Silurus meridionalis (southern catfish): 124393724
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Entry
124393724 CDS
T08004
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124393724 (paxbp1)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124393724 (paxbp1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
124393724
NCBI-ProteinID:
XP_046717689
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All DBs
Position
11:18489909..18503175
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AA seq
900 aa
AA seq
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MFKKAKRCNFRRRNESDEEKDEIQDEPGQEAPQPQPCGPGGDTTHTTGAETLTTISAVNS
HGNGVQTGAMKLPKDKKKKKENREEPKASLLSFNDEEDDTEVFRVKKSNHSKKIVKQLKK
EYREEKTSHVVHEKTQLDGGHFLSGVVIKEEPVDSRGSSEQGEGEMEVDSNEEQVEENET
KQGGEFSQALSALSSLRPGEIPDAAFIHAARKRRQMARELGGEAPLVETEASSKRLVRED
EQGGSDDEDEKRIVFSGVKQKTQRQKIAEEIGIECSDDEALNTEGHDEEVTRWEQEQIRK
GISIPQVQTSQPEDTNVYYHTSYENQQYAAPYSMPYGYTAIGPESVKPVKAENAVPYPIP
SSSLTPITTALVKKRLMDRLSSMRQGRDASARRYEQIQEELQASESSILQLEGSSQHVAE
QYKFLQEMRGYVRDLLECFSEKVPAVLELEAAMHQLLRQRAVRRVQRRQDDIKDESSEFS
SLSNKAVMAPNLDPFGRDRAAYQELSRQRRVAEREARRARRRQAREQNGQRAEHKEGLSS
DDEETSTDITGFNLERDRILKESKKVFEDVVDDFHSLDCIKSRFELWKNLYFTSYRDAYI
GLCLPKLFNPLIRLQLIPWSPLEEDCPNFEYMLWFETLLFYGYEEQSTGHKEDIDSGLLP
AIVERVVLPKLAVLAEQVWDPLSQSETCRLVAFMRRLIKGYPTILHGDNRNTQELLRTIV
VRTRRTLDEDIFMPLFPKSVMENKNSSPYLFFQRQFWTSVKLLGNILHWDGILSQNSLKE
LAVDSTLNRYILSALQSTDVGEDSVEKCRKVVECFPLQWFSSLKGQQTLPQLENLCRYMK
HTASSLYRSSFTASDVDKRIAREQIKEIVKLLGRLNALDHVIAVSTENGIKDIKTLLENK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaaagcaaaacgctgcaacttcagacgccggaacgaatccgacgaagagaaa
gacgagatccaggatgagccggggcaagaagcgcctcagccgcagccatgcgggcccgga
ggggacactacccacacaaccggcgccgagacgcttaccaccatcagcgccgtcaatagt
cacggaaatggagttcagacgggagccatgaagcttcctaaagacaagaaaaagaagaag
gaaaaccgagaagaaccgaaagccagtctgctcagcttcaacgacgaagaagacgacact
gaagtgttcagggtgaagaagtcgaatcacagtaagaagattgtgaaacaactcaagaag
gagtacagagaggaaaagaccagccatgttgtgcacgaaaagacacaactcgatggcggt
cactttttgtctggagtggttattaaagaggagccagtggacagcagaggcagcagtgaa
caaggggaaggtgagatggaggtggacagtaatgaagaacaggtcgaagagaatgaaacc
aagcaaggaggagaattctctcaggctctgtctgcacttagctccctccgaccaggtgag
attccagacgcagccttcattcacgcggcccgcaaacggcggcagatggcgcgggagctt
ggaggcgaagctccgctcgtggagacagaggcgtcaagtaagcggctggtccgggaagat
gagcaaggtggcagtgacgacgaagacgagaagaggatcgtgttcagtggcgtcaaacaa
aagacccaacgtcagaaaatagcagaggaaatcggtattgagtgcagcgatgatgaggcc
ttgaatactgaaggacacgatgaagaagtcacccgctgggaacaggagcagatccggaaa
ggcattagcatcccccaggtccaaaccagtcaaccagaggacacgaacgtgtattatcac
actagctacgagaaccagcagtatgcagcaccgtatagcatgccctatggatacacagca
atcgggccagaaagtgtaaagcctgtgaaagcggagaacgctgtgccctacccaatccca
agcagcagcctcactcctatcactacagctctggtaaagaaacggctcatggacaggctg
agctccatgcgtcagggccgcgatgccagcgcccggcgctatgagcagattcaagaggag
ctgcaggcttccgaaagtagcatcctgcagctggaggggtcctcgcagcatgtcgcagag
cagtataaattcttgcaagaaatgcgagggtatgttcgagacttgcttgagtgtttcagt
gaaaaggttcctgctgttctggagctggaggctgcaatgcaccagttactaaggcaacgg
gcggtgcggcgagtccagagaagacaggatgatattaaagatgaatcatcggagttttcg
agcctttcaaataaggctgttatggctccaaatcttgacccttttggcagagatcgtgca
gcctatcaggagctcagcagacagcggagggtagcggagcgtgaggccagaagagctcgc
cgcagacaggctcgagaacagaacggacagagagccgaacacaaggagggactgtccagc
gacgacgaggagacatcaactgacataacaggcttcaacctagaaagagatcgcatttta
aaggaatcgaagaaggtgtttgaggatgtcgtcgacgatttccattccttagactgcatc
aagtcccggtttgaattgtggaagaacctttacttcacaagctacagagacgcttacatc
ggcctgtgcctgcctaaactttttaaccccctgatccggctgcagctgatcccatggtcg
cctctggaggaggactgccccaattttgagtacatgctatggtttgagactttgctgttc
tacggctatgaagagcagagcaccgggcacaaagaggacattgatagcggtctcctccct
gctatcgttgagagggtggtacttcctaaactcgcagtgctggcggagcaggtgtgggat
ccactgtcccaaagtgagacgtgcagactggtggccttcatgcggcgattaataaagggc
taccctaccattttacacggagacaaccgcaacacacaggagttgctaagaacaattgtt
gtacgcacacgacgcacgttagatgaggacatcttcatgccactgtttccaaaaagtgtc
atggaaaacaagaactcgagtccttatctctttttccaaaggcagttctggacctccgtg
aagctgctggggaacatcctgcactgggatggcatcctgtctcagaacagtctgaaggag
cttgctgttgacagcacacttaaccgctacattctatcagcactacagtcaacagatgtt
ggagaggacagcgtggagaaatgcaggaaggtggtggagtgttttcctttgcagtggttc
agcagtttaaaaggtcagcagactcttccacagctggagaacttgtgccgctacatgaag
cacacggccagttcattgtatcgtagcagttttactgcttctgatgtggacaagaggata
gcaagggagcaaattaaggagatagtgaaacttctgggtcgactcaatgctttagatcac
gtcatcgctgtctctacagagaacggaataaaagacattaagacccttttggagaataaa
tga
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