Silurus meridionalis (southern catfish): 124393563
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Entry
124393563 CDS
T08004
Name
(RefSeq) rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124393563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124393563
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124393563
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
124393563
NCBI-ProteinID:
XP_046717431
LinkDB
All DBs
Position
11:complement(22317545..22334197)
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AA seq
914 aa
AA seq
DB search
MSLSDQSLQFFPVSARVSAVRARGLRIKGKDGTNDAYAALQAGRETFRTPVSEKRAEPVW
GGDDAAFIFTMPPEAADLQVRVLHRVPLGADKLLGLAVVDVHELRRDSERENPQWFKLLN
KAGKADKERGEVLLDVQFLKSSMSVSMIDLSDKSHSRLGKFKDKLRGKKKDGLSDSASAI
LPSVTQVLTDSEGEMDGDKDTTKKKKNKLKSLFVPKSNMKRNSLSQSMSALGTLPDKNSS
ISSSTSSGLNVESSEGKKKKKFTFLTHKRTGSTDSKASNQSDVTNGSTNQNPASQIDICI
NGSHIYKEETQSEEVQEMDEEEEEEEEEEKMRKKGRNGEEREKSRRLLRKRRNKQRTQMM
EEEERESEKGQDGEKVSRRERSQEEEKRRIEKENETRLKEEERVREEKERKRAEMELKRK
DEEKERRNMEMEEKKKKEKQMREDVLFEERVTMQSTDFTRSARISNVKPSVSVPATVSQP
SMVNRNPFLDDDLDSSILENVLSVETTAKKGPAPLPPHEKPQLTGPDGSHLKDISKRPAP
QPPGMLKMTGKLIDQPGPGQEAKKNPEKHYESKVTSVSEDDTQADTNPFTCDESVAVKPG
QIPTPKPRMKTGTVHLGETETNSNGNPSILRTANDITAEDVKSNLSDNLSERKEHLEDKV
EPAKPNDLSYVNQDVYPEPQISNLAGLLNSESSQKKSRAPLPPSKPKRTGDLSRPQTMPC
LPNKTNLEQSHESRGNQKEKDNARFSSEIRSINTSSATGPSLTFSPLTEKSQVMKPCAAN
SVDMGSGSQSRTLPWAKVVPNDAGEVKEQVVLTSVIRQHAVKPLSAAETQPEMYESRVSD
KTQPNTKVAEAVKGPYSQLTQAELISLVLRQQEQLSQRDARIQELEQYIDNLLVHVMEEK
PSILMSMNAMKKSV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtcggatcagagtctgcagtttttcccggtgagcgcgcgggtgtcggcggtc
cgcgcgcgaggcctccggatcaaagggaaggacggcacgaacgacgcgtacgcggcgctg
caggcgggccgcgagacgttccgcacgcccgtgtcggagaagcgcgcggagccggtgtgg
ggaggcgatgacgccgcgttcatcttcacgatgccgcccgaagccgccgacctgcaggtg
cgcgtgctgcaccgcgtgccgctcggggcggacaagctgctcggactggcggtcgtcgac
gtgcacgagctccggcgggacagcgagcgcgagaacccccagtggttcaagctattaaac
aaagctgggaaagccgataaggagcgcggtgaggttctgctggacgttcagttcctgaag
agcagcatgagcgtcagtatgatcgacctttccgataaatcacactcgcgccttggaaag
tttaaggataaactgcggggcaaaaagaaagacggtctgagcgactcggcctccgccatt
ttgccttccgtcacccaggtgctgacggacagtgagggagagatggatggagataaagat
acaacaaaaaagaagaagaacaagctgaagtctctttttgttccgaaatccaacatgaag
cgtaactctttgtcccagtccatgtccgcattaggaacgcttccagataaaaactcctcc
atcagctcgagtacatcctcaggcctcaatgtggagtcttctgaaggaaagaaaaagaag
aaatttacctttttaacacacaagcggactggcagcacagacagcaaagcgtccaatcag
agtgacgtcaccaatggctcgaccaatcagaaccctgcatcacagattgatatttgcata
aatggcagccatatttacaaagaagaaacccaaagtgaagaagtgcaggaaatggacgag
gaggaggaggaggaggaggaggaggagaaaatgaggaagaaggggagaaatggagaagag
agagagaagagcaggagattgctaaggaagagaagaaacaagcagagaacacaaatgatg
gaggaggaagaaagagaaagtgaaaagggccaagatggagagaaagttagcagaagagaa
agaagccaggaggaagaaaagagaaggatagagaaagagaacgagacaagacttaaagaa
gaagaacgagttcgagaagaaaaagagcggaagagggcagagatggagctgaagagaaaa
gacgaggagaaggaaagaaggaatatggagatggaggaaaagaaaaagaaggaaaaacag
atgagagaagatgttttatttgaagagagagtcaccatgcaatccacagacttcactcgt
tcagccagaatctccaacgtgaaaccgagcgtatcagtccctgcgacagtttctcaacca
tctatggtgaaccgcaacccctttttggatgacgatttagattccagcattttggaaaac
gtcttgagtgttgagacaactgctaaaaaaggccctgccccattacctccacatgagaaa
ccacagttgactggaccagatggttcccatttaaaagacatctcaaaacgtccagcaccc
cagccaccaggtatgctgaagatgactgggaaattaattgatcaaccagggcctggtcaa
gaagcaaagaaaaaccctgagaaacattacgagagcaaagtcacatcggtctctgaagat
gacacacaagccgatactaatcctttcacgtgtgatgaatcggtggctgtaaaacctggc
cagataccaacaccaaaaccaagaatgaagactggtactgtccacctgggagaaacagaa
actaatagcaatggaaatccatcaatactgaggacagcaaatgatattacagccgaagat
gtcaaaagtaaccttagtgataatctgtcagaaagaaaagaacatctggaggacaaagtt
gagcctgcaaaaccaaacgatctatcatatgtgaatcaggatgtttatccagaacctcaa
atttccaaccttgctggactgctaaacagtgaaagctctcaaaagaagtctcgagctcct
cttcctccttctaaacccaaaagaactggagatctaagcagaccacaaacaatgccttgt
cttccaaacaagactaaccttgaacaaagccacgagagccgtgggaatcagaaggaaaaa
gataatgcacgattttcaagtgaaatacgttcaatcaacacttcatcggccacaggtcca
tccttaacgttcagtccacttactgaaaaatcacaggtcatgaaaccttgtgctgctaat
tcagtggacatgggttctggttctcagtctaggactttgccatgggctaaagtggtaccc
aatgatgcaggtgaagtaaaggaacaagttgttctaacttcagtaatcaggcagcatgct
gtgaaacctctaagcgctgcagagactcagccagaaatgtatgaatctcgagtatcagac
aaaacgcagcccaacacaaaggttgcggaagctgtaaaaggcccatactctcagttgaca
caggccgagctgatctctctggtgttacggcagcaggagcagctttctcagcgtgatgcc
aggatccaggagctggagcaatacattgataacctgctggttcatgtgatggaagaaaag
ccgagcattctgatgagcatgaacgcgatgaaaaaatctgtgtga
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