Silurus meridionalis (southern catfish): 124394506
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Entry
124394506 CDS
T08004
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124394506 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124394506 (cadm1b)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Nectin family
124394506 (cadm1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
C2-set_3
C1-set
FAS_meander
Adhes-Ig_like
Syndecan
DUF2970
Mid2
Motif
Other DBs
NCBI-GeneID:
124394506
NCBI-ProteinID:
XP_046718730
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Position
12:8613826..8805512
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AA seq
418 aa
AA seq
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MASLASGSLSLTLFFTCLVFTAFLPEGATQIITAQGQNLVTANVSVVEGETAIISCRVKN
NDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVTLMDEGRYVCQLYT
DPPQEAYADITVLVPPGNLIIESRENVVSEGNETEITCTAMGSKPASSIFWMKGDQILQG
EETVEETYDRMFTVTSRLRLTVSKEDDGVPVICIADHPAVKDFQTQKYLEVQYKPEVKIV
VEFPDGLTREGENLELSCMAKGKPQPHQINWFKVDDDVPSHAVITGSDLLIENLNKSYNG
TYRCVASNLVGESYDDYILYVYDILTTTPPPTTTIIQDSRADAAAQKIDHAVIGGVVAVV
VFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQTNTDDKKEYYI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttggcgagcggatctctctctctcacactcttcttcacctgtctcgttttt
acagcttttctgcctgaaggagctacccagataataacagcacagggtcagaacctggtg
acggcaaacgtgtcagtggtcgagggtgaaacggccattatcagctgccgagtgaagaac
aacgacgactcggtcatccaactcctcaaccctaacagacagaccatttacttccgtgat
gtcagacctcttaaggacagccgttttcagctggttaacttctcggacaatgagctgcgc
gtctccttgtccaacgtgacactcatggatgagggaagatacgtgtgccagctctacaca
gaccccccgcaggaagcctatgctgacatcactgtcctggttccaccaggcaacctaatc
atcgagtcacgtgagaatgtggtgagcgaaggcaatgagaccgagataacctgcacggcc
atgggcagtaagcccgcctccagcatcttctggatgaaaggagatcagatcctacaaggt
gaggaaacagtggaggagacgtatgacaggatgttcaccgttactagccggctcaggctc
accgtctccaaggaggacgatggagtgcccgtcatctgcatcgctgaccatccagctgtg
aaggacttccaaacccagaaatacctggaagtgcaatacaagccagaggtaaagattgtt
gtggagtttccagatggcctgacaagagaaggggaaaacctcgagctaagctgcatggcg
aagggcaaacctcaacctcatcaaattaactggttcaaagtagatgatgatgttccctcc
cacgccgtgattacaggctccgatctcctcattgagaacctcaacaagtcctacaatgga
acctaccgctgtgtggcatctaacttagtgggagaatcgtacgatgactacatcctctat
gtctatgatattctcaccacaacccccccacccactactaccatcatccaagattcgaga
gcagatgcggcagcacagaaaatagatcacgctgtcatcggcggagtcgtcgctgtagtc
gtattcgccatgctctgtttgctcatcgtcctggggcgctactttgccagacataaagga
acttattttacgcacgaggccaaaggagcagacgatgcagcggatgccgatacagccatc
atcaacgccgagggagggcaaaccaacacggatgacaagaaggaatattatatctaa
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