Silurus meridionalis (southern catfish): 124394407
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Entry
124394407 CDS
T08004
Symbol
pld1a
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00564
Glycerophospholipid metabolism
smeo00565
Ether lipid metabolism
smeo01100
Metabolic pathways
smeo04144
Endocytosis
smeo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
124394407 (pld1a)
00565 Ether lipid metabolism
124394407 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124394407 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124394407 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124394407 (pld1a)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
124394407 (pld1a)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
124394407 (pld1a)
Endosome - Golgi transport
Others
Others
124394407 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
PH_11
DUF3785
Motif
Other DBs
NCBI-GeneID:
124394407
NCBI-ProteinID:
XP_046718539
LinkDB
All DBs
Position
12:25751295..25791339
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AA seq
1006 aa
AA seq
DB search
MSDVVESLDPQELCFDEEDVEDADFDPDRCYIPFSCIYKTVGFKESGAQVFLSTELITAR
VLEVERFTRAMDRFNPSGKRSASKAMPAVFRIELKHGNFTWVVKRKEKHFMELHRELLRY
KTFIMIPLPSRSHTVRRKSVNKSEVRQMPVLPRGGREEITKDEQVSSRRKQLEDYLNKLL
RMATYRRYHATMEFIDVSQMSFIHDLGPKGLEGMVYKRSGGHRIPSMNCCGHSQICYRWS
KRWLVMKDSFLMYLKPDTGAVSFVLLVDKEFSVKMDFKHTETKHGVRIDNLSRSLVLKCS
SYRHARWWGQSIEEFVQKHGRQFFTTHRFNSFAKEQEHIPAKWYVNGKTYMEDVADALEA
AKEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVHIFVMLYKEVELALGINS
EYSKRTLMHLHPNIKVLRHPDHVSSSVYLWAHHEKLVVIDQSVAFVGGIDLAYGRWDDCE
HRLTDMGSVTRSTAQDQVDSLGLSSVNGSRSLELAELPKLKGVGRTRKSRFSLYRHLHKH
GLTHTDSVSSMDSQERGSMHNLHTGVGELMGNTRFWHGKDYCNFVYKDWVQLEKPFDDFI
DRYTTPRMPWHDIASVVHGKAARDVARHFIQRWNFTKIVKPKYRSLSYPFXLPKSHSTAN
ELPYQVPNCVTTRVQVLRSAADWSAGIKYHEESIHNAYIQVIAKSKHFIYIENQFFISCA
DNKQVYNKIGDAIIERIIRAHKENKKFRVYVVTPLLPGFEGDISTGGGSALQAVMHFNYR
TMNRGEYSIISQLKKEMNDQWMNYISFGGLRTHSELEGRLVTELIYVHSKMLIADDSTVI
IGSANINDRSMLGKRDSEVAVIVEDTEKVTSVMDGQKYQAGKFALQLRLECFKMILGAFT
DPSIDVSDPISDRFYKEVWMTTASRNATIYEKVFRCLPSSFVRNLQELVSFQTKAGLDKE
DPVKAQEMLKKIRGFLVQFPLEFLSEQNLMPSVGTKESMVPTEIWT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtggtggagagtttagatcctcaggagctctgctttgacgaagaggatgtc
gaggatgcagacttcgatcccgaccggtgctatatcccgttttcctgcatctataagacc
gtgggctttaaagaaagtggagctcaagtttttctttccactgaactgattacagcccga
gttctggaagtggagcgattcaccagggccatggaccgatttaatccatccggcaaaagg
agtgcatccaaggccatgccggctgtgttccgtatcgagttgaaacacggaaacttcacc
tgggttgtgaagcgaaaagagaaacacttcatggagttacacagggagttactacgctac
aaaaccttcattatgattcctttaccctcacgcagtcacacagttcgcaggaagagtgtg
aataagagtgaggtgcggcagatgcccgtattacctcgcggagggagagaggaaattacc
