Silurus meridionalis (southern catfish): 124393937
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Entry
124393937 CDS
T08004
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124393937 (dcaf5)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124393937 (dcaf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124393937
NCBI-ProteinID:
XP_046717962
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All DBs
Position
2:complement(26546221..26558625)
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AA seq
759 aa
AA seq
DB search
MKEVQGCGMRCSLGFLSSRMMSGRPLLKEDFQRRRLAGCNSLYRRDMLGHYGCVNAIEFS
NNGGQWLVSGGDDRRVLLWDMEKALQSQAKPVKLKGEHLSNIFCLAFDSTNTRVFSGGND
EQVILHDVERGETLNVFLHDDAVYGLSVSPVNDHVFASSSDDGRVLIWDTREPPHGEPFC
LANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSLQSAMSVRFN
SAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDF
NLYMWKIPNDPESVGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKVWSPYQ
QPECAGDLEGRVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSEQEDPRMMAFFDSLVR
REIEGWSSDSDSDLSEGAILQLHARGRGHARAANHGATTNQTPPTETIGSRQSDSDHSSS
SSSSSSLLSPPASESERVDPDTVGSHRRRRAGSRRASSFLLDVVNEDSDSSSFWLDPLPR
PRSPSPRENSSLSRTSSPSSSSSSSSTTSSNSDGEEAELQRSRVRQHNAARKQGRTRWSC
LDSAQSIQSATDYSNYPKISLHDSTSPSSSGDESRLVRFGSKNKGRGITPSPGPSSESHA
ETQLRGRWFGVMDRAQSRVGQREELGAGRSSEDELNSSGLYGNSSAYDETCVDSTLPESS
EGAEPDANSEPAGSRTGKRTRFRSEPEEGEPPSEKKLKT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtgcagggctgcgggatgcgatgctcactgggcttcctgtccagcaggatg
atgagcggccgtccgctgctaaaggaggacttccagcgccgtagactggcgggctgtaac
agcctctaccgccgcgacatgctgggtcactacggctgtgtcaacgccatcgagttctcc
aacaacgggggacagtggctggtgtccggtggtgatgaccggcgtgtgttattatgggac
atggagaaagctctacagtctcaagccaaaccagtcaaactgaagggggagcacttgtct
aacatcttctgccttgcctttgacagcaccaatacacgtgtcttctccggggggaatgat
gagcaggtgattctgcatgatgtggagcgtggtgagactctgaacgtgtttctccatgac
gacgctgtatacggtctctctgtcagccctgttaatgatcacgtgtttgccagctcctca
gatgatggccgggttctcatctgggacacacgggaacccccccatggagagccattctgc
ttggcgaattatccctctgcgttccacagtgtgatgtttaaccctgtggagccacgcctt
cttgcaacagccaactctaaagagggcgtcggcttgtgggacatccgcaaaccacggagt
tctctgttgcggtacggagggtctctctctctgcagagtgcgatgagtgtgcgctttaac
agtgcagggacgcagcttcttgctctgcgcagacgtctgccccctgtcctgtacgagctg
cactctcgcctgcccagcttccagttcgacaaccagggctacttcaactcctgcaccatg
aagagctgctgcttcgctggggaccgtgaccagtacatcctgtccggctctgatgacttt
aatctctacatgtggaaaattcccaatgacccagaatcagtgggtcgggtggttaacggg
gcatttatggtgttgaagggtcatcgctccattgtgaatcaagttcgctttaatccacac
acctacatgatctgttcctctggagtagagaaggttatcaaggtgtggagcccataccag
cagccagagtgtgcaggtgatctggagggtcgagtggaggataagtctcgctctctctac
acccatgaggagtacatcagcctggtgctgaacagcggcagtggcctgtcacatgactac
gtgagccaatcagagcaggaggatccacgcatgatggccttctttgactctcttgtgcgg
cgtgagatcgaaggctggagttctgactccgattccgatttgagtgaaggcgccattctg
cagctgcatgccagggggcgtggccacgctcgtgccgctaaccatggcgctaccacgaat
cagactccgcccaccgaaacaatcggcagtcggcaaagcgactcggatcattcctcttcc
tcatcctcctcctcgtccttactttcccctcctgcttccgagagtgagcgggtggatccc
gataccgtaggctcacacaggcggagaagggcggggtcacgacgagcatcctcattccta
ttggatgtggtgaacgaggactcggattctagtagtttctggttggacccgttgcctcgc
ccgcgttctccgagtccgcgtgagaactctagcctctctaggacctccagtccaagctcc
tcgtccagctcatcctctaccacctcgtctaacagtgatggagaagaggcggagcttcag
aggagcagagtgcgtcagcataatgcagcgaggaagcagggccgaacgcgctggtcatgc
ttagactctgcccagtctattcagagcgccactgattacagcaactaccccaaaatatca
ctgcatgattcaacatctccttcctcctctggcgatgagagccggctagtcagatttggc
agtaaaaacaaggggcgtggcatcacccctagccccggcccttcttcagagagccatgca
gaaacacagctccgaggtcgttggtttggagtcatggacagggctcagtccagagttggt
caaagggaagaactgggggcaggaagaagcagcgaggatgaactgaacagctcagggttg
tatggaaactccagcgcttatgatgagacctgtgtagactcaactcttccagaatcctcc
gaaggggcggagcctgatgctaactctgagccagcaggatctaggactggaaaacggaca
cgtttcagatccgaaccagaagagggggaacctccatcagaaaaaaagctgaagacgtga
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