Silurus meridionalis (southern catfish): 124393770
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Entry
124393770 CDS
T08004
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124393770 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smeo04031
]
124393770 (trim23)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124393770 (trim23)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124393770 (trim23)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
124393770 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-B_box
Gtr1_RagA
MMR_HSR1
FemAB
Motif
Other DBs
NCBI-GeneID:
124393770
NCBI-ProteinID:
XP_046717744
LinkDB
All DBs
Position
11:225245..234712
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AA seq
599 aa
AA seq
DB search
MMMMKSVVFCSVLYGVMMMMMMKSVVFCSVLYGVMMMMMMKCCVLQCIIRCDDDDDDDEE
CCVLQCIIRCDDDDDDDEECCVLQCIIRCDDDDDDDDDEECCVLQCIIRCDDDDDDDEEC
CVLQCIIRCDDDDDDDDDDDEECCVLQCIIRCDEDESHTASVYCTVCATHLCGECSQLTH
STRTLAKHRRVPLADKPHEKTLCSQHQVHAIEFVCLEEGCQPGPLMCCVCKEYGKHQGHK
HAVLESEANQIRASILDMAHCIRTFTEEVSEYSRKLVGIVQQIEGGEQNVEDGVGMAHTE
HVPGTAENARSCVRAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMSILLSQV
STACLHCEKTLQQDDCRVVLAKQEINRLLETLQKQQQQFTEMADHIQLDAGIPVTFTKDN
RVHIGPKMEIRVVTLGLDSAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDV
GGKHKLRPLWKHYYLNTQAVVFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQ
DVPGAVSVEEMTELLSLHKLCCGRSWHIQGCDARSGTGLHEGLDWLSRQLVAAGVLDVA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgaagagtgttgtgttctgcagtgtattatacggtgtgatgatgatgatg
atgatgaagagtgttgtgttctgcagtgtattatacggtgtgatgatgatgatgatgatg
aagtgttgtgtcctgcagtgtattatacggtgtgatgatgatgatgatgatgatgaagag
tgttgtgtcctgcagtgtattatacggtgtgatgatgatgatgatgatgatgaagagtgt
tgtgttctgcagtgtattatacggtgtgatgatgatgatgatgatgatgatgatgaagag
tgttgtgtcctgcagtgtattatacggtgtgatgatgatgatgatgatgatgaagagtgt
tgtgttctgcagtgtattatacggtgtgatgatgatgatgatgatgatgatgatgatgat
gaagagtgttgtgttctgcagtgtattatacggtgtgatgaggacgagtctcacactgcg
tcggtgtactgtacggtgtgtgctacacacttgtgtggcgagtgttctcagctcacacac
tccacacgcacgctggccaaacaccgccgtgtcccgctggctgataaacctcacgagaag
acgctgtgctctcagcaccaggtccatgccatcgagtttgtatgtctggaggagggctgc
cagcccggcccgctcatgtgctgcgtctgcaaagagtacggcaagcaccagggacacaag
catgcagttctggaatctgaagccaatcagatccgggcgtccatcctggacatggcgcac
tgcatccgcaccttcactgaggaagtgtctgagtattccaggaagctggtgggcatcgtg
cagcagatagaaggaggagaacagaacgtagaagatggagtgggcatggctcatacagaa
catgttcccggtacggcggagaacgctcggtcatgtgtgcgcgcatacttcgcggacctc
cacgagacgctctgtcgtcaggaggagatggcactcagcgtcgtggatgctcacgtcagg
gagagactcatctggctgcggcagcagcaggaggacatgtccatcctcctgtcccaggtg
tccaccgcctgcctccactgtgagaagactctgcagcaggatgactgcagggtggttctg
gcaaagcaggagatcaacaggttgcttgagacccttcagaagcagcagcaacagtttaca
gaaatggctgaccacattcagttggatgcaggcatccctgtaaccttcaccaaggataac
cgcgtccacatcggacccaagatggagatccgtgtggtgacactggggctggacagcgca
ggaaaaaccaccatcctctttaaactgaagcaggacgagttcatgcagcccatccccact
ataggctttaacgtggaaaccgtggagtataaaaatctcaagttcaccatctgggatgtt
ggagggaaacacaaactcagaccactgtggaagcactactatctgaacacacaagcggtg
gtgtttgtgattgatagctgtcacagagacagactgatggaggctcacagtgaactggcc
aagctgctgactgagaaggagctgagagacgctctactgctcatcttcgccaacaaacag
gacgtccccggtgctgtctcggtggaggagatgacggagctgctgagtctccataagctg
tgctgtgggcggagctggcacattcagggctgcgatgcccgcagtggtactggtctgcac
gagggtctggactggctctcacgccagctggtggccgcaggggttctggacgtggcctaa
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