Silurus meridionalis (southern catfish): 124394344
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Entry
124394344 CDS
T08004
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124394344 (chd7)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124394344 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
124394344
NCBI-ProteinID:
XP_046718435
LinkDB
All DBs
Position
12:26405299..26469755
Genome browser
AA seq
2961 aa
AA seq
DB search
MADPGMMSLFGDDGNLFSDGLESLGDCGYSSQSQANPMNQQMTHEHQAYSQIPSSLHLST
PSVPPQPKMGHHFDHFGQYDPQGGRMSANGPGPGQGPGPANGISSPHSRYHGGNGTAGGH
HVYPGAQGDGRGGGPGVGQSFQDGGETAPGNNWGPQGIQMPDQNQFPQAQQQQVHSHQLG
PYMGRSEFGGMQGHNQTQTPPRMNHFSQGLSQEANRFIGHMVTNMASSALRHPSQTPQHQ
QAGQQFLHHPESQFPQSPSKQQQQQQQMISGRGHQNIGFSMNNQQVANSSSGQYAPYPQY
GNLNQGLANASGMSLNTSNNPNAPVQCYPTPAGPQCYPVNQLPPQNIHPTQPKMSQQQHL
APPPPPQGSYASPPSMSPMRNLGGNPAGTPPPQRGQGPISHPQQHPQMYGTLSPNQRAMN
APNQAEVLPQQLQTSGLQFQQVQQVRTPPAHSVPQQPLGSSPPPTLLRNWVSNPHSSPPA
NHQQVPHMQHSPSDASQTPSSTHMSTPSSSLHTGSCESHPPGSEPKPKKKKKKKAKVGEV
AVGEKDEDVSMDVGGVLRGSVGDGEMSPPEKKSKKKPKQKEAKDAKEPKTPKTPKTPKTP
KELKEKVKTTAPKSKSSKKPSSKKADTESSSKKEGKRKRESSVTSDTEKTPPPSPEEEED
DGVQKRRSSRQVKRKRYTEDLEFRISDDDDEDSAGPKSPSTTSEQTEVLDAEGPVVEKIM
GLRTVKKQLESGQEVEIEEFYVKFKSFSYLHCRWADLEELEKDKRIHQKVKRFKAKQAHN
NFLTEMDDEPFNPDYVEVDRVLDVSENTDENGEPVSLYLVKWCSLPYEDSTWELKADIDA
GKIEEFEQVMSREPQLKRVERPPASDWQKSESSREYKNSNALREYQLEGVNWLLFNWCNT
RNCILADEMGLGKTVQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY
HGSQASRRTIQAYEMNYRDAQGRVIKGAYKFHAIITTFEMILTDCPELRSVPWRCVIIDE
AHRLKNRNCKLLEGLKLMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFMQEF
GDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF
TFLSKSGGGAGGGGGGGSSSVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRENHAADL
ADFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERID
GRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ
ARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSK
KEIEDLLRKGAYGALMEEEDEGSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVSS
GNRTDISLEDPDFWQKWAKKAELDLDVINGRNTLVIDTPRVRKQTRHYSSIKEDEMMEYS
ELESDSEEKPIQKARRPQDRAQGYPRSECFRVEKNLLVYGWGRWKDILSHGRFKRPLHER
DVELICRSLLAYCLLHYRGDENIKSFIWDLITPTEDGQSKTLTNHSGLSAPVPRGRKGKK
GKLAVTQMNMPQADWLAECNPDVLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDLA
DRILEGADFSELDIWIPHPLHAEVPTDWWDVEADKSLLIGVFKHGYEKYNSMRADPALCF
LERVGMPDAKAIAAEQRGADVVADGEDEDPEYKPMRMPFKDDLDDFTNSPLDEKEEVMEV
ESVEAPKASENGGKGGNLYWPAASALTARLRRLITAYQRCHKRQDMLIKPDGRRRRRHRD
DHLLSMAVEGGAFSLEPSRVAATAYLTEGASFVKTSPFLHESAALLADGAAFFKERRQRW
TRREEADFYRVVSTFGIVYDVQRQQFDWTQFRVFARLDKKTDESLEKYYYAFVAMCKRVC
