Silurus meridionalis (southern catfish): 124394614
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Entry
124394614 CDS
T08004
Name
(RefSeq) claudin-8-like
KO
K06087
claudin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03272
Virion - Hepatitis viruses
smeo04382
Cornified envelope formation
smeo04514
Cell adhesion molecules
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124394614
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124394614
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124394614
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124394614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124394614
04147 Exosome [BR:
smeo04147
]
124394614
04515 Cell adhesion molecules [BR:
smeo04515
]
124394614
Cilium and associated proteins [BR:
smeo03037
]
Other cilia and associated proteins
Stereociliary proteins
124394614
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
124394614
Exosomal proteins of colorectal cancer cells
124394614
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
L1 family
124394614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF4573
Motif
Other DBs
NCBI-GeneID:
124394614
NCBI-ProteinID:
XP_046718929
LinkDB
All DBs
Position
12:complement(2566499..2568666)
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AA seq
285 aa
AA seq
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MAGQPIELAALVLSLLGLIGVAASTGMPMWRVTAFIGENIIVMETRYEGLWMNCFRQANI
RMQCKVYDSLLALTPDLQAARGLMCCSVALAAIGLFVAITGMKCTACIQDNDRAKRMVLI
VAGSLIILACICSIIPVSWTGNVIIRDFYNPLLIDAQRRELGEALYIGWVSSVLLFAGGC
IFACCGGSQEKRADQPRYAYNRDVPYMAYQPQPVAYQPRPAAAYSLASREPSFIQTSTQP
SIAQSYRQQSFIHPSRQQSFIQPSRQQSFIQPSRQPSGRSAVAYL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccaaccgatagagctggcagcactagtcctgtctctattgggcttaataggc
gtcgcggcaagcacggggatgcccatgtggcgcgtgactgcgttcattggtgagaacatt
attgtgatggagacgcgctacgagggcctgtggatgaactgttttcgacaagccaacatt
cgcatgcagtgcaaggtttatgattcactcctggcccttacgccagacctccaggctgcc
cgaggcctcatgtgctgctcggtggcactggctgccattggcctgttcgtggccatcaca
ggaatgaaatgtactgcgtgcatacaagacaacgaccgagccaagcgtatggtcctcatc
gtggctggctctctcattatccttgcctgcatctgctccattattcctgtttcctggact
ggcaacgtaattatccgtgatttctacaaccccctcctgattgacgcccagcgacgggag
cttggcgaggcgctctacatcggctgggtttcctctgtgctgctttttgccggaggatgt
attttcgcgtgttgcggcggctcccaggagaaacgtgccgaccagcctcgctacgcttac
aacagggatgtgccgtatatggcgtaccaaccgcaaccagtggcataccagcccagacct
gcagccgcctacagtttagcgtccagagagccatcttttatccagacatccacacaacca
tccatcgctcagtcatatagacagcagagcttcatccatccgtctaggcagcagagcttc
atccagccatctaggcagcagagctttatccagccgtctagacagccatcaggtcggagt
gctgttgcctatctatga
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