Silurus meridionalis (southern catfish): 124393887
Help
Entry
124393887 CDS
T08004
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03030
DNA replication
smeo03410
Base excision repair
smeo03420
Nucleotide excision repair
smeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124393887 (rfc3)
03410 Base excision repair
124393887 (rfc3)
03420 Nucleotide excision repair
124393887 (rfc3)
03430 Mismatch repair
124393887 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124393887 (rfc3)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124393887 (rfc3)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124393887 (rfc3)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124393887 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
124393887 (rfc3)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124393887 (rfc3)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124393887 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
124393887 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
ABC_tran
zf-HC2
Motif
Other DBs
NCBI-GeneID:
124393887
NCBI-ProteinID:
XP_046717890
LinkDB
All DBs
Position
11:13695197..13702327
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANHLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSIVAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSTEEVCSVLMSVCKKEGLLLPAELARQVAEKSGRNLRKALLMCEACRVQQYPF
SADQEIPATDWEVYLRETANAIVNQQSPQRLLEVRARLYELLTHCIPAEIIMKGLVTELL
SNCDGHLKPEVAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggttgataagtacagaccaacctctctggccaaactggattatcacaag
gagcaagcaaatcatctgaaaaatctggtccaatgtggagatttcccgcacttgcttgtt
tatggtccatctggcgctggcaaaaagacaagaattatgtgtcttcttcgtgagctgtat
ggtgctggagtggagaagctccggattgaacaccagtccattgtagctccatctaaaaaa
aagattgaaatcaacacaattgccagtaactaccatttggaggtgaatccaagtgatgca
ggaaatagtgatcgtgttgtcatccaagagctgatcaaaacagtcgctcagtcacagcag
atacaatccagcacacagcgagagttcaaagtggtgctgctgacggaggtggaccggctc
actaaagatgcacagcatgccctgcgtcgtacaatggagaagtacatgtccacctgtcgc
ctcatcctgtgctgcaactcaacctctaaagtgatctcccccatcaggagcaggtgcctg
gctgtgagagtcccactacccagcactgaggaggtatgcagtgttctgatgagtgtatgc
aaaaaggaagggcttcttctcccagctgagctggccagacaggttgcagagaagtcgggc
cgcaaccttcgaaaagctcttcttatgtgtgaggcctgtcgagtgcaacagtatcctttc
tctgcagatcaggaaatccctgcaacagactgggaagtgtacctcagagaaacagctaat
gccattgtcaaccagcaaagcccacaaagacttttggaggttcgggcaagactttatgaa
ctactaactcactgcattccagcagaaatcatcatgaaggggcttgtgactgagctgctc
agtaactgtgatggccacctgaaacctgaggtggctcaaatggcagcctattacgaacac
agactacagttgggcaacaaagccatttatcacttggaggccttcgtggcaaagttcatg
gccatctataagaagttcatggaggatggtcttgacaacttcatgttctga
DBGET
integrated database retrieval system
