Silurus meridionalis (southern catfish): 124393870 Help Entry 124393870         CDS       T08004                                  Symbol actn1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04510   Focal adhesion smeo04520   Adherens junction smeo04530   Tight junction smeo04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:smeo00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124393870 (actn1)    04520 Adherens junction     124393870 (actn1)    04530 Tight junction     124393870 (actn1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     124393870 (actn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:smeo04131]     124393870 (actn1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:smeo04812]     124393870 (actn1)    04147 Exosome [BR:smeo04147]     124393870 (actn1) Membrane trafficking [BR:smeo04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     124393870 (actn1) Cytoskeleton proteins [BR:smeo04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      124393870 (actn1) Exosome [BR:smeo04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    124393870 (actn1)   Exosomal proteins of colorectal cancer cells    124393870 (actn1)   Exosomal proteins of bladder cancer cells    124393870 (actn1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI Uds1 Motif Other DBs NCBI-GeneID:  124393870 NCBI-ProteinID:  XP_046717873 LinkDB All DBs Position 2:complement(26487142..26535846) Genome browser AA seq 922 aa AA seqDB search MDHHNHPHPHQHYDGETNDYMQQEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQI ENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALNFITSKGVKLVSIGA EEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHIS WKDGLGFCALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTAR PDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRR TVPWLENRVPESTMAAMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPA FMPSEGKMVSDISNAWGGLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEG KEAMLNQKDYETVSLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELEYYDSPSV NARCQKICDQWDALGILTQKRSEALQKTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDL QDTFIVHTIEEIQGLSTAHEQFKATLPEADKERQAILGIHNEITKIVQTYHVNITGTNPY TTINPKEINTKWERVRQLVPQRDQALIEEHARQQNNERLRRQFANQANIIGPWIQNKMEE IGRISIEMHGTLEDQLNNLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEH IRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLSEFRASFNHFDRDHSGTLGAEEFR ACLISLGFDIGNDAQKRTGLMDGEDFRTCLISMGYNMGEAEFARIMSIVDPNRLGVVTFQ AFIDFMSRETADTDTADQVMASFKVLAGDKNYITADELRRELPPDQADYCISRMAPYRGS DAVSGALDYMSFSTALYGESDL NT seq 2769 nt NT seq  +upstreamnt  +downstreamnt atggaccaccataatcatcctcatcctcaccagcattatgacggagagacgaacgattac atgcagcaggaggacgattgggacagagacatgctgctggaccccgcctgggaaaaacag cagaggaagacgtttacagcgtggtgtaactctcacctgaggaaagcaggaactcagatc gagaacattgaggaggattttagagacggacttaaacttatgctcctcctagaggtcatc tcaggagagcgtctggctaagcctgagagagggaagatgagagtgcacaagatttcaaat gtgaacaaggctctaaacttcatcactagtaaaggagttaagctggtgtctattggagca gaggaaattgttgatgggaatgctaagatgactctgggaatgatctggaccatcattctc cgttttgccattcaggacatctcagtggaagaaacgtcggccaaagagggacttctgctg tggtgtcagagaaaaactgctccttacaaaaacgtcaacatccagaacttccacatcagc tggaaggatggtttaggattttgtgctcttattcatcgtcatcgcccggaacttatagat tacggcaaactgcgcaaggatgaccctatgaccaacttgaacactgcgtttgatgtggct gagaaataccttgacattcctaagatgcttgatgcagaggatatcgttggtacggcccgt ccagatgagaaggccatcatgacctacgtttctagcttctaccacgccttctccggggcg cagaaggcggagacagcggctaatcgcatctgtaaagttctcgctgtcaatcaggagaac gagcagctgatggaggactacgagaaacttgccagtgatttgttggaatggatcagaagg acagtcccttggctggagaaccgggttcctgagagcaccatggctgccatgcagcagaag ctggaggacttcagagattatcgtcgagttcataaacctcctaaagttcaggagaaatgt cagctggagatcaactttaacacattgcagaccaaactgaggctcagtaaccggcctgcc ttcatgccctctgagggcaagatggtgtcggatatctccaatgcctggggtggtctggag ggggcagagaaaggctatgaggagtggctgctgaatgaaatacgcagactggagagactc gaccaccttgctgagaaattcagacagaaagcagctatacatgaggcctggacagaagga aaggaggccatgttaaatcagaaggactatgagacagtgtctctgtctgagattaaagct ttgctgaagaaacacgaggcatttgagagtgatcttgctgctcaccaggaccgtgtggaa cagattgctgccatcgcccaagagcttaatgagttggaatactatgactctcccagtgtg aatgctcgctgtcagaagatctgtgatcagtgggacgctctgggaattctgactcagaaa cgcagtgaggccttacagaaaacggagaagttgttggagacgattgatcagctgtacctg gagtttgctaaaagggcagcgccgtttaataactggatggagggcgcaatggaggacctg caggacaccttcattgttcacactatcgaggagatccagggcctgagcacggctcatgag cagtttaaagctacactcccagaggcagataaggaaagacaggccatcctgggaatccac aacgagatcaccaaaatcgtccaaacctaccacgtcaacatcactggcactaatccctat accaccatcaatcccaaggagatcaacaccaagtgggagagggtgagacagttggttcct cagagagaccaggcgctgatcgaggaacacgctcggcagcagaacaacgagcgtctgcgc agacagtttgctaatcaggctaacatcatcgggccctggatccagaacaagatggaggag atcggacgtatatcaatcgagatgcacggtacgttggaggatcagctgaataacctgcgt cagtacgagaagagcatcgtcaactacaagccaaagattgatcagctagagggagatcac cagcaaatccaggaggctctcatcttcgacaacaaacacaccaactacaccatggagcac atccgtgttggatgggaacagctcctcaccaccattgctcgcaccatcaacgagatcgaa aaccagattctgactcgtgacgctaaaggcatcagtcaggagcaactcagcgagttcaga gcctcgtttaaccacttcgaccgggatcactcaggcactctgggcgctgaggagttcagg gcgtgtctcatcagtctgggctttgatatcggaaacgacgctcagaagagaacaggcttg atggatggagaggatttccgcacctgtctcatctccatgggttataatatgggtgaggca gagttcgctcgaataatgagcatcgtggatcctaacagacttggggtcgtgaccttccag gcttttattgacttcatgtctcgagaaacagctgatacggacacagctgatcaggtcatg gcttcctttaaagtgctggctggagataagaactacatcacagcggacgagctgaggcgt gaactgccccctgatcaggcggattattgtatctcacgcatggcaccctacagagggagt gatgccgtgtccggggccctcgactacatgtccttctccaccgccctgtacggagagagt gacctctga

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