aaggatgagcaggtgtccagcagacgaaaacagttggaggattacctgaacaaactgctg
cggatggccacctaccgcagataccatgccacaatggagttcattgatgtgagtcagatg
tccttcattcatgacttgggaccaaaaggattagaagggatggtgtacaaaaggtcagga
ggtcaccgcatccccagcatgaactgctgcggacacagtcagatctgttaccgctggtcc
aagagatggctagtgatgaaggactcgttccttatgtacctgaaacccgacaccggcgcc
gtctccttcgttctcctggtggacaaagagttcagcgtcaagatggactttaaacacact
gagaccaaacatggagtgaggatcgacaacctgtccaggtctctggtgttaaagtgtagc
agttacagacacgcccgttggtggggacagtccattgaggagtttgtacagaaacacgga
cggcagtttttcacgacgcaccgcttcaactcttttgccaaagaacaggaacacatcccc
gccaagtggtatgtaaatggtaagacctacatggaggatgtagctgatgctctggaagca
gcaaaagaggagatcttcattaccgactggtggctgagtccagagattttcctgaagagg
ccggtggtggaggggaaccgctggagacttgattgcatcttgaagcgcaaagcgcaacaa
ggtgtacatatctttgtgatgctctataaggaagttgaactcgctctcggcatcaacagt
gaatacagcaagagaacgctgatgcaccttcaccccaatatcaaggtattgaggcatcca
gaccatgtctcctcttctgtctatctttgggctcatcatgagaaactcgttgtgatcgac
caatcagtggccttcgtcgggggaatcgatttagcgtacggtcgctgggacgactgtgaa
caccgactcactgacatggggagtgtgactcgctccacagctcaggatcaggtggacagt
ttgggactttcctccgttaatgggtccagatctctggaattagctgaacttcccaaacta
aagggtgtcggccgcacgaggaaatcccgcttcagcctgtacagacaccttcacaaacac
ggcctgacacacacagacagcgtgagcagcatggacagccaggagagaggctccatgcac
aatctccacacaggtgtaggggagctgatgggaaacactcgtttctggcacggtaaagat
tactgcaactttgtctacaaagactgggttcagcttgagaaacccttcgatgattttatt
gatcgctacacgactcccagaatgccctggcacgacatcgcctcggtggttcacgggaaa
gcagcgagagacgtagcacgacattttatacagcgctggaactttaccaagatagtaaaa
ccgaagtaccgctctctctcctacccttttnnactacccaaatcccacagcactgctaac
gagctgccgtaccaagtgcccaactgcgtcaccaccagagtgcaggtgttgaggtcagca
gctgattggtcagcagggattaaataccacgaggagtcaatacacaacgcctacatccag
gttattgccaagagcaaacacttcatctatatcgagaatcagttcttcatcagctgcgcc
gataacaaacaggtttacaacaagattggagacgccatcatcgagaggatcatcagagct
cacaaagagaataagaagttccgtgtgtatgtggtcactcctctgctaccagggtttgag
ggtgatatctccaccggagggggcagtgcactgcaggctgtcatgcactttaactacagg
accatgaacagaggagaatactccatcatctctcagctgaagaaagagatgaatgatcag
tggatgaactacatctcgttcgggggtttgaggacacactcggagttggagggacgtctc
gtcaccgagctcatttatgttcacagcaagatgctgattgcagacgacagcaccgtcatc
atcggttcggcgaacattaatgaccggagcatgttggggaagagggacagtgaggtggcc
gtgattgtggaggacacggagaaggtcacatctgtaatggatggacagaagtaccaggcg
ggaaaattcgctcttcagctgcgacttgagtgtttcaagatgatcctcggagccttcact
gatccctccatcgacgtgagcgatccgatcagtgatcgcttctacaaagaggtgtggatg
accacagccagcaggaacgccaccatctacgagaaggtgtttcgttgtcttccctccagt
tttgtgaggaacctccaggagcttgtgagcttccaaaccaaggctggtttggataaagaa
gacccagtgaaagctcaggagatgctgaagaagatccgaggtttcctggttcagtttcct
cttgagtttctgagtgaacaaaacctcatgccttctgtcggcaccaaagaatccatggta
cccactgagatttggacctga
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