Silurus meridionalis (southern catfish): 124394452
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Entry
124394452 CDS
T08004
Symbol
pdzd3a
Name
(RefSeq) Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform X1
KO
K24059
PDZ domain-containing protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124394452 (pdzd3a)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
124394452 (pdzd3a)
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Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
124394452
NCBI-ProteinID:
XP_046718624
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Position
12:complement(10014198..10023858)
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AA seq
509 aa
AA seq
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MSKPSQSGFSQNNIAETEDATDRQQKFTFNPKEGIDNPALMISDDPEPNLCPRLCLLVRE
QGQGFGFHLRKESGCRGHVVQQVAPWSAAERSGLRDGDRILEVNEDFVDNQEYSKVVLKV
QASGLQLCLLVLNSAEYETAVSEGIDLMALSRVHRGEDCARPRLCHISRERGIGLGLSIF
PIEGKRGKYYVSPVSEGPAERAGVQAGDHLLSINGVVVSKLTHSALMKMFKKSGEYVTIL
VIDSRSEESYIRRRLPILPAFASTHNLPHIPKTLHLTQGPQGYGFLLRQEKLPTGHIVHL
LREVDPCSPAEAAGMEDGDLLLAVNGEQVENSEHEEIVSRIRQSGQQVTLTTISIQGRDY
YKQLGLSPLMFYEEYIPQRERFPTNTLPSNNLPCSRLCTLHREDTGFGFKLAYSQNDYRV
YVGQVQAGHAGDRAGLQEGDVIVEVNGQRVEHGHFEEVVTLIKKGGTSLTLRVMDKDAFE
NLSASGVPIVSDVTLHSTQVPDSTQDNFV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccatctcaatcgggcttctctcagaacaacatcgcagaaacagaagatgca
acagacaggcaacagaagttcacatttaacccaaaagaaggaattgacaatccagcactg
atgatctcagatgacccagagccaaacttatgtccgaggttatgcctgctagtgcgagag
caaggccaaggatttggttttcatctgcggaaagagagtggctgcaggggccatgttgtg
cagcaagttgccccatggagtgcagcagagcgcagcggtttgagagatggagaccgcatt
ctggaggtcaatgaagactttgtggacaaccaagagtattccaaggtggtgctgaaggtg
caagcatctggattgcagctgtgtctgctggtcttgaactctgcggaatacgaaacagct
gtgagtgaaggaatagacctcatggctctgtccagggttcatcgaggtgaagactgtgca
cgtcctcgtttgtgccacatcagcagagagcgtggcattggcctgggactcagcatcttt
cccattgaaggtaagagaggaaagtattatgtaagcccagtgagcgagggtccagcagag
agggcaggagttcaggcaggagatcatcttctctcgatcaatggtgtcgttgtgtcaaaa
ctcacacattctgcacttatgaaaatgtttaaaaagagtggcgaatatgtgactattttg
gtaatagacagcagaagcgaagaaagctatattcgtcgaagactgcccattctccctgct
tttgccagcactcataatctgcctcacataccaaaaactctacaccttacccagggacca
cagggctatgggttccttttacgacaagaaaagctgcctacaggacacattgttcacctg
ctgcgagaggtggacccgtgcagcccagctgaggcagcagggatggaggatggggatctg
ctactggcggtcaatggagagcaggtggagaactctgagcacgaggaaatagtcagcaga
atacggcaaagcggtcagcaggtcacacttactactatctctattcagggcagagattac
tacaaacagctgggtctttcaccacttatgttttatgaagaatacattccacaaagagag
cgcttccctacaaacactctaccgtccaacaacctgccgtgttctcgactgtgtaccctt
cacagagaggacacaggatttggcttcaaactggcttatagccagaatgattatagagtc
tatgttggccaggtgcaagctggacatgctggagacagagcagggctgcaggagggggat
gtgattgtggaagtgaatgggcagagggtggagcacgggcattttgaggaggtggtgaca
ctgatcaagaagggagggacttctctgaccctgcgcgtcatggacaaggatgcgtttgag
aatctcagtgcaagtggcgtaccgatcgtttcagatgtgaccttgcacagcacacaggtt
cctgattcaacacaagacaattttgtataa
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