Silurus meridionalis (southern catfish): 124394657
Help
Entry
124394657 CDS
T08004
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00565
Ether lipid metabolism
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
124394657 (pafah1b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124394657 (pafah1b1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124394657 (pafah1b1a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124394657 (pafah1b1a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124394657 (pafah1b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
LisH
eIF2A
Nucleoporin_N
Pox_A_type_inc
LisH_2
ARMC9_LisH
DUF2570
DUF6813
Motif
Other DBs
NCBI-GeneID:
124394657
NCBI-ProteinID:
XP_046718984
LinkDB
All DBs
Position
12:complement(11644348..11668289)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNKAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITSGGPIGQKRDPKEWIPRPPERYALSGHRSPVTKVIFHPVF
SVMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESASPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGLLFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTAPYVVTGSVDQQVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaacgggacgaactaaataaagctatagctgattaccttcgt
tccaatggctatgaagaggcatattcagttttcaagaaggaggcggaattagacatgaat
gaagaattggataagaaatatgctggccttttggaaaagaaatggacttcagttatcaga
ttacagaagaaggtgatggagttagaatcaaagttgaatgaagcaaaagaggaaattact
tcaggaggccctataggacagaaacgagaccccaaagaatggatcccccgtccccctgag
agatatgccctcagtggccacagaagtcctgtcaccaaggtcatctttcacccggtcttc
agtgtcatggtgtctgcttcagaggatgctacaataaaggtatgggattatgaggccgga
gactttgagcgtaccctgaaaggccatacagactctgtgcaggacatctcttttgatcag
agtggaaagctgctggcttcctgttcagcagacatgactataaaactctgggacttccaa
ggctttgagtgcatcaggaccatgcatgggcatgatcataatgtttcatctgtagctata
atgcccaatggagatcatatagtatctgcttctagggataaaaccattaaaatgtgggaa
gtggccactgggtattgtgtgaaaacttttactggccacagagagtgggtgcgtatggta
cggcccaaccaggatggctctttgattgccagcagctccaatgaccaaacggtgcgtgtg
tgggtggtggctacgaaggagtgcaaggctgaactgcgggaacacgagcatgtagtggag
tgcatctcatgggctcctgaaagtgctagtcccactatactggaggccactggctctgag
actaagaagagtgggaaacctggacctttccttctgtctggctcaagagacaaaactatc
aaaatgtgggatgtcagcactggcatgtgccttatgacactggttggccatgataactgg
gtgcgtgggctgctcttccaccctggtggaaagttcattgtgagctgtgctgatgacaag
actttgaggatctgggactacaaaaacaagcgttgcatgaaaaccttgagtgcccatgaa
cattttgttacttctctggattttcacaagactgctccgtatgtggtcactgggagtgta
gatcagcaagttaaagtgtgggagtgtcgctga
DBGET
integrated database retrieval system