtt
cagagttcggaagaatatgatgatgatgcaggtagctctggtttatcaaagctattttcg
ttaatgacaaagtcttcaagtctggcaccgattgctgtggtctctcctgctcaagaaact
ccacctgatgagaggacgttcctgaagcctagtcaaccatcagatgcaaagccacatcaa
atgcttcaaaaaatacccatgaaaattccccaacaaaacaataagcacataaatcaaaat
gtaaataaattccagcaaccttcctctgtaaagtctgagttcacagaggaagccctgacg
ctctcaaaccctccaaatctttcctcagtaggaggtgcttatggggctagcaagagtttt
tcagaagattttagtaagaatgagcttggaaggaatcacggacattcagtagatcaatta
aatgatatgcaagatttcaggcatagtggagatcagactagaaccatcaatgagtctcca
aaatctactgcagatttaggattttttatgcccttaaagaaatcatttagctctctgatc
tctccagttcctcgtatgcctcctgagcaccagactcaaacggtttttcctgtattcagg
atagaaaatgatgtccgagaggcaaaatctttgcctgagaacaaaatgggagatgaagta
cccacgcagcagcccccaaaagaagaaagggcaatgttttctggactcttaaaatttgcc
tcaggtgatgatactggtgaatttcaaatttcacaacagcatgcagccaaatctaatcag
actgctccttctaaaagtacctctgcaactagatttccctcaaattccaacaaagccaca
tcctcaggtcagtatattgctgagatgcagtccaagcagactttagagactagttggttt
tcaagccttttcaagaatgaaccaaatgaaaagatgcagcctgcaagtccacaaggccag
atgttagtgaaccagagttttagaccagctactggttcaagtgaacaccaaaaaccagca
aaggcagtaaacaaacaaatgtataatatgcaacaaacgtcaaacccaaatacttctgag
tcagaatcgcagaaaagaaaaggcttattttctaccttatttaaatcatcatcttctgat
gacatgccaggttccaaaactgatctgcattctgatgaagaaggtttgttttctggtctc
aagtattttgcctcttttggtggcatgccaaaaagttcggactcgaaccaaatacaaatc
agaaatgaagcatgtcaaacgaagaatcctgctcaaacccatctagaaaatcagccatgt
gctcataagcaagcagaaaaacctcctccgtcaggagcttctttattaggtttagaacca
cctcaacacagagaccttacagactctcagcaacctccaccacctcctcaggatcattta
tctgccgctcaaattgcgtcaactgaaccccagtttaaacctcaaaatacaagatcgagt
tctgtagagggaaaatcctttgaacattcccctgcttcaggaaaaaaagatccccagtct
ggaatattgtctgaaatttctaacaagttcactgattcttttgatgaaatttcagagaat
aaatgggatccatgtgaccaagaccaacagagcatacaacaagagagttattttcaaagt
gtgccaatatatggacagcagactgtagtgagagaccaacattcctctgattccagggtg
aaatctgtccaatgtatggaccagagcttgatttcaaacaatttaaaaaagtgttcagat
gaatgtctttcaggagccaatgttgaatttgacaaagaaacaaacagaagccaaaacaga
tgtaaaagcactggcataaagaatgcacctctctacagtgatgacaataatttggacctg
aggactttggcaagttatgaaagatcacaacaaaggaatgtgacctatatttcaaatagc
acaggccatttgccacagacggcaaatttccacgattcttcctcaaatggtgtaaataaa
atatatggcatgtcttcccatgttggcctcgcaggtcaattacagtcaccacaaccatat
ttagcacagagcttcccctttttatataatttcccaaagcagcattcttttcacgataac
tcatctaatagttttggacctacctatgaccactactggagccataattctgttctggga
gaactgaataaccagtcattgagctatgatccatatgaatatagtattttaccaagtcta
gaagcatctcaaaagaatgaaattggcttggagcaggaagagtatcaaagaaacctagcc
aacaatttaaatgtgcaaaaaaagtggagcatctatagcagtttggacctgatcaataat
tgtgactcctgtttcgaaaaaaggggcgccttagatttgagcaaaaaagtcaatgctaat
tttggtagtttgcagtcattcaacgaggacagctgccacagtttaaatagtgtagcttac