RMQVKDPAEGLADPTLIIDPITEERASRTLYRIELLRRIREQVLPHPELEERLRLCQPSP
DLPAWWEAGKHDRDLLHGAAKHGVSRTDYHIQNDPDLSFLQAQRKFLQSRGAETSLTSNP
VTTVDLIKDEEQKDELKYENVEKVDLKELKEEKTEAASLKQEVKTEEEEKNQKEEKTEEE
NGAEVKSEDHGVPQMADEKVVIESEDTPALPVNKDVNKEEPENPTCSEPNTEKNSEEEEE
EEKMDEDDKSEKSSQAEAGASSDRKNFDEESNASMSTARDETRDYFGMDDVEPTVSNAFG
ERSVFSFWPKDRVMINRMDNICEAVIKGKWPSNRKQFFDLPGLLPGFGAMATDSPLPRRS
MGDLSMINQSSYSGSDDITMSPQVNKDEALSLSVPRQRRRRRRKVEIEAERAAKRRNLMD
MVAQLRESHSADGQTRAMDLTKALHGLAPSSSSSSSSVFPGAGASPMELLHAAGASRTNG
AMLEAEIPTRRRRGRRKNVEGMELLFMGNKSSQLNTEESNGAKGFAEGAHVPTRATRHIP
APAQKEESEHLKGEDGASTKDLQEWLRQHPTYTMDVPGFIPKSEELLLSQLGKPKQKRHR
CRNPNKIDINTLTGEERVPVVNKRNGRKMGGAMAPPMKDLPQWLAENPEFAIAPDWTDIV
KQSGFLPEAMFDRLLTGPVVREEGVRRRGRRPKSEIAKAAAAQASLSAASSASTSGMNPF
LLNGLFGGMDLGSLQNLQNLQNLQLLMGLSPSLGAGAADNKNATTMLPLMLPAMGALPNV
FSLGGLFGGNMATAAAANLNTNATATSSETEETNKDGEPKEDCEEKKGEVEKPAETDSNT
TSAAAATNLSANPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLGLTGFSPAALAELQNAMS
GALGATGEEREKEEDKETGQNPDAVKPSSTVENSDSEEGENKTEDLSGMAEELDSIEAGE
EEDEDEDDDEEVGDDEEDKSD
NT seq
8886 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccgggaatgatgagtctcttcggagatgatgggaatttattctcggatggt
ttagaaagtttgggggattgtgggtactcctcccaaagccaagccaatcccatgaaccaa
cagatgacacacgagcaccaagcttacagccagattccttcttcgctccacctttctaca
ccttctgttccacctcagcccaagatggggcaccactttgatcacttcggacagtatgac
ccccaaggaggtcgcatgagtgctaacggcccgggcccgggccaaggcccaggccctgct
aacgggatctcctctcctcattcacgctatcatggcggaaatggcacagctggtggacac
cacgtttatccaggagcacagggtgatgggagaggtggaggaccaggagtggggcagtca
ttccaggatggtggagaaactgcacccgggaataactggggtcctcaaggaattcagatg
cctgaccaaaatcagtttccccaggcacaacagcagcaagttcatagtcatcaattaggc
ccttacatgggtcgctctgaatttggtggtatgcaagggcacaaccagactcagactcct
cccaggatgaaccacttctctcaaggtttgtctcaggaagcgaaccgttttataggacac
atggtgaccaatatggcatcttctgccttgcggcatccgtctcagactccacagcatcag
caggctggtcagcaatttcttcatcatccagagtcacagtttccccaaagtccttcaaag
cagcagcagcaacagcagcagatgattagtgggcgaggccaccagaacataggctttagc
atgaacaaccagcaggttgctaacagcagctcaggtcaatatgctccttatcctcaatat
ggcaacctaaatcagggattagccaacgcttcagggatgagcctcaacaccagcaacaac
cccaatgcccctgtgcagtgttaccccacccctgcagggccacagtgttacccagtcaac
cagttacccccccaaaatatacatccgacgcagcccaaaatgtcacagcagcaacatctt
gctcctccaccacctcctcagggatcatatgcttctccaccttccatgtcacctatgagg
aacctggggggaaaccctgctggaactccacctcctcaaagaggccagggtccaatctca
cacccacagcagcacccccagatgtatggcaccttgtcacccaatcagagagctatgaat
gcacctaaccaagcagaggttctccctcagcagctgcagacatctggcttacagttccag
caggtgcagcaggtaagaactcctcctgcacactctgtgccccagcagcccctgggctct
tctcctccaccaaccctgctgaggaactgggtctccaacccacactcgtcaccaccagct
