Silurus meridionalis (southern catfish): 124393923
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Entry
124393923 CDS
T08004
Symbol
chsy3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smeo01100
Metabolic pathways
Module
smeo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124393923 (chsy3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124393923 (chsy3)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
124393923 (chsy3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
124393923 (chsy3)
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
O-Glycan
124393923 (chsy3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
124393923
NCBI-ProteinID:
XP_046717942
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Position
11:complement(18706726..18754686)
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AA seq
809 aa
AA seq
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MALRSRKAWTNVMLGILLGFTAASWVLVPRVTEVKKCSPYSVGKIQEPARPRMTNDVWPE
SLHKPSSSRERSYEEEDEEQRADTPIQGGPVPRPRHFLYVGVMTAKKYLDSRAVVVFKTW
APSIPGKVEFFSSHGSDSVPLPFPLPVVSLPGVDDSYPPQKKSFMMLKYMHDHYLDKYEW
FMRADDDVYIRGEKLELFLRSLNSSKPMYLGQTGLGTTEELGKLALEPGENFCMGGPGMI
FSREVLRKMVPHIGTCLKEMYTTHEDVEVGRCIRRFGGTQCVWSYEMQELFYENYEHKKG
FIEELHSSKIHNAITLHPNKRPAYQYRLHNYMLSRQISQLRYHTIQLHRESMTMSHLSNT
EVQLEDQQLGAPPSYMRYQPNERADVIEWEFLNGRFLYSTSEKNMPRQGLGNALRSALED
TVLQVMEMINENSKVRGRVIDFKKIQYGYRRVNPLQGAEYILDLMLLYKRHKGRKVTVPV
RRHVYLQQSFSRPYFTEAEQLDVSELVEAINSDFQSFSLLSNSLKIFYPFQFSDSNREMR
EQGQKKLHILVPLTGRYDTFVRFMENFEKVCLISNQNVKLIIILVDNDSNQDKEKHLDLI
KEYYNKYPKADLSVIPMTGEFSRGLALEMGASGLNNSSLLFFCDVDLVFSSDALQRCREN
AIEGRQAYFPVVFSQYSPKIVFAGSRAEENNYVFTKKSGFWRDYGFGITCIFKSDLLKAG
GFDTSIQGWGLEDVDLFTKIINSDVKVFRSQEPGIVHVYHPVQCNSNLDPKQYKMCLGSK
ASTYASAMQLAELWLEKHLGIGYRNRTSS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaggtctagaaaagcgtggaccaatgtgatgctggggattttgctcggcttc
actgcagcatcttgggtcctggtcccccgggttacagaggtcaaaaagtgctcaccctac
agtgttgggaaaattcaagaacccgcaagacctcggatgacaaacgacgtctggcccgag
agcctgcacaaaccatcgtccagcagagagagaagctatgaagaggaggatgaggagcaa
agagcggacacgccaatccagggaggacccgttccacgtcccagacacttcctctacgtt
ggagtcatgaccgctaagaagtacctggattcgagagcggtggttgtgtttaaaacgtgg
gcaccgagcatcccgggaaaggtcgagtttttctccagccatggctcggactctgtgcct
ctacctttcccgctgcctgtggtctcgttgccaggggttgacgattcgtacccgccgcag
aagaagtccttcatgatgttgaagtacatgcacgatcactacctggacaaatacgagtgg
ttcatgagggctgacgatgacgtctatatccgaggtgaaaagctggagctctttttgcgt
tcgctcaacagcagtaagccaatgtatcttggtcagacgggtctaggcactactgaagaa
ctgggcaagttggcgctggagcctggggagaatttttgcatgggtggccctggtatgatc
tttagccgcgaggtgctgcgcaagatggtgccccatatcggcacttgtctgaaggagatg
tacacgacgcacgaggatgtagaagtaggacgctgcattcggcgattcgggggaacccag
tgcgtctggtcgtatgagatgcaggaactgttctatgaaaactacgaacacaagaaaggc
ttcatcgaggaactacatagcagcaaaattcacaatgccatcactctgcaccctaataag
cgcccggcgtaccagtaccgactgcacaactacatgctcagccgtcagatctcgcagctg
cgctaccacaccatccagctgcaccgtgagagcatgaccatgagccacctcagcaacacc
gaggtgcagttggaggaccaacagctaggcgcacccccttcctacatgcgctaccagccg
aacgaacgagcagacgtcatcgagtgggagttccttaacggaaggttcctgtactccact
agtgagaagaacatgcctcgacagggtctcgggaacgccctgcgctctgctttagaggac
actgttctccaggtgatggagatgataaacgagaactccaaagtcagaggccgtgtcatt
gactttaaaaagattcagtatggatataggagggtgaatccactacaaggagctgagtac
atcctggatctcatgctgctctataagaggcacaaaggacgaaaagtgaccgtgccggtt
cgtagacatgtctaccttcagcagtcttttagcaggccttattttactgaagctgagcag
ctagatgtatctgaactagtcgaggcaatcaatagtgactttcagtcgttttcacttctg
tccaattcactcaagatcttttacccttttcagttttcggactctaacagagagatgcga
gagcaaggacaaaagaagctgcacatcctcgtaccgcttacaggtcgctacgatacgttt
gtgcgcttcatggaaaacttcgaaaaggtctgccttatttccaaccagaatgtaaaacta
atcatcatcctggtggacaatgatagcaaccaagacaaggagaagcatttggacttgatt
aaggagtactataataaataccccaaagcagatctgtctgtgataccaatgacaggcgag
ttttctaggggtctcgccttagaaatgggtgcctctggccttaataatagctccctgctg
tttttctgtgacgtcgatctagtcttcagtagtgacgcactccagagatgtcgtgaaaac
gccattgaaggaaggcaggcctattttcctgtcgtgttcagccagtacagtcccaaaatc
gtcttcgccgggagccgtgccgaagaaaacaactatgtcttcaccaaaaaatccggtttc
tggcgagattatggctttggcatcacctgcatatttaaaagtgacttgctgaaagccggc
gggttcgacacttcgatacaaggctggggactggaggatgtcgacttgttcacaaagatc
attaactccgatgttaaagtgttccgttcacaagaacctggcatagtgcatgtttatcat
ccggtccaatgtaattctaatctagaccccaagcaatacaaaatgtgcctgggttccaaa
gcgagtacgtatgcatctgcgatgcagttagccgaactgtggctggagaagcatttaggc
atagggtacaggaatagaacttcctcttga
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