cttgaaggttattacgagcaacatccaacaaatttatcttactctgctgacagagaaaat
tattctacaggaacaaatggacatcccgaaggcaatggtttcattggttgcccttatgcc
tggaatgatacttctgcaacaactgtagatattgaggactatgcatattttgaagataca
gaatggtaccaacaatggctcttacttctagagcaaggtatgtggtggccggcagatgat
ggagattgtggatactttgtctacactgatcacgagtatatctatgccttgctgacagat
ggctctggtcagtatgtttatgcatgtgctcctgaagatgagttgtgggaaaacaagcag
ctatctgataactatccatgtgccttgctcaacaatgagatggttattgtgtgtggtttc
aaaattcctctgtacaacgaggatgaactcttctggttcccaggacaagatcagagtgag
gctcggcttctaaacgcacccctcgacctatcagatgtgtataggaagggtaatgagatc
atgaatctaaacttggaaaggttctcacagatgtttgagagctccattcctgctcaaaga
caacaatctatcgatttttcttcgtatcgattaaacaaggttaaaatggacaccaggcaa
ccgacacaaaacggttttgctaaccaggattcttttctggaagtcctagatctaagagtt
aatggaactattactaatcatgaatcaaaccataaaaacaaagaactgctttctcgaaaa
gtctccatttctgcttgcccaaccgcaacaacacactcatcaggcgtttacacgtgttac
cagcctcgtcagagacgtcgttcatcctctggattacaagtaaagcatgttgatgacact
tcagaggaagaatggcgaaagagagttcagcctggagaggaacagatcaagaaaccaatc
aagaaattatcgtctgtcttttcttctcttgttggaaaaagtcaagaatctgattcacac
agaagcgtaactggctcaaaaaccttcacaactgccataaatgctccaaatccagcattg
attcaagtcctagaagcatctgtaaatgttcaggggtcaattcacaaaccgaagctggct
agacaaggcactgtgtctcagcaatcttcttcttgtgaagtttctaaaaactcaacagac
atacctgtcaacatgcccgttttttcaacagatccaaaaaattgtgaaaaacctgagcaa
aatcaaggaggctttcgaagtttttttaggaattcactcggaaaagacgaactgaatcaa
gcgtctgtcaaatctattcaaggtgaaccaaagcagactaaggaaaatgcatttgacctt
aaaagagtacagagagtgggagaattgttaaactttgaaaactctacttcggtgctgcca
ctgaaggaatcctgttcacaaatcccttctgcacctccatcttttggtttaagaaatgat
gctaaagaaacagactatgttaatcataggacttcgacatctgaaggagttgggaaacca
cagagatcgagtatattgagcatgggtagtcagtcagatatttccgaagcatcacagata
cctcaggagcaaatacctaagactgcatcacagatttcagaggtttctcaagcaacacca
ccaacctgttataataaatcagaacctttaacgaaatcagcaagtggattgtttggcttt
tctattgtatttcctgggcgcaccaaaaaggaagaacctgcagggagagggctactgtca
atgtttactgattttagcccccaaaaggtacctcctcaaagagaatcaacttttcaatgt
caagtcgatcaaatgactgaaaaagcaccttataaaaaaacatcaagcatagattcattt
tctggccctgatgccactagtactcaacaaacttgcacatcatcaaatcaggccccaaaa
gaaacgataggtattaaggcttttactttgtttagtggttcaaatccacctcaaaattca
tcaccaactagatctaccagtcagcaatcatctcatggacttgcacctcaagatcctcca
aagactgcttcgccagaatcaggatctattcttggtggaatattaggtggcctttcaaac
tttaatgagcgtccggttaaaagctttttttctaggctcggtgcatctacctcacaacct
ttatccacccctcaaccaacagctggtccaataaatgatgctgaaattccagatcaagtg
ccccctaaacagctacaggaaaaggatataattagcggtgtacaaaaaccacaacatcaa
caagcaattcctcaaaaagagccacctagaacgcgtctactctcattgcttggtgtttat
agtccacaacagaatacacctcaagcaacacccgttcagattggatttttatcaagcgcc
aataaaggcgcaccaaatgaagtattctcgacatttggaaaaccgcaccatgagcaaaat
