Silurus meridionalis (southern catfish): 124393571
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Entry
124393571 CDS
T08004
Name
(RefSeq) homeobox protein cut-like 1
KO
K09313
homeobox protein cut-like
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124393571
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
124393571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HTH_40
HTH_23
CENP-B_N
Med9
HTH_3
HTH_10
HTH_29
Terminase_5
HTH_28
Motif
Other DBs
NCBI-GeneID:
124393571
NCBI-ProteinID:
XP_046717444
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All DBs
Position
11:complement(22893275..22918242)
Genome browser
AA seq
1060 aa
AA seq
DB search
MAAVRAGSMFQRWKRFDLRQLQKDLDVAANALASTQHENEQTRKKLIDQSDELKKHTPED
LHEHITPLLKGFQSEIDALCERSKESEAAFLSVHKRLIDVPDPVSALEAVQQLQIAVVKM
RDVEAENQKLRERLQEYDREVAEVKGHEETIKALREKLESYEHLIHCGTKDEDEEQHHDE
EKETPGESKTKMAEFETANQALEVELVVKQREVERLIEDVQKLQSSLTELTDSTANQIRD
LQQQLDYKHALLQELEEKLEAQADYEEIKRELSILRSMELGSSERPAGQGSPRQRDAARQ
EDNSQDRDAFQQPLIHEEITGSAQSHLPASSSSSTPPQSGHSHSPLSQILLRSKAPPESS
HSFSSDRFRHGFGATVPPLSGKPSVNSFLQRAFGQNLYSSDLHLEEEVDTTEIARQVKEQ
LMKHNIGQRVFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFNKMRQFLSDEQNILTL
RSIQGRQRGNITNRVRVPESTSDDSLKSIMDRTKRDLQGHKFDHLSSVLDVQQAMPSPTM
TSEIPNMSSKLLSSSVPVLSYSPLDLHSVKNTSSSSVMDSWKEQWWSAIHGEQHKDTHTQ
EEAEDQWKDQTNTESPFTRSSEQNLQMSNTDETPHSSPLLPSASSSPLSLQTKQMKATMA
PLTSEQYERFMYQELDTLELTQQVKEKLAKNGICQRVFGEKVRNTVWSHAETDTETTPLL
YWNKLTQKGREPFIRMQLWIEGELQDPMKESSACVSPVPESPECSSEELVKLVKDQQEEA
ESESHDTAVSIQEAAAVGPPELDTYSISKRVREVLSDNNLGQRLFGEAVLGLTQGSVSDL
LARPKPWHRLSVKGREPFVRMQRWLNDANNIHKLRAVKHTEKKVYLKRHVSSVCEDTVVD
SGVCVGEYGQECVPQLKKSRVVLTALEKEALRKAYEEKPYPSPGTIEELAQQLGLKPSTV
TNWFHNYRSRIRRGVSTDAAAARSGGVTEGQTSGTQESSFNFSESSASPGVLRDSSLRRR
KAANLNSIIHRLEKAANRDEAHDDEDTCESAECENASSSG
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgcgggctggatcgatgttccagcggtggaagcgctttgatcttcgccag
ctgcagaaagaccttgatgtcgctgccaacgctctcgccagcacacagcatgagaacgaa
caaacacgaaaaaaactcatcgaccagagcgacgagctcaaaaaacacacaccggaggac
ttacatgaacacatcactccactgttaaagggcttccagtctgagatcgatgctctgtgt
gaaaggagtaaagagtcagaggctgctttcctcagtgtacataagagattaattgatgtc
ccagaccccgtgtctgcgttagaagcagtgcagcagctgcagattgcggttgttaagatg
cgcgacgtggaggcggagaatcagaagttgagagagagactgcaagagtatgacagagag
gtcgctgaggtcaaaggtcacgaagaaacaattaaagctttgagggagaaattggagtca
tacgaacatttaattcactgcgggacgaaggacgaagatgaagagcaacaccacgatgaa
gaaaaagaaacacccggtgagagtaaaacgaagatggcggagttcgagacggccaatcag
gctctggaggtggagcttgtggtaaagcagagagaggtggagcgtctgattgaggatgta
cagaaacttcagagcagcttgactgagctcacagactcgacagccaatcagatcagagat