aaccaccagcaagtgcctcacatgcagcattctccatcagatgcttcccaaaccccatcc
tccacccacatgtccaccccaagctcctccctgcacacaggtagctgtgagtctcatccc
cctggcagtgagcccaagcccaagaagaagaaaaagaagaaggcaaaggtgggtgaggtg
gcagtgggggagaaggatgaggatgttagcatggatgtgggtggagtattaagaggctca
gtaggtgatggcgagatgtctccaccggaaaagaagagcaaaaagaaaccaaagcagaag
gaggccaaggacgcgaaagagcccaagactcccaaaaccccgaaaactcccaaaacaccc
aaagaactgaaggagaaggtcaagacgaccgcacctaaatccaagagctccaagaagcct
agcagtaagaaggccgacactgagagcagcagtaagaaggaagggaagaggaagagagaa
tcatcagtcacctcagatacagagaaaactccacccccttctccagaggaggaggaggat
gatggagttcagaagcggcgctcgagccgacaggtgaagagaaagcgctacactgaagat
ctggagttcaggatctcggatgatgatgacgaagattctgctggacccaaatctccttct
accacatctgaacaaacggaggtgcttgatgctgaaggtcctgtggtggagaagatcatg
ggactgcgtacggtaaagaaacagctggagtcaggacaggaagtggaaatcgaggaattt
tacgtcaaattcaagagtttctcgtacctgcactgtcgctgggctgatctggaggaactt
gagaaagataagagaatccaccagaaagtgaagcgctttaaagccaaacaggcacataac
aacttcctcacagagatggacgatgagccgtttaacccggattatgtggaggtggatcgt
gttctggatgtttctgagaacacagatgaaaatggagagccggtgagtctgtacctggta
aagtggtgttccttgccgtatgaggacagcacttgggagctgaaggctgacatcgatgca
gggaagattgaggagtttgagcaagtgatgagtcgtgagccgcagctaaagcgtgtggag
cgacctccggctagcgactggcagaaatccgagagttcccgggaatataaaaacagcaac
gcactcagggaataccagctggagggagtcaactggctcctgttcaactggtgtaacaca
cggaattgtatcctggcggatgagatgggtttggggaagactgtgcagtccatcacattt
ctgtatgagatctacctgaaggggatccatgggccattcctggtcatcgctccactttct
acaattcccaactgggagcgagagttccggacgtggacagagctcaacgttgtggtgtat
catggcagtcaggccagtcgcaggaccatccaggcctacgagatgaactacagagatgct
cagggtcgtgtgataaagggagcctataaattccatgccatcatcacgacgtttgagatg
attctgactgactgcccggagctgcgcagtgtgccgtggcgatgtgtgatcatcgacgag
gctcacaggctgaagaataggaactgtaaactgcttgagggactcaagctcatggacatg
gaacacaaggttctcctgacaggaaccccactgcagaacactgtggaagaactctttagc
ctcctgaacttcctggagccagatcgctttccctcagagtccaccttcatgcaggagttt
ggagacctcaaaactgaagaacaggttcagaagcttcaaggaatcctcaaacccatgatg
ctgcggagactgaaagaggatgtggagaaaaacctggcaccaaaagaggagaccatcatc
gaggtggaactcacaaacatccagaagaaatactacagagccatcctggagaagaacttc
accttcctctccaagagtggaggaggagcaggaggcggaggcggaggaggatcatcaagt
gtccccaacctccttaacaccatgatggagctgcgcaagtgctgcaaccacccctacctc
atcaacggagcggaggagaagattatggaggagttccgagagaaccacgcggctgatctt
gccgatttccacttgcaggcaatgatccaggcagcagggaagctggtgcttatcgataag
ctcctccccaaactgaaggctggaggccaccgtgtgctcatcttctcccagatggtgcgc
tgtctcgacatcctggaggattacctcatccagagacggtatccgtatgagcgtattgat
ggcagagtgagaggaaatctgcgccaggctgctattgatcgtttttcccgtcctgattcg
gaccggtttgtgttcctgctgtgtactcgggccggagggctgggcatcaacctgaccgct
gctgacacctgcatcatcttcgactcggactggaacccccagaacgacctgcaggcccag
