Silurus meridionalis (southern catfish): 124394107
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Entry
124394107 CDS
T08004
Symbol
rhoca
Name
(RefSeq) ras homolog family member Ca
KO
K04513
Ras homolog gene family, member A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04081
Hormone signaling
smeo04144
Endocytosis
smeo04150
mTOR signaling pathway
smeo04270
Vascular smooth muscle contraction
smeo04310
Wnt signaling pathway
smeo04350
TGF-beta signaling pathway
smeo04510
Focal adhesion
smeo04520
Adherens junction
smeo04530
Tight junction
smeo04621
NOD-like receptor signaling pathway
smeo04625
C-type lectin receptor signaling pathway
smeo04810
Regulation of actin cytoskeleton
smeo05100
Bacterial invasion of epithelial cells
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124394107 (rhoca)
04350 TGF-beta signaling pathway
124394107 (rhoca)
04150 mTOR signaling pathway
124394107 (rhoca)
09133 Signaling molecules and interaction
04081 Hormone signaling
124394107 (rhoca)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124394107 (rhoca)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124394107 (rhoca)
04520 Adherens junction
124394107 (rhoca)
04530 Tight junction
124394107 (rhoca)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124394107 (rhoca)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124394107 (rhoca)
04625 C-type lectin receptor signaling pathway
124394107 (rhoca)
09153 Circulatory system
04270 Vascular smooth muscle contraction
124394107 (rhoca)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124394107 (rhoca)
05100 Bacterial invasion of epithelial cells
124394107 (rhoca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124394107 (rhoca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124394107 (rhoca)
04031 GTP-binding proteins [BR:
smeo04031
]
124394107 (rhoca)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124394107 (rhoca)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124394107 (rhoca)
Exosomal proteins of other body fluids (saliva and urine)
124394107 (rhoca)
Exosomal proteins of colorectal cancer cells
124394107 (rhoca)
Exosomal proteins of bladder cancer cells
124394107 (rhoca)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
124394107 (rhoca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
124394107
NCBI-ProteinID:
XP_046718179
LinkDB
All DBs
Position
1:complement(17379632..17396234)
Genome browser
AA seq
193 aa
AA seq
DB search
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDDHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAALQ
VRKRKKRGGCLIL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatacggaaaaagctggtgatcgtgggagacggagcatgtggaaagacctgt
ctactaatagtcttcagtaaggatcagttccccgaagtctacgtgcccactgtgtttgag
aactacattgctgacattgaggtggatggcaaacaggtggagctggccctgtgggacact
gcaggtcaggaggactatgaccgcttgagaccactttcctacccagacacagatgtcatt
cttatgtgcttctctatcgacagtcctgacagtttagagaatattccagagaagtggacg
ccagaggtgaaacacttctgccccaacgttcccataattttggtggggaataagaaggac
ctgcgcaacgacgaccatactcggagagagctggctaagatgaaacaggagcctgttaaa
cccgaggaaggccgcgacatggccaaccgcatcagtgccttcggttacctggagtgctcg
gccaagaccaaggagggtgtgagggaagtgtttgaaatggccacaagggcggcgctgcaa
gtccggaagaggaaaaagaggggcgggtgcttgatcctgtga
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