Silurus meridionalis (southern catfish): 124394229
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Entry
124394229 CDS
T08004
Symbol
rab6bb
Name
(RefSeq) RAB6B, member RAS oncogene family b
KO
K07894
Ras-related protein Rab-6B
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124394229 (rab6bb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124394229 (rab6bb)
04031 GTP-binding proteins [BR:
smeo04031
]
124394229 (rab6bb)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
124394229 (rab6bb)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124394229 (rab6bb)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
124394229 (rab6bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
SRPRB
FeoB_N
Gtr1_RagA
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
124394229
NCBI-ProteinID:
XP_046718325
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All DBs
Position
12:24805182..24820585
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AA seq
257 aa
AA seq
DB search
MRSKTQDLSAAPSNVSGPRASSFSRPWSVSALGRGDPCGTSRGYTSRAVMSVANEFGNPL
RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG
QERFRSLIPSYIRDSTVAVVVYDITNVNSFQLTTKWIDEVRTERGSDVIIMLVGNKTDLE
EKRQIMIEEGEQRAKELNVMFIETSAKSGCNVKQLFRRVAAALPGMENLDEANKEGMIDI
KLDKAQEPPASESSCSC
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtaagacgcaggacttgagcgctgcaccatccaacgtgtccggaccccgagcc
tcatccttcagccgcccgtggagcgtctctgccctggggaggggagatccgtgcggaaca
tcgcggggatacacatccagagccgtcatgtctgtagccaacgagtttggaaacccttta
cggaaatttaaacttgtttttttaggagaacagagcgttggaaaaacgtcgctgataacg
cggttcatgtacgacagcttcgacaacacttatcaggccaccatcgggatcgacttcctg
tcaaaaaccatgtacctggaagatcgaacggtgaggttacagctgtgggatacggcgggg
caggaacgctttaggagcctcatccccagctatatacgagactctactgtagccgtggtt
gtgtacgacatcacaaatgtgaattccttccagctgaccacaaaatggatcgacgaggtc
aggacggagagaggaagtgacgtcatcatcatgctcgtcggcaacaagacagacttggag
gagaagagacaaatcatgattgaggaaggagaacagagagctaaagaactgaacgtgatg
ttcatcgagacgagcgctaaaagcggctgcaacgtcaaacagttgtttaggcgagtagct
gctgctctgcccgggatggaaaatctggatgaggcgaataaagaaggcatgattgacatc
aagctggacaaagcccaggagcctcctgccagcgagagcagttgctcatgttag
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