Silurus meridionalis (southern catfish): 124393599
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Entry
124393599 CDS
T08004
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124393599 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393599 (rsf1b.1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
124393599 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
124393599
NCBI-ProteinID:
XP_046717474
LinkDB
All DBs
Position
11:8315059..8331208
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AA seq
1596 aa
AA seq
DB search
MRVWKKNTQNSRPRCIVGSHWSSSVQSPNPSIVKMAASAAAAASSTGLCPSFAVICSFLE
RYGALLDLPELTFTQLERYLQETSTVPKLLVDLHVKLLRKIGKSVSADRWEKYLVKICQD
FNTTWAWELEKKGYREMTVECKTGILKYLCESQFDDNVKFKTAINEEDPDKMRLQPIGRD
KDGLMYWFQLDQAHNVRVYVEEQDDLDGSSWKCVVRNRNDLAQILALLKTQIDPSLLVKK
DQEEGSTSISPNPETEENKKKEDDAEKDKDLNEEKSLRTEDATLGQTDNKKQEIAEETEA
LMDKDTKDVKSEKPDVVEKIVSKVVKMEPMEVDDQAINSTASESTSEKNGGLLISENTEE
VKKKSDEIQKTLKNDQQAKIPLKKREMKRSEDFDNSNCGGSSIIVRNPAVKEVRPTGEEN
GLSSENLNGIVSPPAANQTCTEESMEEMETAASKGDQKTSTKPEEAAQTTKKSSESTATQ
MQTDLKKAEKPAKMDVAKASKPLDEEAPEKSCVMKPTDKAEIDKKTETIKECQCPNEREM
DNKQEEIIKHESGQTDKKDDTALNKNADAAKDDKTQTGPDTETPTLQHSIKQQSTAHEQS
KLTVKTVDKPSMSEASSTIQKDCALMEGDKPESGSTEQTKKQELPIVEKIPIKEKEDSEP
LNKKEKLLDDSNTSKENEKPSSPKANEKTEDCVTVCEVPNREPAAKASLKSDRDPTSDNA
TIRKIEGTNSISSQKDKESADQEKPDALKMAEEPPPAVSKTEEVINEEKTEGVSAENKND
EVSTENKDAEHQKKACSEKVGQDETPVKENEASTRESNKNQKENGEQKSTSEEETSVSGE
LAKDQNQAKEKETAEMSQGENESKVVSDVPQEGIRLKIKVPAHKRRAELQREEGKGDSET
EPSEGRCLRRSPRICRPTAKVAEIHDRKVEKKQVTPSVEKEENEEKEGDENTVQKKPREK
KVDQEGQAKPKGRRQRRVRWSRVRSRRKKKESEEDEESSSEEEETEEDDSDEDYQVKKKR
RRRNRDRNSSDTSTSSSDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMI
IPDGEWFCPPCQHKLLCDKLEEQLQNLDVALKKKERAERRKERLVYVGISVENIITPTVE
TEEVKQEEVVKEKKEAKKSRSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGA
GRGKDMANITGHRGKDISTILQEGGKENGRPKRTNAGQRKKKRRRLNDLDSDSTVDEEES
EEEFRLSDSSEEEEFVVSENDVDSEGEGQSFDSDFGSDGQGPTTTISSRRRPTKRLNTRP
RRRRRPRGYSDDEELEDTDDEEEEEEIVTEGSSEFSDSDLDMRRRRSHRSQKKEVNYCEA
SDSDGSQGSTNRDKAKKRRLLSSSESDESFHSMNSDEEDRKSKKQGVVLSEEESRKRRRR
LSLKRRRESEDDDNSSNSDDSEEEERPVRKRVNRIDSDDSDEEEKEKEEEKKNTEKEPED
GAAKRSSPLDYNLELPPANGQSPMKSLEGLVPRPASGVANPALTSQIGLKNNSAPQPVSV
GANGLVPQEVAPQDEDEDDLFGVTDLVDYVCNSEQM
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgtggaaaaaaaacacacagaacagtcggccgcgctgcattgtgggaagtcat
tggtcctccagcgtacagtctccaaacccatccatcgtaaaaatggctgcctcggcggca
gcggcggcttcttccaccgggttgtgcccaagcttcgccgtgatctgctcttttttagag
