Silurus meridionalis (southern catfish): 124394427
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Entry
124394427 CDS
T08004
Symbol
si:dkey-24p1.1
Name
(RefSeq) hemicentin-1 isoform X1
KO
K06467
CD22 antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124394427 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124394427 (si:dkey-24p1.1)
04090 CD molecules [BR:
smeo04090
]
124394427 (si:dkey-24p1.1)
04091 Lectins [BR:
smeo04091
]
124394427 (si:dkey-24p1.1)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
SIGLEC family
124394427 (si:dkey-24p1.1)
CD molecules [BR:
smeo04090
]
Proteins
124394427 (si:dkey-24p1.1)
Lectins [BR:
smeo04091
]
I-type lectins (Siglecs)
124394427 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
Ig_CD22
V-set
Ig_5
Ig_4
Ig_C17orf99
C2-set_2
C2-set
CBF
Motif
Other DBs
NCBI-GeneID:
124394427
NCBI-ProteinID:
XP_046718569
LinkDB
All DBs
Position
12:17188947..17208077
Genome browser
AA seq
961 aa
AA seq
DB search
MECKESKFNGTVVFSNTENRAQAPEYFDRVEFLHDNSSYGNAKCSLKIKHLRKNDSGDYA
FRFIKKTYKFISEEFNLKVTDNKCKVHIKPPNLNMSLKDGDNLILQCATSVDCKFFPEWQ
SSVKVLSMRNIEENEKLSELNLTVSWRDDGKTLTCRSSGSFNDNCLEKNYTLSVEYAPQE
TVVIQSSDLNNIKEKENVTVSCTSKAKPEAEFTWFKHDSSFSQPGENLTLYNMKPEDKGI
FYCQAKNIHGDNKSPNIPFNIIYAPKGVTIKSESIILKERSRLTLTCSVENSNPAVEEEA
YRWYKNNKEIEAQTKKIFTVPWVKRPDAGHYQCQARNSAGETNSTHPIQIYVKFLPQNTK
ISGMTETKLGFKLKLQCVTEADPDPINYYWYFKPEHDKFFHTISNQHQEYLEIEKVAVTN
TGSYKCSAENSLGTGTNSTEFSVLVLYPPKKPNLTMKQVVNETESYSITCTVESSPQASL
TLSISSLSNPKTNRILHMTFQSNFLTFSATAKVSDAGEYTCIAKNTQGENASENRLIVWY
APKNVTIEAHPGKELKEGSNLTLTCTADCVPRVNAYTWEKSNRTHSVRVGHEQTLRLHFL
KPSDSDHYVCISKNDIGMLKSSALYIRVNYRPRITIIHNMTSMGLLEDAVPVHLSCSAQC
DPPATFFAWYMLEKNTTVLTNHQNYTVQPHNPGTYYCIARNGIGESSSQTVKIYLNHFFI
KRLVQIIISLLVILILIGALFLLLRIIKKKRHSGKNESPQQLFFFSKAPFWPSSNFCSSG
SRNNTRETLVIEESDELSGFRDNHSSDIVHSHPPPNRKNPNSNIHTVYDAIHLPPTITEC
HYTAEDLPIATLNYATLQFADSNIPNKSVPSSDSCGPVYAKVLKNGQMAKEQGKGHSDYE
NVSGVYKTKQPFPNWDSDTSESEEEVDYTKVTFTVTTHNNPKMDPLSIEEEDQTDYSEVK
I
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtaaagaaagtaaatttaatggaacagttgtatttagtaatacagaaaaccga
gcacaggcacctgagtactttgacagagtggaatttttacatgataacagctcttacggc
aatgccaaatgctcattaaaaattaaacatcttagaaagaacgacagtggagactatgca
tttaggttcataaaaaaaacttacaaatttataagtgaggaatttaatctcaaagtaaca
gacaataagtgcaaagtccacattaagccaccaaatttgaacatgtcactcaaagacgga
gacaatttgattcttcagtgtgcaacgtcagtggactgtaagttttttcctgaatggcag
tcctcagtcaaggttctcagcatgaggaatatagaggagaatgaaaaactcagtgagctg
aatttgactgtgagctggagagatgatggaaagactctgacgtgtcggtcttctggaagc