gctcggtgccaccggatcggtcagagcaaagcggtgaagatttatcgcctgatcaccagg
aactcgtacgagagggagatgtttgacaaggccagtctgaaactgggtctggataaagcc
gttctgcagtccatgagcgggagagagaacgctgctaacggggttcagcagctgtccaag
aaggagattgaggatctgctgcgtaaaggagcttatggagctctgatggaggaggaggat
gagggctccaagttctgtgaagaggatattgatcagatcttacaaagacgcactcagacc
atcaccatcgagtccgagggcaagggctccaccttcgccaaggccagcttcgtgtcctca
ggaaacaggacagatatttccctggaggatccagacttctggcagaaatgggcaaaaaaa
gctgagctggacctggacgtcattaacggcaggaatactctggtgattgacacaccgcgg
gtgaggaagcaaactcggcactacagctctataaaagaggatgagatgatggagtactca
gagctggagagcgactctgaggagaaacccattcagaaagctcgccggccacaggaccgg
gctcaggggtaccctcgcagtgagtgcttcagggtggagaagaacctgctggtatacggc
tggggcaggtggaaggacatcctttcacatgggcggtttaagcgtcctctgcacgagcga
gatgttgagctgatctgcagatcactgctggcctactgccttctccactaccgaggagac
gagaacatcaagagctttatctgggacctcatcactcctactgaggacggacagagcaaa
acactaactaaccactcagggctgtctgctcctgtaccacgaggccgtaaagggaagaag
gggaagttagctgtgactcagatgaacatgccccaggcggattggttggctgagtgtaat
ccagatgtgttgctgcaggaggacagctacaagcgccacctcaaacaccactgcaacaaa
gtgttactgcgggtgcggatgctctactatctgagacaggaagtgatcggggacctggca
gaccgcatcctggaaggagccgatttcagtgagctggatatatggatcccacacccgctt
catgctgaagtccccactgattggtgggatgtggaggctgataaatcgctcctcattggt
gtatttaaacatggttatgagaagtataactcgatgcgagccgacccggcgctgtgtttt
ttggagcgagtgggaatgccggatgccaaagccatcgccgctgagcagaggggagcggac
gtggtggcagatggtgaggatgaagaccctgagtataaaccaatgcgtatgccattcaaa
gatgatctggatgatttcaccaactctcctctggatgaaaaagaggaggtgatggaggta
gaaagtgttgaagcccccaaggcgagcgagaatggaggtaaaggagggaatctgtactgg
cctgcagcttcagctctcaccgcacgcctgcgtcgcctcattaccgcgtaccaacgctgc
cacaagaggcaggacatgctgattaaaccagacggacgcagacgcagacgtcaccgtgac
gaccacctcctctccatggcagtcgaaggtggggctttcagtttggagcccagtagggtg
gctgctacggcgtatctgactgaaggagcttcgtttgttaaaacctccccgttcctgcac
gagagcgccgccctgttggcagatggagctgctttctttaaagagagacgtcagagatgg
acgagacgtgaggaggctgatttttaccgtgtggtttctaccttcgggattgtttatgat
gtccagaggcagcagtttgactggactcagtttcgagtgtttgctcgtcttgataagaag
actgatgagagtctggagaagtattactacgccttcgtggccatgtgcaagcgggtgtgt
cgaatgcaggtcaaagacccagcagagggcctggctgacccgacactgatcattgacccg
atcacagaggagcgagcctcccggaccctgtaccgtatcgagttattgcggcggatcagg
gagcaggttttgccccaccccgagctggaggagagactccgcctgtgtcagcccagtcct
gatctcccggcctggtgggaggcaggaaaacacgaccgggaccttctccatggagccgcc
aagcacggagtgagccgtacggactaccacatccagaacgaccctgatctcagcttcctg
caggcacagcgcaagttcctccagagccgaggagcagagacgagtctgacctcgaaccca
gtcaccacagtggacctgattaaagacgaggagcagaaggatgaactcaaatacgagaat
gtagagaaagtggacctcaaggaactgaaagaggagaaaactgaggctgcctcactcaaa
