Silurus meridionalis (southern catfish): 124393564
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Entry
124393564 CDS
T08004
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124393564 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393564 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124393564 (clip1b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124393564 (clip1b)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
124393564 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
HIP1_clath_bdg
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
124393564
NCBI-ProteinID:
XP_046717432
LinkDB
All DBs
Position
11:10260888..10279966
Genome browser
AA seq
947 aa
AA seq
DB search
MSTGKPSGLKPPTKISKPSSLPTKTSPPSATAKTSTSPGPGAAGVNDSVAEFTVGERVWV
NGNKPGYVQFVGGTQFAPGQWAGIVLDKPIGKNDGSVAGVRYFQCDDLRGIFTRPSKLSR
TPLPECEANGAPPCTSQMSSADIPTAASEEAQSTTAAKTSTNLATAASGSVSNLSETDST
MKGKRELKLGDRVLIGGTKAGVVRFLGETEFAKGHWCGVELDEPLGKNDGAVAGARYFQC
LPKYGLFAPAHKVTRIGFPSTTKLKNSRRRSTLQHSPSASSVSSLSSVTSSVGGKPSRAG
LLTETSSRYARKISGTTALLEALKEKQQHIEQLLAERDIERTEVAKATCHAGEVQQELAL
LRKGQDQYVLEMEAKLDQLRRLVETADREKVELLNQLEEEKRKVEDLQFRVEEAYITKGD
LETQTKLEHAHIKELEQSLLFEKTKADKLQRELEDTRVATVSERSRIMELEKEVSELQLR
LRAQRAEAGSGSPPLQDKKVRELSNELEARHKEVHLLQQKLSSSNQENTSLQHQLDDLKK
KLDAEAEEHKKIALCIKEMQSSTQAEKEHLEQLLSEKKKLEEEVALRQQQDDEQKQREKD
LWEKLGKAKQELSKVQGRSDELEHKVAELQVFKDKIQNIQSSEVLEQLKQRNQDLHQELE
TLKQQNSKYQEELSVCKDQLGSENQRIGSLCKEIEELKLAADQKSLRLVALQEEKGKFSQ
KLDSSQQLTGERLIPDDQSEIRERENSNTLISEKDKELEALRNEIAVLRGENAMAKTLQT
AVESLERDKVTLQSRVHSLEMKLEGKQNNDQEENSSGDAIVSQLREEKEFAEGQINFLNS
VIVDLQRKNEELKVKLKKIALAEFTGNDENNGSGEVKKKKKILPRVFCDICDCFDQHDTE
DCPTQTQSPDSPPHSTHHGSRGGERPYCDICEAFGHWTDSCNDDQTF
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggaaagccaagtggtcttaagccacctactaagatcagtaaacctagctct
ttaccaaccaagacctccccaccttcagccactgcaaaaacttcaacttctccaggtcct
ggggctgcaggagttaatgactcagtggcagagtttacagttggtgaacgtgtttgggtg
aatggaaacaagccaggatatgttcagtttgttggtggaacccagtttgcaccaggccaa
tgggcaggaattgttttggacaagcctataggaaagaatgatggctcagtcgctggagtg
cgctacttccagtgcgatgacctgcgaggcattttcacccggccttccaaactgtcccgg
acccctcttcccgagtgtgaggccaatggtgcgccgccttgcaccagccagatgtcatct
gctgacattccaactgcagcttctgaggaagctcaatctaccaccgctgctaaaacctca
acaaacctggccacggcggccagcggttctgtatccaacctgtctgagacagactcgacc
atgaagggaaaacgggagctgaagctgggcgatcgtgtgctgattgggggaacgaaggca
ggcgttgtgcgcttcctgggcgagactgaatttgctaaagggcattggtgtggcgtggag
cttgatgagccgcttggcaagaatgatggagccgtggctggtgccaggtatttccagtgt
ctgccaaagtatggtctgtttgctccagcacataaagtgacccgcattggcttcccttcc
accaccaaattgaaaaactcaaggcgcaggtccactctgcagcatagccccagcgcctcc
tcagtcagctcactgagctcagtcacctcttcagtgggaggaaaaccgagtcgtgcaggc
cttttgacagagacctcatcccgctatgcacggaagatctcggggaccacagccttgctg
gaggctctgaaggagaaacagcagcacattgagcaactcctggctgagagggacatagag
agaacggaagtggccaaagcaacctgtcatgctggagaggtgcagcaggagctggccttg
ttaaggaaaggccaggatcaatatgttcttgagatggaggctaaacttgaccagttacgc
agacttgtcgagactgctgacagagaaaaagtggaattgttaaatcagttagaagaggag
aaaaggaaggtggaagatcttcaattccgtgtagaggaagcttacattaccaaaggtgac
ttagagacgcagaccaaactggaacatgcccacattaaggagctcgaacagagccttctc
tttgaaaagaccaaagctgataaactccagagggagttagaggatactagggtggccaca
gtgtctgaaaggtcacggatcatggagctggagaaggaagtttcagagttgcaactacgc
ttacgagctcagcgagcagaagctggttcaggctcacctccattacaggacaaaaaggtt
agggagctgagcaatgagctggaggccagacacaaagaggtgcatctccttcaacagaaa
ctcagctcctcaaatcaggaaaacacttccctccagcatcagctggatgatttgaagaaa
aaacttgatgccgaagcggaggaacataaaaaaattgcactctgcataaaagagatgcaa
agtagcacgcaggcagagaaggaacatctggagcagctgctcagtgaaaaaaagaagcta
gaggaggaggtggccctcaggcagcagcaggatgatgagcaaaagcagcgtgagaaggat
ctgtgggagaaactaggcaaagcgaagcaggagctaagcaaagtgcagggaaggagtgat
gagctggagcacaaggtggctgagctgcaagtgttcaaggataaaatccagaatatccag
tcttcagaggttttggaacaattaaaacaaaggaatcaagatttacatcaggagcttgaa
actctgaagcagcagaactcaaagtatcaggaggaacttagtgtgtgcaaggatcagctc
ggttctgagaaccagcgcattggaagcctgtgcaaagaaatcgaggagctgaagctggca
gctgatcagaagtcattgaggcttgtggcactgcaggaggaaaaaggaaagttttctcag
aagctggacagcagccagcagcttactggagagcgtctgataccagacgaccagtcagag
attagggagagggaaaactccaacactttaatatccgaaaaggacaaagaattagaagca
ttaaggaatgagattgcagtgttgcgtggagagaatgcaatggctaaaacactgcagaca
gctgtggagtctctggagcgggacaaggtgacgctacagagcagagtgcacagtctcgaa
atgaagctggagggcaagcagaataatgaccaggaggagaattcctctggtgatgcaatt
gtaagccagctaagagaagaaaaagagtttgctgagggacagatcaatttcctgaactca
gtcatagtagatcttcagaggaagaatgaggagctgaaggtgaagctgaagaaaatagcc
ttggctgagttcactgggaatgacgagaacaatggatctggggaggtcaagaagaagaag
aaaatcctgccacgtgtcttctgtgacatctgtgactgttttgaccagcacgacacagaa
gactgtcccacccaaacacagtctcctgactcgcctcctcacagcacgcatcatggcagc
cgcggaggggaacggccctactgcgacatctgcgaggcgttcggccactggacagactcc
tgtaacgatgaccaaactttttaa
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