cgttatggggcccttttggatctgccggagctgacgttcacgcagctggagcgctatctg
caggaaacgtccacagttccgaagctgctggtagacctccatgtaaagctgcttcggaaa
atcgggaagtctgtttctgcagacagatgggagaaatatcttgtaaagatctgccaggat
ttcaataccacctgggcatgggaactggaaaagaagggatatcgtgagatgactgtggag
tgtaagactggaattctcaagtatttgtgtgaaagccagtttgacgacaatgtcaagttc
aagacagccatcaacgaagaagaccctgataaaatgcgtcttcagcccattggcagagat
aaagatggcctgatgtattggttccaacttgaccaggctcacaacgtgagggtgtacgtg
gaggagcaggatgatttagatggctcatcctggaaatgtgttgtcagaaacagaaatgat
ctggcacagatccttgccctcctgaagacccagattgatccttcactgttggtcaaaaag
gatcaggaggaaggttctactagtatcagcccaaacccagaaacagaagaaaacaagaag
aaagaggatgatgcagagaaagacaaggatctgaatgaagagaagtctctcagaactgaa
gatgcaacattagggcaaactgataataaaaagcaagaaattgcagaggaaacagaagca
ctaatggacaaagacactaaagatgtcaaatctgaaaagcctgatgtagtcgagaaaatc
gttagcaaagtggttaaaatggagcccatggaagtggatgatcaagcaatcaacagcaca
gcatcagagtcaacatcggaaaagaatggtggcctgctgatttcagaaaacacagaggag
gtgaagaagaaatcggatgagatacagaaaactttgaaaaatgaccagcaggctaagatc
cccctgaaaaagcgtgagatgaaacgaagtgaggattttgacaatagcaattgtggtggc
agcagcatcatcgtgcgtaacccagctgtgaaagaagtgcggcccaccggagaagaaaat
ggattgagcagtgagaatctcaacgggattgtctcacctcctgcagcgaaccaaacttgc
acagaggaatccatggaagagatggaaactgctgcttctaagggagatcaaaaaacatca
acaaagccagaagaggcagctcagacaactaagaaatcatctgaatctacagcgacccag
atgcaaactgatttgaagaaggctgaaaagccagccaagatggacgttgcaaaagcctca
aagcctctcgacgaggaagcacctgaaaagtcttgtgtgatgaaacctacggacaaagct
gagattgacaagaaaacagagaccataaaagagtgtcaatgtcctaatgagagagagatg
gataacaaacaagaagaaataataaaacatgagtctggtcagactgataaaaaggatgat
acagccttgaataagaatgcagatgctgcaaaagatgacaaaacacaaacggggcctgac
actgagacacctacattacaacactctataaagcagcaaagcactgctcatgaacaaagt
aagcttactgtcaagacagtggacaagcctagcatgtctgaagcatcatctacaattcag
aaggactgtgccttaatggaaggtgataaacctgaatcaggttccacagagcaaacaaag
aaacaggagctacctatagtggagaaaatcccaattaaggaaaaggaagactctgaacct
ttaaataaaaaggagaaattgctagatgattcaaatacatccaaggagaacgaaaaacca
tcctcgccaaaagctaatgaaaagactgaagactgtgtgactgtgtgtgaagtgcccaac
agggaacctgcagcaaaagcatctttaaaatcagatcgtgacccaacgtcggataatgca
actattagaaagatagaaggaactaattcaattagtagccaaaaagataaagaatcagca
gatcaggagaaaccagatgctctgaaaatggctgaggaacctcctcctgctgtatccaaa
acagaggaagtaataaatgaggaaaagactgaaggtgtttcagcagaaaacaaaaatgat
gaggtatccacagaaaacaaagatgctgaacatcaaaagaaggcttgtagtgagaaagtt
gggcaggatgagactcctgttaaggagaacgaggcttctacgagggagtccaacaaaaat
cagaaagaaaatggtgaacaaaaaagtacttctgaggaggaaacgagtgttagtggggaa
