Silurus meridionalis (southern catfish): 124394660
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Entry
124394660 CDS
T08004
Symbol
rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124394660 (rrp8)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
124394660 (rrp8)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124394660 (rrp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
124394660
NCBI-ProteinID:
XP_046718991
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All DBs
Position
12:5317233..5327017
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AA seq
513 aa
AA seq
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MFAEEEWTDNMPAAEQGKLVVNTEPVVGKHKIISRHCLKRTLQTLGSAPDWVYMKPSAGS
DEEMEEAPTHIVKKKKKQRCKKHKKNSGTRTEGDKDSETAMLQKPLEKQQKKLKVDTDNT
ERSVKKMNEVGEDSTEKRLNRQQWKNKIKNKKRCKNKFLFSSAGVKEEKGMTQAKDLSIA
TKMKNDDLSLWRTASKEKNDDVTLRTDAPKKANLDTHQLTDMKTVCDELKSNANNQCEKQ
RPLKVDKKSLLQAKKLQSFLNSHTIKSDEKICDSELGKKKDDSKKDSEHQLDRSSALRSR
MEKRLESARFRYINELLYTSTSGEAKRMFKQDPDAIKIYHKGYTEQVKQWPANPVDSIIS
YIRQRSSSLIIADFGCGDCKIAQSVKNKVHCFDLAPICDLVTACDMANVPLSDSTVDIAV
FCLSLMGTNLADFLAEANRVLVMGGVLKIAEVASRFDNIRQFTGALSRLGFMLASKDTAN
SHFYSFEFQKTHNVPNDVRKIGLELKPCLYKKR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggaggaatggaccgataacatgccagctgcagaacagggcaagctggta
gtgaatactgaacctgttgttgggaagcacaagataatcagcaggcattgtcttaagcga
actctacagaccctagggtcagcaccagactgggtgtatatgaaaccttctgcaggtagt
gatgaggaaatggaagaagctcctacacatattgtcaagaagaaaaagaaacaaaggtgt
aaaaaacacaagaaaaattctggcacaagaaccgaaggagataaggacagtgaaacagca
atgctgcagaaacctctggagaagcaacaaaagaagcttaaagtggacacagacaacact
gaaagaagcgttaaaaaaatgaatgaagttggagaagattctactgaaaaaagattaaac
cgacaacagtggaagaacaaaataaagaacaagaaacgatgcaagaataaattccttttc
agttcagctggagttaaagaagaaaaaggaatgactcaggcaaaggatctctcaatagca
actaaaatgaagaatgatgatttgtcactttggagaacggcatctaaagaaaagaatgat
gatgtaacattacgtacagatgcacctaaaaaagcaaacctagacacacatcagttaaca
gacatgaaaacagtctgtgatgaattgaagtcaaatgcaaataatcagtgtgaaaaacag
aggcctctcaaagtagataaaaagtctttgctccaggctaagaaactgcagagcttttta
aacagccataccattaaaagtgatgaaaaaatatgtgactcagaacttgggaagaaaaaa
gatgattcaaaaaaagacagcgaacatcaactggatcgatccagtgctttaaggtctcgg
atggagaagcggttagagtcagctcggtttcgctacataaatgagctgctttacacttcg
acaagtggtgaggctaaacgcatgttcaaacaggatcctgacgctattaagatttaccac
aaaggctacactgaacaagtgaaacagtggcctgcaaatccagtggattccatcatctcc
tatattcggcaaagatcgtcatctttgataattgcagactttggatgcggtgattgcaag
attgcacagagtgtgaagaacaaagtgcactgcttcgatttggctccaatttgtgacctt
gtcactgcctgtgatatggccaatgtgccacttagtgactccacagtagatattgcagtc
ttctgtctttctcttatggggaccaaccttgcagactttttggctgaggcaaacagagtt
ctggtgatggggggtgtcctcaaaattgcagaagttgcaagcagatttgataatatacgc
caattcactggggccttatctcgtctgggctttatgttggccagtaaggacacagccaac
agccacttctactcctttgagtttcagaagacacacaatgttccaaatgatgtaaggaaa
atcgggcttgaactcaagccttgtttgtacaagaaacggtaa
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