Silurus meridionalis (southern catfish): 124394250
Help
Entry
124394250 CDS
T08004
Symbol
ppifa
Name
(RefSeq) peptidylprolyl isomerase Fa isoform X1
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124394250 (ppifa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smeo03110
]
124394250 (ppifa)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
124394250 (ppifa)
Chaperones and folding catalysts [BR:
smeo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124394250 (ppifa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
124394250
NCBI-ProteinID:
XP_046718343
LinkDB
All DBs
Position
2:17237730..17242045
Genome browser
AA seq
189 aa
AA seq
DB search
MLQMKNRLKYSSLAIAAGRLLPGTVRNPLVFLDIAADGEFIGRIIIELNADVVPKTAENF
RALCTGEHGFGYKGSIFHRIIPEFMCQGGDFTNHSGTGGKSIYGQKFKDENFKLKHTGPG
VLSMANSGPNTNGSQFFICTAKTEWLDGKHVVFGQVKEGMETVRVMESYGLHDGGTLQKI
VITDCGELK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaatgaaaaaccgattaaaatattcttctctcgccatcgccgccggcagactg
ctgccaggaaccgtgcggaatccgctggtcttcctggacattgcggctgacggcgagttt
attggcagaattataattgaacttaatgcagatgtggttcccaaaacagcagagaacttc
agagcgctgtgtacaggagagcatgggtttggatataaaggttccatattccatagaatc
attcctgagttcatgtgccagggtggagatttcacgaatcacagtggcactggtggaaaa
tccatatatggacagaaattcaaagatgagaattttaagttgaaacacactggaccaggt
gtgctgtcaatggcgaactctgggccgaacaccaatggatctcagttcttcatctgcact
gccaaaacagaatggcttgatggcaaacatgttgtgtttggtcaagtgaaagagggcatg
gagaccgtcagggtaatggagtcatatggtttgcacgacggaggaacacttcagaagatt
gtcatcacagactgtggggaactaaaataa
DBGET
integrated database retrieval system