ttggccaaagaccagaatcaagcaaaggaaaaggagactgctgagatgagtcaaggagaa
aacgagagcaaagtggtgtcagatgtaccgcaagaaggtatccgtctaaaaatcaaggtc
ccagctcacaagcgaagagcagagctgcagcgagaagagggaaagggtgactctgagact
gagccaagtgaagggcgatgtctaaggcgctcgccgaggatttgcagaccaacggccaag
gtagcagaaatccacgatcggaaggtagagaagaaacaggtcacgccttcggtcgagaag
gaggaaaatgaagaaaaggagggagatgaaaatacggtacaaaaaaagccaagagaaaag
aaggttgatcaagaaggacaagctaaaccaaagggaagacggcaaaggcgggtgcgctgg
tccagggtccggtcacgacgcaaaaagaaagagtctgaggaagatgaggagagttcgagt
gaggaagaggagacagaggaggatgacagtgacgaggattaccaggtgaaaaagaaaagg
agaaggagaaaccgcgataggaacagctctgatacttctacctcgtcttcagatgacctt
cccccaaacgatgacccctgcaaacactgtggcctgccaaatcatcctgagctgattctg
ctgtgcgactcatgtgacagcgggtatcacacagcgtgtcttcgacctcctctcatgatc
atccctgacggtgaatggttctgtccgccgtgccaacataaactgctttgtgacaagctt
gaagagcagttacagaatctagatgttgcccttaaaaagaaggaacgtgctgagcggagg
aaagagcgactggtctacgttggaatcagcgttgagaatataatcacacctactgttgaa
acagaggaagtaaaacaagaagaggtggtgaaagagaagaaggaggccaagaaaagcagg
tcctggggccgaagatcaaccagggcaaaaaaatatataagctacaggtttgatgagttt
gatgaagctatcgaggaggcaattgaggaagatatcaaagaggctgagggaggaggagca
ggccgtggcaaggacatggcgaatatcacaggccaccgagggaaggacatatccaccatt
ttgcaggaaggagggaaagaaaatgggcggcctaagcgtacaaatgctggacagcgaaag
aaaaaacggcggcgcctcaacgatctggacagcgacagcaccgtggatgaagaggagagc
gaagaagagttccgcctcagtgacagcagtgaggaggaggaatttgtggtgtctgaaaat
gacgtggacagcgagggagaggggcaatcctttgacagcgacttcggcagcgacggccag
ggaccaactacaacaatttcatcgaggcggagaccgactaaacggttgaacacacgaccc
cgcaggcgccgcagacctaggggatactctgatgatgaagagctcgaggatactgatgat
gaggaggaagaggaagaaatagtgactgaaggttccagtgagtttagtgacagtgacctg
gacatgcgcagacgtcgttcccaccggagccagaaaaaggaggtcaattactgcgaggca
tctgactctgatggctcccagggaagcactaacagggacaaggccaagaagcgtagactc
ttatccagctccgagagtgatgagagcttccattctatgaactctgacgaggaagataga
aagagtaaaaagcagggtgtagtcctgtcggaagaggagtctcgtaaacggcgcaggcgc
ctgtcattaaagcgcagaagggagtctgaagacgacgacaatagcagcaattcggatgat
tcagaggaagaggaacggcctgtccgcaaacgggtaaaccgaattgattcggatgacagc
gacgaggaggaaaaagagaaggaggaggagaagaagaacactgagaaagagccagaagat
ggtgcagcaaaacgatcgagccctctagactataacctggaacttcctcctgctaacgga
caaagccctatgaaatctctggagggtttggtcccacggcctgcctctggcgtggctaac
cctgctcttacgagtcaaatagggctgaaaaacaacagcgctccacagccagtgtctgtc
ggtgccaatggactggttccccaggaggtggcgccgcaggatgaagatgaggatgacctg
tttggggtcacagaccttgtagactatgtctgcaacagtgaacagatgtga
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integrated database retrieval system
