Silurus meridionalis (southern catfish): 124394749
Help
Entry
124394749 CDS
T08004
Name
(RefSeq) calcium-activated chloride channel regulator 3A-1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124394749
Ion channels [BR:
smeo04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
124394749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
fn3
MG2
VWA_CoxE
GBD_IRG7_N
GEVED
GBD_Hemicentin
Motif
Other DBs
NCBI-GeneID:
124394749
NCBI-ProteinID:
XP_046719139
LinkDB
All DBs
Position
12:4191546..4202542
Genome browser
AA seq
882 aa
AA seq
DB search
MVKMLAVVVLFLFALKSATTIRLDGNGYTDILVVINPAVPENEELLNQIKKMFISGSEYL
FEALDRKVFFKEVKILVPPNWTSGKYEKATTEIYKKGKIRIEDSFSQYGNEPYTHQPEGC
GHEGEYIHLTPDFLLNNHISEPYGPRDRVFVHEWAHLRWGVFDEYNTREPFYLSAAGQIQ
PTRCTDKISGEWYELNNQNPTPCQIDASGKPTSSCEFFPDYIQTAKASIMFMQSLFSVKA
FCGEKEHNYEAPNEQNKQCEKATRTVIFEDSVDKDTLRNLNPLSSVPTPPTFKVIQRGIR
VICLVLDVSGSMQGLRISQQQRAATFFLNQITDEKQFVGLVTFSTDAQILSPLTKIDGPA
TRQKLINSLPTVAIGSTNICKGLRKGFELLRTDDGQTIGDEIIFLTDGEASDNVQDCLQE
SVQSGAIIHTLAFGPSADNILRTMADQTDGKFIVAEESILSNQLVDAFSSLTVYDGNSFT
QPIQLESTGTDVKDWFNGTVPIDRSVGNHTTFTIIYEKRAPTVNIVSPSGVVYDQRNITD
SANTITFTIPGTAEPGNWRYSFFNKETSAQQMSLTVISRAAHEDVYPVTVTARMDQQTSD
GTKPMVVLAEVSQNYNPVLGASVWANLRSDTGHSVELQLLDNGAGADVFKNDGIYSRYFT
KLKRGKYNLKVRVEHQQGAVQVFFHRHSGSLYIPGHIVDGKVKLNPPKPPINVQPVDVGN
FTRTVTGESFEVERDTNINFPPNKITDLIAEIKEDTVLLNWTAPGEDFDVGKVKSYEIRW
SDDLKKLQENFTSCDLDNSSSLVPQESGFAEQYFFQPNITIKNGITLFFAVQSMDKESTK
SEVSNIARATNYVPGRGSSTIITQGPNAIIISVCVVAIVNVF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatgcttgctgttgtggtgttgtttctatttgcactgaaatctgcaacaaca
atcagattagatggaaatggatacacagatattctggttgtcattaaccctgctgtacca
gagaatgaagaacttctaaatcaaatcaagaaaatgtttatcagtggatcagaatatctg
tttgaagctttagaccgcaaggtgtttttcaaggaagtgaaaatactggtaccaccaaac
tggacatcaggaaagtatgagaaagcaacaacagaaatttacaaaaagggcaaaataaga
atagaagattcattttcacaatatggtaatgagccatatactcatcaaccagaaggatgt
ggacatgagggtgaatacattcatttaacccccgatttcttgttaaacaaccacatttct
gaaccatatggacctagagacagggtttttgtgcatgaatgggctcacctcagatgggga
gtatttgatgaatataatacgagagaaccattttacttgtctgctgctggtcagattcaa
ccgacaaggtgtactgataagatttctggtgaatggtatgaacttaataatcagaatcct
acaccttgccaaattgatgcatctggcaaacccacatccagctgtgaattttttccagat
tatatacaaactgcaaaggcctcaataatgttcatgcaaagcttattttcagtaaaagct
ttttgtggagagaaggaacataactatgaagcccccaatgagcaaaataaacagtgtgaa
aaagcaacacgtacagtaatctttgaggactcggtagacaaagatacccttcgcaatctg
aatcctttgtcatctgtaccaacacctccaacattcaaagtcatacagaggggaatccgg
gtcatctgtctcgtccttgatgtctctggaagcatgcaagggctgagaataagtcaacaa
caacgagctgctacatttttcttaaaccaaataacagatgaaaaacaatttgtgggtctg
gtgacttttagtactgatgctcaaatactaagcccactgacaaaaatagatggaccggcc
acaagacagaaactaattaatagcttgccaacagttgcaattgggtcaacaaatatttgt
aaaggactcagaaaaggttttgagcttcttcgaaccgatgacggacaaacaataggagat
gaaattatttttctgacggatggggaagcatctgataatgttcaggactgtttgcaggaa
tctgttcaaagtggtgcaattattcacactttagcttttggcccgagtgcagacaatata
ctgagaaccatggctgatcaaaccgatggaaagtttatcgtagccgaagaatctattctt
tccaaccagctcgtggatgccttttcctcattgacagtgtatgatggaaattccttcaca
cagcccattcagcttgaaagcactggaaccgatgttaaagattggttcaatggaacagtt
cccatcgaccggtctgtaggaaaccacaccacctttacaataatatatgaaaaacgtgca
ccaactgtgaatatagtgtcaccaagtggtgtggtttacgatcagagaaacatcactgac
agtgcgaacacaatcactttcactattccaggaactgcagagccaggaaactggaggtac
agcttcttcaataaagaaacatctgcacaacaaatgagtttaacagtaatcagtcgggca
gctcatgaagatgtttacccagtcacagttacagccagaatggaccagcagaccagtgat
ggaaccaaacccatggttgtgttggctgaggtcagtcagaattataatcctgtattgggg
gccagtgtttgggcaaatctgagatcagatactgggcactcagtagaacttcaactcctt
gataatggagcaggagctgatgtgtttaaaaatgatgggatctattcaagatattttact
aaattaaagcgtggaaaatacaatctaaaagtgagagtggaacatcaacagggagcagtc
caggttttcttccacagacacagtggcagtctgtatatacctggacatattgtggatggt
aaagtgaaattaaaccctcctaaacccccaataaatgtgcagccagttgatgtgggcaac
ttcacaagaacagtcactggggaaagttttgaagtggaaagagatacaaatataaatttc
cctccaaacaagatcacggatctaattgcggaaatcaaagaggacaccgtgcttctcaac
tggacagctcctggtgaggactttgatgtgggaaaagtcaaatcctatgaaatcagatgg
agtgacgatttgaagaagcttcaagagaatttcaccagctgtgatctggacaacagttca
tcacttgttcctcaagagtcaggctttgctgaacagtacttttttcagcctaatattaca
ataaaaaatggcatcacacttttctttgctgttcagtcaatggacaaagagtcgaccaag
tctgaggtatccaacattgctcgagcaacaaattatgtcccaggtcgaggatcctcaact
attataactcaaggcccgaatgctatcatcatatctgtctgtgttgtggccatagtgaat
gtgttttag
DBGET
integrated database retrieval system
