Silurus meridionalis (southern catfish): 124394446
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Entry
124394446 CDS
T08004
Symbol
arhgap35a
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 35
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124394446 (arhgap35a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124394446 (arhgap35a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124394446 (arhgap35a)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124394446 (arhgap35a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
Cdh1_DBD_1
FF
NOG1
Motif
Other DBs
NCBI-GeneID:
124394446
NCBI-ProteinID:
XP_046718618
LinkDB
All DBs
Position
12:16188420..16253729
Genome browser
AA seq
1540 aa
AA seq
DB search
MMAKKQDARAPTYNLVVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLSTS
DFGGRVVNNDHFLFWGEASRTLEEGPECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRAA
SNKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLLVDGFLLCVDVSRGMNRNFDDQIKFV
TNLYNHLAKTKKPVVLVLTKCDEGVERYIKDSHTFAVNKKNLQVVETSARSNVNVDLAFL
TLVQVIDKSRGKPKIIPYFEALKQQSQQIASAKDRYEWLVSSIVKNHNETWPNINCRMQT
CPEYKDYVFLEGTSKAKKLFQQHVHRLKQDHIERRRRVYLSTLPQALCTLVPDLEEIDHL
SWSGVQKVLETKRGFSQWFVILDDTPWETTPHIDNMNDERIPQDLLETPAAEVFYESHLV
HLRNERKRAEMRREFKEKLVASPFVTPGKPWEEARSFIMNEEFYQWLEESEYLDIYNKHQ
KEIIDQAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALKKLQAERD
ALVLKHIHFVYHPTKETCPNNPYCVDSKIEQILATRFPTRYAFDGTLKSQYGEGKVDRIN
LVILGKDGLARELANEVRAMCTSDDRYTLDGRVYELALRPIEGNVRLPVNSFHTPTFTPH
GCLCLYNSKESLSYIVESIEKLRESTIGRRDNLYSLAQLPMSLLLVTKRGVGSIGDIGGE
TAQSLIIQGQQVAGKLQCTYLDPASPGAGYARNLNEKQVNQVLKSLVDLQKPTRSLVSSS
PPLQTPRSRFRDSHTQQALDADLHVVMCIMCGDTYDVDQLLSPFLHSQYCRPSANLSSGT
SVLLDLTIGSQRQTVDLAVLSYHSTFSLRKSRLVHGYIAVYSAKRKASMETLCAFLCEVQ
DIIPVQLLAVGESQTELTESEVARDQLVEGEDLAREIEGRFSSVVCGPGGVVGGLHRIDL
FQPFLKDVVEKKTIIEATHTYDNVAEACSTNESVHSPRCESPSIPLLDSEDDVDPSPPHL
VYREDSTLTHGFKFADPDSSDTFSVISEISTFESKLNNKFAPQVRPKPAVTFGKGSLSSY
MDHGGTRRSVPSVTWPPSSDGGYDPSDYSEPVDAVPKPRPTEEENIYSVPHDSTQGKIIT
IRNANKSHSNGGGNGSDSEADSSSLERRRKLSSIGVKPRLYRDRSKRLGKFSNFRTSFIG
SDDELGGPIKTKDDEIGIQKGDNSLNEEGEDPKRNKILRSLRRTGKKTRPKPRQSFSKPP
ESNYFGVPLANVVTPDRPIPLFIEKCIRYIEATGLSTEGIYRVSGNKAEMESMQRQFDHD
QTLDLVEKDFSVNTVAGAMKSFFSELPDPLVPYSMQLELVEAFKINDREQRFLAMKDVMR
RFPXENYDVFKYVISHLNKVSHNSRVNLMTSDNLSICFWPTLMRPDFTTMDALTATRTYQ
TIIETFIYQCAYFFYNQPLVDNPSSLSGLPGSPTATLSSTSSMSGSAYPSYYTSAQHVAT
PFIPPQQSPPHSPPPTPQSPIQSLLPSLHPHHAPTEQHML
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaaaaacaagatgcccgggcaccaacctacaacctggttgtagtaggtttg
tccggtactgaaaaagagaaagggcagtgtggggtagggaagtcctgcctttgtaaccgc
tttgtacgccccagcgctgatgatttttatttggatcatacctctgttctgagcactagt
gactttggtggtcgagtagtaaacaatgaccactttttgttctggggtgaggcatcacga
acattggaggagggaccagaatgcagaatgcacgtggtggagcagactgagtttattgat
gaccaaacgtttcagccacatcgaagcactgcactgcagccttacattaagcgggcagct
tccaacaaactggcctcagctgaaaagcttatgtatttctgtactgatcagctcggtctt
gagcaagattttgagcaaaaacaaatgcctgaaggaaagcttcttgtggatgggttccta
ctttgtgttgatgtaagcaggggaatgaaccgtaattttgatgaccagataaagtttgtt
accaacttgtacaaccatttagcaaagactaagaaaccagttgtacttgtattgaccaag
tgtgatgagggagttgaacgatatataaaggactctcacacctttgctgtaaacaagaaa
aatctgcaggtagttgagacgtctgcacgctctaatgtcaatgttgaccttgccttcctc
accctagtgcaggtgatagataagagtcgaggaaaaccgaagatcataccctactttgag
gctctaaagcagcagagtcagcaaatagcatctgctaaagaccgctacgagtggcttgtc
agttccatcgtgaagaaccacaatgaaacatggcccaacatcaactgcagaatgcagaca
tgccctgaatacaaagattatgtcttccttgagggtacttccaaagccaagaaattgttt
caacaacatgtgcacaggctcaaacaggatcacatagaaagacggcgcagagtttattta
agtacacttccacaggccctgtgtactttggtaccagatttagaggagattgaccactta
agctggtcaggggtacagaaggttctggagacaaagcgtgggttctcacagtggtttgtt
