KEGG   Silurus meridionalis (southern catfish): 124394728
Entry
124394728         CDS       T08004                                 
Symbol
rabggtb
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:smeo01006]
    124394728 (rabggtb)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124394728 (rabggtb)
Enzymes [BR:smeo01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     124394728 (rabggtb)
Prenyltransferases [BR:smeo01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   124394728 (rabggtb)
Membrane trafficking [BR:smeo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    124394728 (rabggtb)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    124394728 (rabggtb)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C
Other DBs
NCBI-GeneID: 124394728
NCBI-ProteinID: XP_046719120
LinkDB
Position
12:26264243..26280323
AA seq 331 aa
MGTPIKDVVIKPDAPNTLLLEKHADYIAVYGSKKDDYEYTLSEYLRMSGIYWGVTVMDLM
NQLHRMNRDEIINFITSSQHECGGFSASVGHDPHLLYTLSAVQILTLYDSIKVINVDKVV
EYVRGLQQDDGSFAGDKWGEIDTRFSFCAVATLALLGRLDAVDMDKSVQFVLSCMNFDGG
FGCRPGSESHAGQIYCCTGFLSITGQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVC
YSWWVLAALKIIGRIQWIDKAKLRTFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL
LGYEQIKAVNPVFCMPEDVLQRIGLHTDLLT
NT seq 996 nt   +upstreamnt  +downstreamnt
atggggactccgataaaggatgtagtgattaaacctgatgctccaaacacactccttctg
gagaaacacgcagattacatcgctgtgtacggctccaaaaaagacgactatgagtacacc
ctatcagagtatctgaggatgagtgggatatattggggtgtgacagtgatggatctgatg
aatcaacttcaccgcatgaaccgagacgagatcatcaactttattacatcaagtcagcac
gagtgtggaggcttcagcgccagcgtgggacacgacccccacctactgtacacactcagt
gcagtacagatcctgaccttgtatgacagcattaaggtgatcaatgtggataaagtggtg
gagtacgttcgggggctgcagcaggatgatggctcgtttgcaggagataaatggggtgag
attgatacgaggttctcgttctgtgccgtggccacactcgctctgctgggcaggttggat
gcggtggatatggataaatcggtgcagtttgttttgtcctgtatgaactttgatggaggt
tttggctgcagacccggttctgagtctcacgctggacagatttactgctgtacaggtttc
ctctccatcacaggtcagctccatcaggtaaacgctgatctgttggggtggtggctgtgt
gagagacagcttccgtctggaggtctcaatggccgacctgagaagctgccggatgtgtgt
tactcatggtgggttctggctgcactgaagatcattggaaggattcagtggattgataaa
gctaagctcaggacatttatcctggcgtgtcaggacgaggagaccggaggattcgctgac
cgacctggagacatggtagacccgttccacactctgtttggtatagctggtctctctcta
ctgggttatgaacagattaaagcagtgaatccagtcttctgcatgccagaggatgttcta
cagagaatcggcctccacacggacctgctcacctaa

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