Silurus meridionalis (southern catfish): 124393855
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Entry
124393855 CDS
T08004
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124393855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124393855
04090 CD molecules [BR:
smeo04090
]
124393855
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Nectin family
124393855
CD molecules [BR:
smeo04090
]
Proteins
124393855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
V-set
I-set
C2-set_2
Amnionless
ig
Ctr
Nucleoside_tran
7TM_GPCR_Srv
DUF4834
DUF6377
DUF6080
DUF2852
Tmemb_9
C2-set_3
Motif
Other DBs
NCBI-GeneID:
124393855
NCBI-ProteinID:
XP_046717854
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All DBs
Position
11:complement(17279098..17283861)
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AA seq
453 aa
AA seq
DB search
MPCTMQYTLNTHIRFLLLITGGLTQCLALKHISVMRGDTLTLTCPIKSMKDAVEWRNPDG
LIMFFNKDKVLKEKRNQFVALTKSKFSIQVTDITFRNGGVYKCLRYNKQASTKRYKVIVV
GAPKLEKFEQEDKVIVKCSASANEHPPKLSWIMDNGLEIHPLPYYELKNASNKFTASSQL
NVNIPKKRVTVKCVVRHPALYGSTVENFIHLGMQNEDTTTSSKHLTTTLGSTESTVIPTI
FSSTSFTNSHSESKTTNDSKTTVNETTEDTSSNGRTSILSNNTTANETTETISETTEGTS
ANKTTEILSETTEGTQLNTSIESSSNNTGNENLHVDRQRKKGNSALLVMLVTCLIICLFV
VLTFFLVRLRKAHVAWKKENEESDQSVESSKSKSSSEERQKQQQRGQGFWNTSFTKYKAE
ETPETETQTTSASVKVDNSQHFISGSGIKETEL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcactatgcagtacacactgaatacacacattcgctttctcttgttgatcaca
ggaggtttaacacagtgcttggcactgaagcatatttcggtaatgcgaggagacactctg
actttgacatgccctatcaaaagtatgaaggatgcagtggagtggagaaacccagatggc
ttaattatgttcttcaacaaagacaaagttttgaaggagaaaaggaaccaattcgtcgct
ttaaccaaatcgaaattttcaatacaagtgactgatataacattcagaaatggaggtgtt
tacaaatgtttacgttacaacaagcaagcctcgacgaaaagatataaagttattgttgta
ggtgctccaaagctggaaaagttcgagcaagaggataaagttattgttaaatgctctgct
tcagcgaatgaacatccacccaaactctcatggataatggacaatggcctagagattcat
cctctcccatactatgagttaaaaaatgcatccaacaaattcacggctagtagccagctg
aatgtcaatattcctaaaaagagagttacagtgaagtgcgtggttcgtcatccagctctc
tacggttccacagtggaaaacttcatacacttaggaatgcagaatgaagacacaacaacc
tcatcaaaacatttaactaccacacttggttctacagagagcacagtcattccaaccatt
tttagcagtacaagcttcaccaatagtcattcagagtcaaaaacaacaaatgacagtaaa
acaacagtaaacgaaaccacagaagacacttcatcaaatggccgcacaagcattttaagc
aacaacactactgcaaatgaaactacagaaacaatatctgaaacaacagagggcacatca
gcaaataaaactactgaaatactatctgaaacaacagagggcacacaattaaataccagc
atcgagtcatcaagcaataatactgggaatgaaaacttgcatgtagacagacaaagaaaa
aagggaaattctgctttgcttgtgatgctggtcacatgcctcatcatctgcctgtttgtg
gtgcttacattcttcctggttcgcctcaggaaagcacatgttgcctggaaaaaagagaat
gaagagtctgatcagtcagtagagagcagcaaatcaaaatctagcagtgaagagaggcaa
aaacagcaacagagaggacaaggcttttggaacaccagtttcacaaaatacaaagcagag
gaaacaccagagacggagactcagaccacatctgcttctgtaaaagtcgataactcacag
cactttatctccggatctggcatcaaagaaactgaactatga
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