KEGG   Silurus meridionalis (southern catfish): 124394107
Entry
124394107         CDS       T08004                                 
Symbol
rhoca
Name
(RefSeq) ras homolog family member Ca
  KO
K04513  Ras homolog gene family, member A
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04081  Hormone signaling
smeo04144  Endocytosis
smeo04150  mTOR signaling pathway
smeo04270  Vascular smooth muscle contraction
smeo04310  Wnt signaling pathway
smeo04350  TGF-beta signaling pathway
smeo04510  Focal adhesion
smeo04520  Adherens junction
smeo04530  Tight junction
smeo04621  NOD-like receptor signaling pathway
smeo04625  C-type lectin receptor signaling pathway
smeo04810  Regulation of actin cytoskeleton
smeo05100  Bacterial invasion of epithelial cells
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    124394107 (rhoca)
   04350 TGF-beta signaling pathway
    124394107 (rhoca)
   04150 mTOR signaling pathway
    124394107 (rhoca)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    124394107 (rhoca)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124394107 (rhoca)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124394107 (rhoca)
   04520 Adherens junction
    124394107 (rhoca)
   04530 Tight junction
    124394107 (rhoca)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    124394107 (rhoca)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    124394107 (rhoca)
   04625 C-type lectin receptor signaling pathway
    124394107 (rhoca)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    124394107 (rhoca)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124394107 (rhoca)
   05100 Bacterial invasion of epithelial cells
    124394107 (rhoca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124394107 (rhoca)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124394107 (rhoca)
   04031 GTP-binding proteins [BR:smeo04031]
    124394107 (rhoca)
Membrane trafficking [BR:smeo04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    124394107 (rhoca)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124394107 (rhoca)
  Exosomal proteins of other body fluids (saliva and urine)
   124394107 (rhoca)
  Exosomal proteins of colorectal cancer cells
   124394107 (rhoca)
  Exosomal proteins of bladder cancer cells
   124394107 (rhoca)
GTP-binding proteins [BR:smeo04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    124394107 (rhoca)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 124394107
NCBI-ProteinID: XP_046718179
LinkDB
Position
1:complement(17379632..17396234)
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDDHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAALQ
VRKRKKRGGCLIL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcagccatacggaaaaagctggtgatcgtgggagacggagcatgtggaaagacctgt
ctactaatagtcttcagtaaggatcagttccccgaagtctacgtgcccactgtgtttgag
aactacattgctgacattgaggtggatggcaaacaggtggagctggccctgtgggacact
gcaggtcaggaggactatgaccgcttgagaccactttcctacccagacacagatgtcatt
cttatgtgcttctctatcgacagtcctgacagtttagagaatattccagagaagtggacg
ccagaggtgaaacacttctgccccaacgttcccataattttggtggggaataagaaggac
ctgcgcaacgacgaccatactcggagagagctggctaagatgaaacaggagcctgttaaa
cccgaggaaggccgcgacatggccaaccgcatcagtgccttcggttacctggagtgctcg
gccaagaccaaggagggtgtgagggaagtgtttgaaatggccacaagggcggcgctgcaa
gtccggaagaggaaaaagaggggcgggtgcttgatcctgtga

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