Silurus meridionalis (southern catfish): 124394736
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Entry
124394736 CDS
T08004
Symbol
tnfb
Name
(RefSeq) tumor necrosis factor b (TNF superfamily, member 2)
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124394736 (tnfb)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124394736 (tnfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124394736 (tnfb)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Tumor necrosis fators
124394736 (tnfb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
TMEM52
Tetraspanin
GPHR_N
DUF4381
Motif
Other DBs
NCBI-GeneID:
124394736
NCBI-ProteinID:
XP_046719127
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All DBs
Position
12:17477806..17479887
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AA seq
246 aa
AA seq
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MENKFTAADLEAALGDVYQSTVEPVKSPRSWTWTIVGVMVFLLLCGVASLCFAWHFTNKH
QGELSLKLQSTTDTDTLRQQKMLSQIAKSTKAAIHLHASDMDHKNRSPRWVSGVDQSFTK
GGLKLENNYILIPHDGLYFVYSQASFDILCKSSEDDHGSSNTHLSYGVRWSSLTSPSSNK
RFLLSGFKTVCQTKMEEQMNGPPVYESIYLGAVFQLYKGDKLSTESNHFADINEHSSKTF
FGVFEL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagttcacagcagccgacctagaagccgcattgggagatgtttaccaatct
accgtggaacctgtgaagtcgcccagatcttggacatggacgatagttggtgttatggtc
ttccttttgctctgtggtgtggcatctctctgttttgcatggcacttcacgaataagcat
caaggtgagctttccttgaagctgcaaagcaccacagacacagacacattaaggcaacag
aaaatgctatctcagatcgcaaagagtacaaaggcagccattcacctccatgcttcagat
atggaccataagaatcgttctccacgctgggtgagtggagtggaccagtccttcactaaa
ggaggtctcaagctggaaaacaactacatcctcattccccatgatggcctgtactttgtg
tacagccaggcatcttttgacatcttgtgcaagtcaagtgaggacgatcatggcagcagc
aacacacatctgagctatggtgttcggtggtcatcccttacatcaccgtcctctaataaa
aggtttttgctcagtggattcaaaaccgtgtgccaaactaaaatggaggagcaaatgaat
ggacctcctgtctatgagtctatctatcttggtgctgtctttcaactttataagggggac
aaactgtcaacagagtccaaccattttgctgacatcaacgagcacagttccaaaaccttt
tttggtgtgtttgagctgtga
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