Silurus meridionalis (southern catfish): 124394416
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Entry
124394416 CDS
T08004
Symbol
glra3
Name
(RefSeq) glycine receptor subunit alpha-3 isoform X1
KO
K05195
glycine receptor alpha-3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124394416 (glra3)
04082 Neuroactive ligand signaling
124394416 (glra3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124394416 (glra3)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glycine
124394416 (glra3)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124394416
NCBI-ProteinID:
XP_046718553
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Position
2:3869264..3948344
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AA seq
448 aa
AA seq
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MTRKRLRCVAVRGFLAWEVALLVSLVATKDPESPRGRAVPMSPSDFLDKLMGRTSGYDAR
IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDP
SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM
DVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILKDKSDLRYCTKHYNTGKF
TCIEVRFYLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS
SGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRRRKKLRKE
EEVRESRHSYAPNTGKDASIPKSTNNTGSNSLQAQTSANVPNKSPEEMRKIFIDRAKKID
TISRAGFPLAFLFFNIFYWVLYKILRKP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaaaaggttgcggtgtgtagctgtgcggggattcctggcgtgggaagtggcg
cttttagtgagtctggtggccacaaaagaccctgaaagtcctcggggtagagccgtcccc
atgtctccctcagactttttggacaagctcatgggaaggacctcgggctacgatgccaga
attagacccaacttcaaaggtccacctgtgaatgtgacctgtaacatattcatcaacagt
tttggctccatcgctgagacgactatggattacagagtgaacatctttctgcgacagcag
tggaacgatccacgcctggcctacagcgagtacccagacgactctctggacctcgacccc
tccatgttagactccatctggaagccggatttgttcttcgccaatgaaaaaggtgcccat
tttcacgagatcactacagacaacaagctgctgaggatattcaagaatggcaatgtcctt
tattctataagactcaccctgacgctctcgtgtccaatggaccttaagaatttccccatg
gacgtacagacgtgcatcatgcagctggagagcttcggctacacaatgaatgatctgatt
ttcgagtggcaggaaaacggcccagtgcaagtggctgaaggactcacgcttcctcagttc
atcctgaaggacaagtcggatctcagatactgcaccaagcattacaatacaggaaagttc
acatgcatcgaggtgcgtttctacctggagagacagatgggttattacctgatccagatg
tacattcctagtctgctcatcgtcatcctttcctgggtgtccttttggatcaacatggat
gctgctcctgctcgcgtggctctgggcatcaccacagtgctcaccatgaccacgcagagt
tctggatccagaacctctttgcctaaggtctcctacgttaaggccatagatatttggatg
gccgtttgtttgctgttcgtgttctcagctctgctggagtatgcagcggtgaacttcgtc
tcaagacagcacaaggagctgctgcggttccggaggaggagaaagaagttgagaaaggag
gaggaggtgcgtgaaagccgtcacagctacgcccctaacacagggaaagacgcctccata
cccaagtcaaccaataacacgggttctaactcgctccaggcccagacgagcgctaacgtt
cctaacaagagccccgaggagatgaggaagatcttcatcgaccgtgccaagaagatcgac
actatctcacgtgctggctttccactggccttcctcttcttcaatatcttctactgggtt
ctgtacaaaatcctacgcaagccctaa
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