Silurus meridionalis (southern catfish): 124394551
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Entry
124394551 CDS
T08004
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124394551 (trpc4b)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124394551 (trpc4b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
124394551
NCBI-ProteinID:
XP_046718818
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All DBs
Position
12:21113403..21179648
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AA seq
920 aa
AA seq
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MAQLYYGGGGGGGRGDGGGSGVFSSRRDRIRLRVVRAEPELSALEKAYLSAVEKGDYGSV
RRALREAEIYFKINVNCVDPLGRTALLIAIENENMEMVELLLAHEVHVGDALLHAIRKEV
VGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDLTPIILAAHTNNYEIIKMLVQKGVSV
PQPHEVRCNCSECVSSSDVDSLRHSRSRLNIYRALASPSLIALSSEDPFLTAFQLSWELQ
ELSKVENEFKAEYEELSYQCKRFAKDLLDQTRSSRELELILNFRDDLSLLEEESNNELAR
LKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCIFIGLLFPLFSVCYL
VAPKSRIGLFIRKPFIKFICHTSSYLTFLFLLLLASQRIVPTDPRRQGPEPTTVEWMILP
WVLGFIWTEIKQMWDGGLQDYIHDWWNLMDFVMNALYLATISLKIVAYVKYSESKPRDSW
EMWHPTLVAEAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLV
AFANGLNQLYFYYETKGIDNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLISLYVTNVQA
DHKFTEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFE
EGGTLPPPFNIIPSPKSMWYLINWIKIHIFRRRLRSTETFGALGRRAAEKVRLSHQYQGV
LRNLVKRYVAAMIRDAKKEEGLTEENFKELKQDISSFRYEVLEMLKGNRTSLRKPKMVSG
TSASSHPGCLHQFKIKPSTCEASLDHVLEPRRSLLNGSVMSLPETSAREKQKNDNSSDFG
LFQCSTLSHCSNTNIYSVFEEDRKSEIERSDCAKEHECEHSLTQRHIDCGNESKSKEGEE
KEPALSETADKICSLSPTDT
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctctactacggcggcggcggcggcggcgggaggggagacggcggcgggagc
ggcgtgttctcctcgcgccgcgaccgcatccgtttgcgcgtggtgcgcgcggagccggag
ctctcggcgctggagaaggcgtacctgagcgccgtggagaagggcgactatggcagcgtg
aggcgcgcactgcgcgaagccgagatctacttcaagatcaacgtgaactgcgtggacccg
ctcgggcgcaccgcgctgctcatcgccatcgagaacgagaacatggagatggtcgagctc
ctgttggcgcacgaggtgcacgtcggggacgcgctgctccacgccatccgcaaggaggta
gtaggagccgtggagctgctgctcaaccacaaaaagcccagcggagagaaacaggtgcct
ccgatcctgttggacaaacagttctccgaattcaccccagaccttacgcccatcatcctc
gctgcccacacgaacaattacgagattattaagatgctggtgcagaaaggtgtgtcagtg
cctcagccccatgaggtgcgctgcaactgttccgagtgcgtatccagctcggatgtggac
agtctccgccactcacgctcacgccttaacatctacagggccctggcaagcccatcactc
attgcgctgtcgagcgaggacccgttcctgaccgccttccagctcagctgggagctccag
gagctcagcaaggtggagaacgagtttaaggctgagtacgaggagctatcttatcagtgt
aagcgctttgcaaaggatcttctggaccagacacgttcctcacgcgaactggagcttatc
ctcaacttccgtgatgaccttagccttctagaggaggaaagcaacaacgagctggctcgg
cttaaactggccatcaaatacagacagaaagagtttgtagcccagccgaactgtcagcag
ctcttggcttcacgctggtatgatgagttcccaggctggaggaggcgccactgggcaggc
aagctcatcacgtgtatcttcatcggcttactcttcccactcttctctgtctgctacctt
gtggctcccaaaagccgcatcggcctcttcatccgcaagccctttatcaagttcatctgc
catacatcatcttacctgaccttcctcttcctcctcctgctggcctcgcagcgtatcgtt
cccaccgaccccaggcgtcaaggcccagagcccaccacggtggagtggatgatcctgccc
tgggttttaggtttcatatggacagagattaagcagatgtgggatggtggattacaggat
tacatccacgactggtggaacctcatggactttgttatgaacgccctctacttggcaact
atttcactaaagatagttgcatatgttaagtacagtgagagtaaacccagggacagctgg
gaaatgtggcaccccacgctggtggccgaggctgtgtttgccatcgctaacatcttcagc
tccctgcgcctcatctccctcttcacggccaattctcaccttggtcctctgcaaatctca
ttgggccgaatgcttttagacatcctcaagttccttttcatctactgcctggtgctggtg
gcttttgccaatggcctcaaccaactctacttctactacgagaccaaaggcatcgataac
tgcaagggcatccgctgcgaaaagcagaacaacgctttctcaacgttgtttgaaacgtta
cagtctttattctggtccatatttggtctgatcagtttatacgtgaccaacgttcaagcc
gaccacaaattcaccgagtttgtaggcgccacgatgttcggcacgtataacatcatctcc
ctggtggtgctcctcaatatgctcatcgccatgatgaacaactcgtatcagcacattgca
gatcatgctgacattgagtggaaatttgccaggacgaagttgtggatgagctattttgaa
gagggaggtacactgccaccaccgttcaacatcatccccagtcccaaatccatgtggtac
ctcattaattggattaagattcacattttcagaagaaggttgaggagtacagaaactttt
ggagcattagggagaagagctgccgaaaaagtaagacttagccaccaatatcagggggtt
ttgagaaacctggtaaaaagatatgtagcagctatgatcagagatgccaaaaaagaagaa
ggacttacagaagaaaacttcaaggagctgaagcaggacatctccagtttccgctatgaa
gtactggaaatgctgaagggcaatcggacatctctgcgtaagccaaaaatggtttctgga
acatcagcctcttcacatccgggctgtttacaccagttcaagatcaagccaagtacatgt
gaggcgagcttagaccatgtgctagagcctcggaggagcctcctcaatggctcggtcatg
tccctgcctgaaacgtctgccagagaaaagcagaagaatgacaattccagtgactttggt
ctgttccaatgctctactctaagtcactgttccaacacaaatatttactcagtttttgaa
gaggaccgtaaatcagagattgaacgatctgactgtgcaaaggagcacgaatgtgagcat
tcgctgacccagagacatatagattgcgggaatgagtcgaagtctaaggagggagaggaa
aaagagccagctctatccgagactgcagataagatctgctctctttcaccaacagacaca
taa
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