KEGG   Silurus meridionalis (southern catfish): 124394528
Entry
124394528         CDS       T08004                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124394528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smeo03041]
    124394528
Spliceosome [BR:smeo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    124394528
 Complex B
    124394528
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7 DUF2299
Other DBs
NCBI-GeneID: 124394528
NCBI-ProteinID: XP_046718759
LinkDB
Position
12:26628274..26652091
AA seq 954 aa
MAERAAGGTPRASSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDEKAAAEIYEE
FLAAFEGGEGRVKTFVRGGIANAAKEEAATDDKRGKLYKPKSKILEAKTFLPLETPPQFL
ALDKRSVKKMEKEKKKSNLELFKEELKQIQEERDERHRMKGRVSRFEPLPNTEGRRSFLD
ESAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN
CGFVAFMTRKDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPS
GLPFNAQPKERLKNPNAPMPPPPKNKDEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVV
REGPMFEAMIMNREISNPLYRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTEDFRLFKN
GSFWRPPPLNPYLHGTPQEEENEEDEEEEAIKKGSLKDDERDKLEEILRGLTPRRSDVAE
AMLFCLTHADAAEEIVECITESLSILKTPLSKKIARLYLVSDVLYNSSAKVANASYYRKF
FEIKLCQIFSDLNATFKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPFLIKLQNIFLGL
VSLDPEKEPEVSEHQSTEHSEDLDGAPIVEEELDGAPLEDVDGTPIDGALLDGAMLEDLD
GVPIKGSEEELDGLPLDGRKPGFKMAPSKWEEVDGSALKAQAVTTSKWEVFDLPDESEKS
GERQTPEADVKENVRSFSSEAQFHTQPAKEEHQDSRSAKLSEMSEEKRAKLREIELKVMK
FQDELESGKRPKKSSQSIQEQVELYRDKLLQREKEKEVEKDKEKEKEKKDKDKSDVIHKE
KEKEDSSSNRKEKKRRHSPSPSPSRSSSVRRVRSPSPRSERSDRSYTKDSSRSTYRDSPR
DSSRKSSKRSPSPSATPKRSRRSRSRTPKKSSKKSRSRSRSPHRSHKKSKKSKH
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggcggagcgcgcggcaggcggaacaccgagggctagctctaaggctttattggaaagt
aaactgaaggccttcagcatcggaaaaatggctgtggctaaaagaacactaagtaaaaag
gaacaggacgagctgaagaagaaggaggatgagaaagcagctgcagaaatctatgaggaa
ttcctggctgcgtttgagggtggtgaaggacgagtgaaaacttttgtcagaggaggaatt
gccaacgctgctaaagaagaagctgcgactgatgataaaagaggaaaactctacaaaccc
aaatccaagattttggaagcaaaaacatttttgccgctggagactccaccacaattcctc
gctctagacaaacgcagcgtgaagaaaatggagaaagagaagaaaaagagcaacctggag
ttatttaaagaagagctgaaacagatccaagaggagcgagatgaacgtcacaggatgaaa
ggacgtgtcagtagatttgagcctcttccaaacacagaagggagacgatcctttttagat
gaatctgctccaggctcacatgatgttggtgatcctacaaccacgaatctgtacctgggc
aacataaaccctcagatgaacgaggagatgttatgccaggagtttggacgctacgggcca
ttagcgagtgtgaagatcatgtggcccaggactgatgaagagagagctcgagagagaaac
tgtggatttgtggctttcatgacgaggaaagatgcagaacgagcgcttaaacatttaaac
ggaaaaatgataatgaactttgaaatgaagctgggatggggcaaaggtgtgccaattccc
cctcaccccatctatatccctccatccatgatggagcacacattgcctcctccaccctca
ggtctgcccttcaatgctcagcccaaagagaggctgaagaaccccaacgcccccatgcct
ccccctcccaagaacaaagatgagtttgagaagactctgtcgcaagccatagtcaaagtg
gttatcccaacagaaaggaatctgctctctctaatacaccgcatgatcgagtttgtggtg
cgtgaaggtccaatgtttgaggccatgatcatgaacagagaaattagcaacccgctgtac
aggtttttattcgagaatcagagtccagctcacgtgtattatcgttggaagttgtactcc
attttgcagggagattctccaactaaatggaggacagaggacttcaggttgtttaagaac
ggctcgttctggcggccacctcctctgaacccgtacctacatggcacacctcaggaggag
gagaatgaggaagatgaagaggaagaagccatcaagaaaggatcactgaaagacgatgag
agagataaactagaggagattctgcgaggtctcacccccaggcggagtgatgttgctgag
gccatgctgttttgtctgactcatgctgatgctgcagaggagattgtggagtgtatcact
gagtctctgtccatcctgaaaacaccactttctaaaaagattgcgaggttatatttggtg
tctgatgtgctgtataactcctcagctaaagtcgctaacgcatcctattatcggaaattc
tttgagattaaattgtgtcagatattctcggatctcaacgccacctttaagacgatacag
ggacatttacagtcagagaattttaagcaaagagtgatgtcgtgtttccgagcatgggag
gattgggccgtgtatcctgatcccttcctcatcaaactacagaacattttcttgggactc
gtcagtctcgatccggaaaaggagccagaagtgtctgagcatcagtctactgaacactct
gaggatttggatggtgctcctattgtagaagaagagttggatggagctcctttagaggat
gttgatggtacaccaatcgatggagctctgctagatggtgctatgctggaagacctggat
ggtgttccaataaaaggatcagaggaagaactggatggccttcctttggatggacggaaa
cctggatttaaaatggctccatcgaagtgggaggaagtggacggatctgctctcaaggct
caggctgtaactacatcaaagtgggaagtctttgatttacctgatgagtctgagaaaagt
ggtgagaggcaaacacctgaagctgatgtgaaggagaacgtaaggagtttttcttcagaa
gctcagtttcatacccagcctgctaaagaggaacaccaggactccagatcagccaaactc
tcagagatgagtgaggagaaacgcgctaaactgcgggagatcgagctcaaagtgatgaag
tttcaggatgagttggaatctggaaaacggcctaaaaaatccagccagagcattcaggag
caggtggagctgtacagggacaaactgctgcagagggaaaaagaaaaggaagtggagaaa
gataaagagaaggaaaaagaaaaaaaggacaaagacaaatctgatgtaattcataaagag
aaggaaaaagaggattcatcgtctaacagaaaagaaaagaagcgcagacacagtccgtct
cccagtccgagtcgcagcagcagcgttcgccgtgtccgatctccatcaccgcgctccgag
cgctccgaccgatcttacaccaaggacagctcccgctccacctacagagactcgcccaga
gacagcagtcgaaaatcctccaaacgatccccctccccctctgccacgcccaaacgatct
cgcaggtcaaggtcccgaacacccaaaaaatcctcgaagaaatcccgttctcgttcccgc
tctccgcaccgctctcacaaaaaatctaaaaagagcaaacactga

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