gctagcactgccccacaaatagattttgaccaatcccctggaacgagttccttgcaaaat
gagcaatctaccaggtcttctgtaaaatatataccatcagtatttagtgttcccacatca
ccacaaccagactgtattgtttcattacctgatgatgaactgtccattttcagcaccaaa
actcaaccaacttctatttctcgcttagatgaaagtccaggtacaggtttgctgtcaaag
cttagtgaaggtcattatcaagcctatgaagcaccagatatacagacttgtgcttctgcg
gaagattcgtccactgttccggaggatattacttcattagttgacacgaattccgtacat
acagaatcagctagtagtttaccaaaccctcccatgtgttcaggacctggggttactgct
cagaatgcagcatctggtttattgtcaatgttcagtgggtcaggttcccaaaattcagcc
ccccaagctggatctgtacttggtggaatttttccaggtaccaaaggacaaaatgacatt
tctggcaagaatctgctttctgtgttttctggcccgagatcaaattccagtttagatgta
gaggattgtggaccttcagcatcaaaagtaccacctggaaaaagtttgctatctatgttt
ggtgggacaagtccacaagagctctcatcttcaacatcattactgggaggcatttttact
ggtggcattactcctaaacagtcaggaagagggctgcttgccaggtttggtggccctagt
tcaatactaaccagtcagacagaagtaacatccaagcaactgcaagctgacggacagttt
gttggttcctcaatttgttctcagggaggtacctcaaatgatgtgttattcagtgaagaa
aataaccttgagtttgaaaaatctgtggttataagttctgaactttctggttcacgatca
gctaacactgtttcaggtgaaagtacaaaaaagcttgagggttatgaaacaataatgctg
cacccacaatcagcatcatcacaacaacataattgttattttactactgcaatggagaaa
gaaactatagagggaaaacctacagcagcaagccaagacaatatggagtctgctgcttta
tctggagaattagttagcaatactcactcatggcctgagaaaaatgaggtttgcccacag
cataaaacagaagattttgctacaccagaatgtgtaattgcagataaagaaggacaacaa
aaactttctgatgttgagaagtctgttttttacacatcagctgatatagtctctgggttc
atgtctaaaatgttctcaggtaccaccggaccctcaaaaacatcaagcagtcttttctct
tcagcgcaagcttcattttataagtcaacatctactaaagggtcagagtcacaacagaca
accaaaatctttggcttagcaaccgattctctaaaaagtgacctccttggtaagtttaaa
tctcatcaaacggtcaatccagcagaagcatcaccaaattttaattcttctccatcacct
gaatttactgttcaagatcaaggagtacctactgatgtagtaacacccccttcaggacat
gtaaagttgattgagaatgtaattaaaacagactccattttaactgagcaaccactgcac
caagtcatcaagtctgatacaactaaaaactcagcacctgcaagtttgaaccctgaagtt
attatactttgtaatgatacggtcattgaatgtgacatggtaacaaggaaaccagtcatt
tttagtgattttgaagatacattgaccggcaagtcaggaccagttcaagaaccttctgtg
tccgaaccatcccagtccatgtttggtatagctggtttattgccaccgaagcttagcttt
ataacagatgctggaaattccaggaagtcttatggtccttcagcagctagtgaaggtctt
ccttcaaagcctcaatcagataatggtggactgttgtctggactgaaatcattctcagca
agtttgttttcagaagagaagccaagagcatcgactcatgacccagcactacagtttggt
gcaaaaataggtttttggcaaaaggaagcaccggtacctatgaaaaagcagacttctggt
gtggttacagctcagcctgagtcacaaggttttccatacaacacatgttcaccagacgtt
agccttttgatttcaaaggaaatggacgaaaatatcaatcaaattgagaatgaaatgata
cacagaactataatagatgtagacagatccgagtatgaggaccagcattttctagatgac
tcacaaattagtatgtcctcccttgggctagattgtccttcccctaaagagcaggaatct
cagatcaagctcccatcctctgcagctctatcttctggattccatcaggaatgcaaggaa
cttatgagtgcaaaaaggctagtagcatcataa
DBGET
integrated database retrieval system
