KEGG   Silurus meridionalis (southern catfish): 124393724
Entry
124393724         CDS       T08004                                 
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
  KO
K13211  GC-rich sequence DNA-binding factor
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smeo03041]
    124393724 (paxbp1)
Spliceosome [BR:smeo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    124393724 (paxbp1)
SSDB
Motif
Pfam: GCFC
Other DBs
NCBI-GeneID: 124393724
NCBI-ProteinID: XP_046717689
LinkDB
Position
11:18489909..18503175
AA seq 900 aa
MFKKAKRCNFRRRNESDEEKDEIQDEPGQEAPQPQPCGPGGDTTHTTGAETLTTISAVNS
HGNGVQTGAMKLPKDKKKKKENREEPKASLLSFNDEEDDTEVFRVKKSNHSKKIVKQLKK
EYREEKTSHVVHEKTQLDGGHFLSGVVIKEEPVDSRGSSEQGEGEMEVDSNEEQVEENET
KQGGEFSQALSALSSLRPGEIPDAAFIHAARKRRQMARELGGEAPLVETEASSKRLVRED
EQGGSDDEDEKRIVFSGVKQKTQRQKIAEEIGIECSDDEALNTEGHDEEVTRWEQEQIRK
GISIPQVQTSQPEDTNVYYHTSYENQQYAAPYSMPYGYTAIGPESVKPVKAENAVPYPIP
SSSLTPITTALVKKRLMDRLSSMRQGRDASARRYEQIQEELQASESSILQLEGSSQHVAE
QYKFLQEMRGYVRDLLECFSEKVPAVLELEAAMHQLLRQRAVRRVQRRQDDIKDESSEFS
SLSNKAVMAPNLDPFGRDRAAYQELSRQRRVAEREARRARRRQAREQNGQRAEHKEGLSS
DDEETSTDITGFNLERDRILKESKKVFEDVVDDFHSLDCIKSRFELWKNLYFTSYRDAYI
GLCLPKLFNPLIRLQLIPWSPLEEDCPNFEYMLWFETLLFYGYEEQSTGHKEDIDSGLLP
AIVERVVLPKLAVLAEQVWDPLSQSETCRLVAFMRRLIKGYPTILHGDNRNTQELLRTIV
VRTRRTLDEDIFMPLFPKSVMENKNSSPYLFFQRQFWTSVKLLGNILHWDGILSQNSLKE
LAVDSTLNRYILSALQSTDVGEDSVEKCRKVVECFPLQWFSSLKGQQTLPQLENLCRYMK
HTASSLYRSSFTASDVDKRIAREQIKEIVKLLGRLNALDHVIAVSTENGIKDIKTLLENK
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgttcaaaaaagcaaaacgctgcaacttcagacgccggaacgaatccgacgaagagaaa
gacgagatccaggatgagccggggcaagaagcgcctcagccgcagccatgcgggcccgga
ggggacactacccacacaaccggcgccgagacgcttaccaccatcagcgccgtcaatagt
cacggaaatggagttcagacgggagccatgaagcttcctaaagacaagaaaaagaagaag
gaaaaccgagaagaaccgaaagccagtctgctcagcttcaacgacgaagaagacgacact
gaagtgttcagggtgaagaagtcgaatcacagtaagaagattgtgaaacaactcaagaag
gagtacagagaggaaaagaccagccatgttgtgcacgaaaagacacaactcgatggcggt
cactttttgtctggagtggttattaaagaggagccagtggacagcagaggcagcagtgaa
caaggggaaggtgagatggaggtggacagtaatgaagaacaggtcgaagagaatgaaacc
aagcaaggaggagaattctctcaggctctgtctgcacttagctccctccgaccaggtgag
attccagacgcagccttcattcacgcggcccgcaaacggcggcagatggcgcgggagctt
ggaggcgaagctccgctcgtggagacagaggcgtcaagtaagcggctggtccgggaagat
gagcaaggtggcagtgacgacgaagacgagaagaggatcgtgttcagtggcgtcaaacaa
aagacccaacgtcagaaaatagcagaggaaatcggtattgagtgcagcgatgatgaggcc
ttgaatactgaaggacacgatgaagaagtcacccgctgggaacaggagcagatccggaaa
ggcattagcatcccccaggtccaaaccagtcaaccagaggacacgaacgtgtattatcac
actagctacgagaaccagcagtatgcagcaccgtatagcatgccctatggatacacagca
atcgggccagaaagtgtaaagcctgtgaaagcggagaacgctgtgccctacccaatccca
agcagcagcctcactcctatcactacagctctggtaaagaaacggctcatggacaggctg
agctccatgcgtcagggccgcgatgccagcgcccggcgctatgagcagattcaagaggag
ctgcaggcttccgaaagtagcatcctgcagctggaggggtcctcgcagcatgtcgcagag
cagtataaattcttgcaagaaatgcgagggtatgttcgagacttgcttgagtgtttcagt
gaaaaggttcctgctgttctggagctggaggctgcaatgcaccagttactaaggcaacgg
gcggtgcggcgagtccagagaagacaggatgatattaaagatgaatcatcggagttttcg
agcctttcaaataaggctgttatggctccaaatcttgacccttttggcagagatcgtgca
gcctatcaggagctcagcagacagcggagggtagcggagcgtgaggccagaagagctcgc
cgcagacaggctcgagaacagaacggacagagagccgaacacaaggagggactgtccagc
gacgacgaggagacatcaactgacataacaggcttcaacctagaaagagatcgcatttta
aaggaatcgaagaaggtgtttgaggatgtcgtcgacgatttccattccttagactgcatc
aagtcccggtttgaattgtggaagaacctttacttcacaagctacagagacgcttacatc
ggcctgtgcctgcctaaactttttaaccccctgatccggctgcagctgatcccatggtcg
cctctggaggaggactgccccaattttgagtacatgctatggtttgagactttgctgttc
tacggctatgaagagcagagcaccgggcacaaagaggacattgatagcggtctcctccct
gctatcgttgagagggtggtacttcctaaactcgcagtgctggcggagcaggtgtgggat
ccactgtcccaaagtgagacgtgcagactggtggccttcatgcggcgattaataaagggc
taccctaccattttacacggagacaaccgcaacacacaggagttgctaagaacaattgtt
gtacgcacacgacgcacgttagatgaggacatcttcatgccactgtttccaaaaagtgtc
atggaaaacaagaactcgagtccttatctctttttccaaaggcagttctggacctccgtg
aagctgctggggaacatcctgcactgggatggcatcctgtctcagaacagtctgaaggag
cttgctgttgacagcacacttaaccgctacattctatcagcactacagtcaacagatgtt
ggagaggacagcgtggagaaatgcaggaaggtggtggagtgttttcctttgcagtggttc
agcagtttaaaaggtcagcagactcttccacagctggagaacttgtgccgctacatgaag
cacacggccagttcattgtatcgtagcagttttactgcttctgatgtggacaagaggata
gcaagggagcaaattaaggagatagtgaaacttctgggtcgactcaatgctttagatcac
gtcatcgctgtctctacagagaacggaataaaagacattaagacccttttggagaataaa
tga

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