Silurus meridionalis (southern catfish): 124394574
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Entry
124394574 CDS
T08004
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50-like
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124394574
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124394574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
zf-RING_2
zf-RING_5
Apolipoprotein
RING_XB3-XBAT31
zf-RING_10
Sina_RING
MTUS1_CCDC69_CC1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124394574
NCBI-ProteinID:
XP_046718862
LinkDB
All DBs
Position
12:14345286..14349418
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AA seq
485 aa
AA seq
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MARRCSLESLEEQLLCPVCLEVFSEPLMLQCGHSYCRGCVRSMDMDPVGQLQCPVCRCAV
DGDSPPPNVALARIVEALREISEPGQGPPETCNQHHNPLSLYCEEDQTLICGLCGSIGSH
RAHKVTPISSVYSRMKEDISCLMTDFQTQKRKLEEQICKMAYNKSRITNESDVLKWVVRK
EFGELRHYVELEEASFMQKVENTASSLISSIQTQADQMSQLLAKFQEAEGTLEALSNESH
LDFITKYGSIAPRFRESQQREQRKERTYSSISFNPGFNHSDIKMTVWKRLHRRVLPAPEC
LKFDPLTAHPMLQISEDHTSVECGVIVNRLPNNPERFSYSYCVLASRGFSSGKHYWEVQV
GNKPKWRLGIIKGTACRKSKLPKSPESGVWLIGLKEGRLYEAFNTPRVTLPLMSPPHRLG
VFLNYDRGELTFYNADSPDELGLIYSYQAELQGKVYPLFDVCWHERGANKLPISLPQPLT
EACGD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgctgcagtctggagtcactagaggagcaactgctctgccctgtgtgtctg
gaggtcttctctgagccacttatgctgcagtgtggccactcatactgccgcggttgtgtg
cgctctatggacatggatcctgtggggcagctccagtgtcctgtgtgtcgctgtgccgta
gatggggacagccccccacctaatgtggcactggcacgcattgtggaggctttacgagaa
atcagtgaaccaggtcaaggccctccagagacttgcaaccaacaccataaccctttgagt
ctgtattgtgaggaagatcagacactgatctgtggattgtgtggcagcattggaagccac
agagcacacaaggtcaccccaatcagcagcgtctacagccgtatgaaggaggacatttcc
tgtctgatgactgattttcagacacagaaaaggaagctggaagagcagatttgtaaaatg
gcctacaacaagtctcgtattacaaatgagtcagatgtgctgaagtgggtggtcaggaag
gagtttggggagttgcgacactatgtggagctcgaggaggccagcttcatgcagaaggtg
gagaacactgcttcttctctcatctcctccatccagacccaggctgatcaaatgagccaa
ctgctagccaagttccaggaggctgaaggcacactggaggccctgagcaatgagagccat
ctggacttcataactaaatacggatctattgccccaaggtttagagagagtcaacagaga
gaacagcggaaagagaggacctacagctccatcagctttaacccaggctttaatcacagt
gacatcaaaatgacagtatggaagagattacacaggagagttttaccagctcctgagtgc
ctaaagtttgaccctctcacagctcaccctatgctgcagatcagtgaagatcacaccagt
gtggagtgtggagtcatcgtcaaccgcctgcctaacaatcctgagcgattcagctacagc
tactgtgtgctggccagccgtggcttttcctcaggcaaacactactgggaggttcaggtg
ggaaacaaaccaaaatggaggcttgggataatcaaagggactgcttgccgtaagagtaag
cttcctaaaagccctgaaagtggggtgtggctaattgggctgaaggagggccggttgtat
gaggctttcaacactcctcgtgtcactctgcccctcatgagtccgccacatcgcttgggg
gtttttctgaactatgacagaggagagctgacgttttataatgcggacagtcccgatgag
ctcggattaatttattcctatcaggctgagctgcaggggaaggtctacccactgtttgat
gtctgctggcatgagcgtggtgccaacaaactgccaatctccctgccacagccactcact
gaagcctgtggagattag
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integrated database retrieval system