atattagatgacacaccatgggaaactacaccacatatagacaatatgaatgacgagcgt
ataccccaggatcttttggaaacaccagctgcagaagttttctatgaaagtcatttagtg
catctgagaaatgagagaaaacgagcagaaatgcgtcgagaattcaaagagaaactggtt
gcgtcaccatttgtcactcctggcaagccttgggaggaggcccgcagctttataatgaat
gaagagttttaccagtggctggaggaatccgagtacctagatatctacaacaagcatcag
aaggagattattgaccaagccaaagaggacttccaagagcttttgctcgagtactctgag
ctgttctatgagcttgaggtggatgctaaacccagtaaagaaaaaatgggtgccattcaa
gaggttcttggagaggaacagagatttaaagctctcaaaaaacttcaagcagagagggat
gctctagtacttaagcatattcattttgtctaccacccaacaaaggaaacttgcccaaat
aatccttactgtgtggacagcaagattgagcaaattttagccactagatttcctactcgg
tatgcatttgatggcactttaaagtcccagtatggtgagggaaaagtagataggatcaat
cttgttatccttggaaaagatggacttgctagagaattggccaatgaggtcagagcaatg
tgcaccagtgatgaccgatatacactggatggaagagtatatgagctggctctgcgtcct
attgaaggcaatgtgcgtttaccagttaactcttttcacacacctacttttaccccacat
ggatgcctctgtctctacaactctaaagaatctttgtcctacatagttgaaagcattgag
aaacttcgggaatcaaccattggtcgaagggataacttatatagcttagcacagctcccc
atgtcactcctgttagtcaccaagaggggcgttggatcaattggggatattgggggagaa
actgcacaaagtttaataattcaagggcaacaggttgctgggaaacttcagtgcacttac
ttggatcctgcttctccaggtgcaggatatgctcgcaatctaaatgaaaagcaggtcaac
caagttctgaaaagccttgtggatttacagaaacccactcgcagtcttgtaagcagctcc
cctccattgcagactccacgttctcgttttagagactctcatactcaacaggctttagat
gctgatttacatgttgttatgtgtattatgtgtggagacacttatgatgtggaccaactt
ttatcaccattcctacattctcaatactgtaggccctctgccaacctatctagtgggaca
tcagtgttgttagaccttactattggtagccaaaggcaaactgttgacctagctgttcta
tcatatcattctaccttttctttacgcaagagccgtttagtacatggatacattgctgta
tactcagctaaacgcaaggcttccatggaaacgctttgtgccttcctttgtgaagtgcaa
gacatcatacctgtgcagctgctggcagttggggagagtcaaacagagctaacagaatct
gaagtagctcgtgatcaactggtcgaaggggaggacttggctcgtgaaattgagggccgt
tttagttctgttgtctgtggaccaggtggggtagtaggtggtttgcatcgaatagatctc
tttcagccttttttaaaggatgtagttgaaaaaaagaccataatagaggccacccataca
tatgacaatgtagcagaggcctgcagtaccaatgaaagtgtccattcacctcgttgtgag
tcaccaagcatccctttgctagactctgaagatgatgttgacccctcaccacctcacctc
gtctacagggaggatagcactttgactcatggatttaagtttgctgatcctgacagtagt
gataccttcagcgttatttccgaaatcagcacctttgaaagcaagcttaacaacaaattt
gcaccacaggtgcgacccaagcctgcagttacatttgggaaaggtagtcttagctcctac
atggaccatggaggaaccagacgctcagtaccttcagtcacatggccgccaagcagtgat
ggtggatatgatccttctgattattctgagccagtagatgctgtacccaagccccgcccc
acagaagaggaaaacatctactcagttccacatgatagcacacagggtaaaatcattacc
attcgcaatgcaaacaagagccattctaatggtgggggcaatggctcagacagtgaggca
gacagcagttcactagagcgcagacgcaagttgtcttctattggagttaagccacgatta
taccgtgatcgctctaaacggctgggcaagttcagtaatttccgcacaagtttcattggc
agtgatgatgagcttggaggtccaatcaaaaccaaagatgatgagataggaatacagaaa
ggggacaattctctgaatgaagagggtgaggaccctaagagaaacaaaatattaaggagt
cttcgcagaactggcaagaaaacaagaccaaaaccacgccagtccttttcaaaaccaccg
gagagtaactactttggtgtgcctttggccaacgtggtcacgcccgaccgtcccatcccg
ctgttcattgagaagtgcatccgatacattgaggcgactggcctgagcactgagggaatc
tacagggtgagtggaaacaaggctgaaatggagagcatgcagaggcaatttgaccacgat
cagaccctggacctggtggaaaaggacttctctgtgaacactgtagctggagccatgaaa
agcttcttctctgagcttccagatcctctggtaccctacagcatgcagttggagcttgtg
gaggcctttaagatcaatgatagagagcaacgattcctcgccatgaaagacgtgatgcgc
aggttccccngagaaaactatgatgtcttcaaatatgtcatcagtcacctgaacaaggtg
agccataacagtcgtgtgaatctgatgacgagtgataatctatccatctgtttctggccc
acactgatgcggcctgactttaccaccatggacgcgctgacagcaacacgcacttaccag
acaatcatcgagaccttcatctaccagtgtgcttacttcttctacaatcagcccctggtc
gacaacccaagcagcctctctgggctcccaggatcccccactgccaccctgtcttcaact
tcgtccatgtccggctccgcctacccatcctattacacctcggcccagcacgtagccaca
cccttcatcccacctcagcagtccccaccccattctcctcccccgactccacagtcacct
atccagagtcttcttccttcactacatccacaccatgcaccaacggaacaacacatgctg
tga
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integrated database retrieval system
