Silurus meridionalis (southern catfish): 124394771
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Entry
124394771 CDS
T08004
Symbol
zmp:0000000529
Name
(RefSeq) WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124394771 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124394771 (zmp:0000000529)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
PD40
Beta-prop_EML
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
124394771
NCBI-ProteinID:
XP_046719167
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Position
12:2180727..2189233
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AA seq
649 aa
AA seq
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MAGDGGALKDINEIKSQFRTREGFYKLLTLSDSQQRAGLARGPGAGSGAAGAASIPGGGG
GLVPGPGASSPASAGFLPPVRVSMVKLQPEDPSEESERVCFNVGRELYFYTYTNIKKAVD
LSKPIDKRIYKGTQPTCHDFNQYSATADSVALIVGFSAGQVQYLDPIKKETSKLFNEERL
IDKTKVTCLKWLPKSENLFLASHASGHLYLYNVEHPCGTTAPQYSLLRQGEGFAVYACKT
KTPRNPLLRWAVGEGGLNEFAFSPDGVHIACVGQDGCLRVFHFDSMELHGVMKSYFGGLL
CVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSIEEEEPME
LSGSEEDLHQGQGALNFGRVRTSSTLSRLSRHSSKGGPSVSYRFGSVGQDTQFCLWDLTD
DVLYPRLPLSRALTNTFGSNAPPSISAGLNSTSGSGGVEGHHHPSNTHQTASLPLPLPRS
LSRSNSLPHPAVANASKNQGGTESGGTGVSGVGSSAPFSIGRFATLSLQERKSDKSATGG
EKEHKRYHSLGNISKSNDKINVAPRSNRLDASKVLGTTLCPRMNEVPLLEPLVCKKIAHE
RLTVLVFMDDCIITACQEGLICTWARPGKMHSSQPLSTQNGNSPSGTVV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgatggaggcgctctgaaggatatcaacgagatcaagtcgcagttccgcacc
agggagggtttttacaagctgctcacgctctcggactcgcagcagcgggccggcttggcg
cgcggtcccggcgccgggagtggcgcagccggtgctgcctcgataccggggggcggtggc
ggtctggtacccggacccggcgcctcctctccggcttcggcgggcttcctgcccccggtg
cgggtctccatggtgaagcttcagccggaagacccgagcgaggagtccgagcgtgtgtgc
ttcaacgtcggccgcgagctctacttctacacctacaccaacatcaaaaaggcagtggat
cttagtaagcctatagataagcgtatatataaagggacgcagccgacatgtcacgacttc
aatcagtattctgcgactgcagacagcgtggctctcatcgtgggtttttcggctggccag
gtgcagtacctggaccccatcaaaaaagagaccagcaagcttttcaatgaagagagatta
atagacaaaactaaagtgacttgtctcaaatggcttcctaaatctgagaacttattcctg
gcctcccatgctagcgggcacctctacctctataacgtggagcacccatgtggcacaaca
gcgccgcagtattctctgcttcggcagggtgaagggttcgcggtttatgcttgcaagacc
aaaacgccccgtaatccacttttgagatgggcagtaggggaaggcgggctgaacgaattc
gcgttttcccccgacggtgtgcacatagcatgtgtcggccaagatggctgcctacgtgtc
tttcatttcgattcgatggagctgcacggtgtcatgaaaagctactttggtggcttgctc
tgcgtttcttggagtcccgatggaaaatatttggctaccggtggagaagatgacctggtc
actgtatggtcatttgcagaaagtcgtgtggtggcacgcggtcacggtcacaagtcctgg
gtcaacgtggtggcttttgacccctttactactagcatagaagaagaggaaccgatggaa
cttagcggtagtgaagaggacctccaccaaggccaaggggcactaaatttcggtcgcgtg
cgaaccagcagcactttatcccgtctctctcgacacagctctaaaggagggccgtctgtc
tcgtatcgcttcggatcagtgggacaagacacccagttttgcctttgggatctcacagat
gatgtcctgtatcctcgacttcctctttcccgtgccctcaccaacacgttcggctccaac
gcgccaccttccatcagtgcagggttgaacagcacaagcggaagtggaggagttgagggt
caccatcacccttccaacacccaccagacggcttcattaccccttccactacctcgctcc
ctctcgaggtccaattccctgccacatcctgctgttgcgaatgcttcgaaaaaccaaggg
ggaacagaaagcggagggacgggcgtaagcggcgtaggaagcagcgccccctttagcatt
ggacgttttgcaacgctatcgctccaagagcgcaaatcagacaagtctgccactggaggg
gaaaaggagcacaagcgctaccacagtcttgggaacataagcaagagcaacgacaagatc
aatgtagcaccgcgtagcaatcgattagatgcgtctaaggtgttgggaacaacgttgtgt
ccacgcatgaatgaagtccccttgctcgaacctctagtttgtaagaagatcgcccacgaa
aggctcacggttcttgtctttatggacgactgcatcatcaccgcatgccaagagggactc
atctgcacctgggcacggccaggcaaaatgcattcttctcagccattatcgacacaaaac
ggaaactcgcccagcggaacggtggtatag
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