caggaagtaaagactgaagaggaagagaagaatcagaaagaggagaagactgaggaggaa
aatggtgcagaagtgaagagtgaagatcacggtgttcctcaaatggctgacgaaaaggtg
gtcatagagtctgaggacacgcccgcacttcctgttaacaaagatgtaaacaaagaggag
ccagagaacccaacatgttcagagcccaacactgagaaaaattcagaggaggaagaggag
gaagagaagatggatgaagatgacaaatcagagaaatcttcccaggctgaagctggtgca
tcctcagacaggaagaactttgacgaggagagtaacgcctctatgagcacagcacgagac
gagacacgggattactttggcatggacgatgtcgaaccaacagtgtctaacgcgtttggg
gaacgatctgtgttttccttctggccaaaggaccgggtgatgatcaataggatggacaac
atctgcgaggctgtcatcaagggcaaatggccgtccaataggaagcagttctttgacttg
cctggcctgttgcctggatttggtgctatggcaacagacagccctctgcccaggaggagc
atgggagatctgtccatgataaatcagagcagctacagcgggagtgatgacatcaccatg
tcaccgcaagtcaataaggacgaagctctgagtctgtctgttcctcgtcagcggaggcgc
aggcggcggaaagttgagatagaggctgagagagctgcgaagaggcgtaatttgatggat
atggtggcgcagctccgtgagtctcactctgcagacggtcagactcgagctatggatctc
acgaaagctctacacggcctggctccttcctcctcatcctcctcctcttcagtgttcccc
ggtgccggggcttcccccatggaactgctgcatgcggccggagcctctagaactaatgga
gccatgctggaggctgaaattcccacacggcggaggagaggacgcaggaaaaatgtggag
ggtatggagctgctcttcatgggaaataagagttcacagctcaacacggaagaatcaaac
ggggccaaaggttttgctgaaggggcacatgtgcctacacgagcaacgcgacacattcca
gctcctgcacaaaaagaggagagcgagcatcttaaaggagaggatggagcgagcactaaa
gacctacaggagtggcttcgacaacatcccacctacaccatggacgtgcctggattcata
ccaaagagtgaggagcttctcctctcacagctgggaaaacccaagcagaaaagacaccgg
tgtcgaaaccccaacaagatagacatcaacacactgacaggggaggagagggttcctgtg
gtcaacaagaggaacggacgcaagatggggggcgctatggctcctccgatgaaggatctg
ccacagtggctggctgagaatccagagttcgccattgctccggactggacagacatcgtc
aaacaatctggtttcctgcccgaggccatgtttgatcgtctcctcactggtccagtggtc
agagaagagggagtgaggcgtcgaggacggagaccaaagtctgaaattgctaaagcagca
gcagctcaggcttctctgtctgcagcttcttcagcctctacctcgggcatgaaccccttc
ctgctgaacggcctgtttgggggaatggacctcggcagcttacagaacctgcagaactta
cagaacctgcagctccttatgggcttgtctccttctcttggtgcaggagctgcagataac
aagaacgccaccaccatgctgcctctcatgctgcctgctatgggtgccctgcccaatgtc
ttcagcctcggggggctttttgggggcaacatggccaccgctgctgctgctaacttaaat
acaaatgctacggccacttcttctgagaccgaggagacaaacaaagacggagaacccaag
gaagactgtgaggagaagaagggggaagtggagaaacctgcagaaactgattcgaacacc
acttcagctgctgcagcgaccaacctttctgcgaatcctctggcgtttaacccgttcctg
ctctccaccatggcaccaggactcttctacccctccatgttcctgccccctggcttaggt
ggtttggggctgactggcttttctccagcggctcttgctgagctgcagaacgcgatgagt
ggtgctttaggagccacaggagaggagagggagaaggaggaggacaaggagactgggcag
aaccctgatgcagtaaaacccagcagcactgtggaaaacagcgactctgaggaaggagag
aacaaaaccgaggatctgagcggaatggccgaggaactggactccatagaggcaggagag
gaagaggatgaggacgaggacgacgatgaggaagttggagatgatgaggaggacaagagt
gactga
DBGET
integrated database retrieval system
