Silurus meridionalis (southern catfish): 124394376
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Entry
124394376 CDS
T08004
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124394376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124394376
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124394376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
124394376
NCBI-ProteinID:
XP_046718481
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Position
12:complement(12929625..13159217)
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AA seq
407 aa
AA seq
DB search
MEGDGSQATSGSPTDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFSDAASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPMAAAAVAAARGSGRGAGGRGGYAEYLHSTGPGFPDYSFYSTTSDQRGPP
FSFADYGSLGPQAAQLLQSEHATSACNSPLQHLPSPDQYKSPGTNPPRPGTFPGASSPGP
VADLYGPTSQDSGVGNYISAASPQPGSGFGHSIAGPLIATAFTNGYH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagccaagccacgtccgggagtccgaccgattcgcaacacgaccca
ggtaaaatgtttatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaatttggagaaatccgagaatgtatggtgatgagggatcccacgaccaagcgc
tccaggggatttgggtttgttacgttctccgatgcggccagtgtagataaagttttaggt
caacctcaccacgaattagactcaaagacgattgaccctaaagttgccttcccgagacgt
gctcaacccaagatggtcacaagaacaaagaaaatatttgtaggcggattatcagctaac
acagtagtcgaagatgtgaagcagtatttcgaacagtttggcaaggtagaggacgccatg
cttatgtttgataaaactacaaatagacatagaggatttggctttgtaactttcgagaat
gaggatgtggtggagaaagtctgtgagattcattttcatgaaatcaataataaaatggta
gaatgtaagaaagctcaacccaaggaggtgatgtttccccctgggacacgagggcgagcc
aggggtctaccctacaccatggatgccttcatgctaggaatgggaatgctgagttaccca
aacattgtagcaacgtatggccgtggatacactggcttcgccccgagctacagctaccaa
ttccctggctttcccgcggcggcgtacggtccgatggcagcggcggcagtggcagcagca
cgtggttcaggtaggggggccggtggaagaggcggctacgcagaatatctgcacagcaca
gggccaggcttccccgattacagtttctattccacgacaagtgaccaacgggggcccccc
ttctcctttgcggactatggctccctaggcccgcaggcggctcagctgcttcaaagcgag
catgccacctcggcctgcaactcccccctgcagcacctgcccagcccggatcagtataag
agcccaggcaccaaccctccacggcctggaacttttcctggagcgagcagtccaggaccc
gtagctgacctgtatggccccaccagccaggactctggcgtgggcaattacataagtgct
gctagccctcaacctggctccggctttggccacagtattgctggtcctttgattgcgaca
gcttttacaaatggataccattga
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