ttcaatgacaactgcttggaaaagaattatacactgagtgtggaatatgcaccccaagaa
acagtagtgattcagagctcagacctgaacaacataaaagaaaaagaaaacgtgacagtt
tcctgcaccagcaaggccaaacctgaggctgaattcacatggtttaaacatgatagctcc
ttttctcagcctggagagaatcttactttatataatatgaaacccgaagataaaggcata
ttctactgtcaggctaaaaacattcatggagataacaaatcacctaatataccatttaac
attatttacgctccaaaaggtgtcactatcaaatctgaatccattatactcaaagagcga
agccgtcttacactcacatgctcggtggaaaatagcaatccagcagttgaagaagaggcc
tacagatggtacaaaaacaataaagagattgaagcgcagacaaagaaaatattcactgtt
ccatgggtaaaacgacctgatgcaggacattatcagtgtcaggccagaaattctgcaggg
gagaccaactctacacaccctatacaaatttatgttaagtttcttccacaaaacacaaaa
attagtggcatgacagaaacaaagctgggttttaaactaaagcttcaatgtgtcactgag
gctgatcctgatccaatcaattattactggtattttaaaccagaacatgacaagttcttt
cacaccatttcaaaccagcatcaggagtaccttgagattgagaaagtggctgtcactaat
actggctcatataagtgcagtgcggagaatagtctcggtacaggaacaaactcaactgaa
ttcagtgttcttgtgctctaccccccaaaaaaaccaaatctgaccatgaaacaagttgta
aatgaaactgaatcttattccatcacatgtacagtagaaagctcaccccaggcatcactc
acgctaagcatatcttctctgtcaaaccccaaaacaaacaggatattacatatgactttt
cagtccaactttctcactttttctgccactgcaaaagtgtcagatgcgggtgaatacacc
tgtatagcaaaaaacacacagggtgaaaacgcctcagaaaatcgtctgatcgtttggtat
gcccctaaaaatgttactatagaagcacatcctggtaaagagctaaaagagggctctaac
ttgacactcacttgtacagctgattgtgtacccagggtgaatgcttacacatgggagaaa
tctaataggacccactcagtgagagtgggacatgagcagacattgagacttcatttcctg
aaaccctctgactctgaccattatgtctgtatctccaaaaatgacattggcatgttaaag
tcttcagcactatatatcagagttaactatcgtccacggataacgattatccataatatg
acatcaatgggtctattggaagatgcggttcctgtccacctgagttgcagtgctcagtgt
gatccaccagccactttctttgcatggtacatgctagagaaaaacaccaccgtcttgaca
aatcatcagaactacacagttcaaccacataatcctggaacatactactgcattgcaaga
aatggcataggggagtcaagttctcaaaccgtcaaaatatatcttaatcattttttcatt
aaacggctggttcagatcatcatttccttactggttattctcatactgattggtgcctta
tttctcctattgagaatcatcaaaaaaaaaagacattcagggaaaaatgagtcacctcaa
cagttatttttcttctcaaaggctccattttggccttcatcaaacttttgctcatcgggc
tcacgtaacaacactcgggagacccttgtgatagaggaatctgatgagctatctggcttt
agagacaaccattcatccgacattgttcactcacatcctccacccaacaggaaaaaccca
aattctaacattcacacagtgtatgatgctattcatttgcccccaaccataacggaatgt
cattacacagcggaggatttacccatagccactttaaactatgctacgctgcagtttgca
gacagcaacattccaaataaaagtgtaccgagcagtgacagttgtggcccagtttatgct
aaggttttgaaaaatggacaaatggcaaaggaacaaggaaaaggccatagtgattatgaa
aatgtgtctggtgtttacaaaacaaagcagccatttccaaactgggactcagacaccagt
gagtcagaagaagaggtggattacactaaagtgacctttaccgtaacaacacataacaat
ccaaagatggatccattaagtatagaggaagaagaccaaacagactactctgaagtcaaa
atctag
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