ttacagcagcagctcgactacaaacatgcactactgcaggagctcgaggagaaactggag
gctcaggcagattatgaggagataaaaagggaactgagcatcctcagatccatggagctc
ggttcctcggagcgtcctgcaggacagggatccccgagacagcgggacgcagccagacag
gaggacaacagccaggacagagacgccttccaacagccactgattcatgaggagatcact
ggttctgctcagagtcatcttcctgcctcatcctcctcctccacacctcctcagtctggc
cactcccactcacctctttctcaaatcctcctgaggagcaaagctccacctgagtcgtcc
cactccttctcctctgatcgtttcaggcacggcttcggtgccactgttcctccactctct
gggaaaccctcagtgaactcatttctacagcgggcttttgggcagaacctgtacagctct
gacctgcacctggaagaggaagtggacacgactgaaattgcacggcaggtaaaggagcag
ctgatgaagcacaacatcgggcagcgcgtgtttggacattacgtgctcgggttgtctcag
gggtcagtcagcgagatcctcgctcgccccaaaccctggaacaaactcactgtccgcggg
aaagaaccgtttaataagatgaggcagttcctgtctgacgagcagaacatcctgacgctg
aggagcattcagggacgacaaagaggcaacatcactaatagagtccgtgttcctgaaagc
acctcagacgactccctcaagtccattatggatcggactaaaagagacctgcagggacac
aaatttgatcatctttcatctgtcctggatgtacagcaggccatgcccagtcccacaatg
acctctgaaattcccaatatgagctctaaattgctgagttcctctgttcctgtgctgtct
tactcacctttggatcttcattctgtgaagaacacgtcctcctcttctgtgatggactcc
tggaaagagcagtggtggagcgcgatacacggcgaacagcacaaagacacacacactcag
gaagaagctgaggatcagtggaaagaccagaccaacacagagtctccatttaccagaagt
tcggaacaaaatttgcagatgtccaacacagacgagacgcctcacagcagcccattgctg
ccttctgcgtcttcttctcccttgtcattgcaaacaaagcaaatgaaggccacgatggcg
ccactaacatctgagcagtacgaaagattcatgtaccaggaactggatacgctggagctc
acgcaacaggtcaaagagaaactcgctaagaacggcatctgccaaagagtgtttggggag
aaggtacgaaatacggtgtggtcacatgcggagactgacacagagaccacaccccttctt
tactggaataaactgactcagaaaggcagagagccgtttatacgcatgcagctgtggatt
gaaggagaactgcaggaccccatgaaggagtcttctgcgtgtgttagccccgtccctgag
tctcctgaatgctcgtctgaggagctcgttaaactcgtcaaggaccagcaggaagaggcg
gagtctgagtcacatgacaccgcagtcagcatacaggaagcggcggcggtcggtccacca
gaactcgacacctactccattagcaaacgggtcagagaggttctgagtgataataatctt
ggtcagcgtctgttcggtgaggctgttttgggtctgactcagggttcggtgtcggatctt
ttggctcggcccaaaccgtggcacagactgagtgtgaaaggccgcgagccgtttgtgcga
atgcagcgatggctgaacgacgcgaacaacatccacaaactgagagcagtcaaacacacg
gagaaaaaagtgtatctgaagaggcatgtgagctcggtgtgtgaggacactgtggtggac
agtggggtgtgtgtgggcgagtatggacaggagtgtgttccacagctgaagaaatctcgg
gtcgtcctcactgcgctggagaaagaggctctgagaaaagcttacgaggagaaaccttat
ccctctccaggaaccattgaggaacttgcacagcagcttggactcaaacccagcactgtc
accaactggtttcataactacaggtctcgtattcggcgtggggtttccacggacgcggct
gcagcgagatcaggtggtgtcactgagggacagacgagtggaacccaagagtcgtccttt
aacttctcagaatcctcggcttcgcccggagttctgagagacagcagcctgcgcagacgg
aaagccgccaacctgaacagcatcatccaccggctggagaaagctgcgaatcgggacgag
gcccatgacgacgaggacacgtgcgagagtgcagagtgtgagaacgcttcctcttcaggg
taa
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