KEGG   Silurus meridionalis (southern catfish): 124394771
Entry
124394771         CDS       T08004                                 
Symbol
zmp:0000000529
Name
(RefSeq) WD repeat-containing protein 20
  KO
K24731  dystrophia myotonica WD repeat-containing protein
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:smeo04990]
    124394771 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:smeo04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   124394771 (zmp:0000000529)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WD40_Prp19 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st PD40 Beta-prop_EML WDR55 NBCH_WD40
Other DBs
NCBI-GeneID: 124394771
NCBI-ProteinID: XP_046719167
LinkDB
Position
12:2180727..2189233
AA seq 649 aa
MAGDGGALKDINEIKSQFRTREGFYKLLTLSDSQQRAGLARGPGAGSGAAGAASIPGGGG
GLVPGPGASSPASAGFLPPVRVSMVKLQPEDPSEESERVCFNVGRELYFYTYTNIKKAVD
LSKPIDKRIYKGTQPTCHDFNQYSATADSVALIVGFSAGQVQYLDPIKKETSKLFNEERL
IDKTKVTCLKWLPKSENLFLASHASGHLYLYNVEHPCGTTAPQYSLLRQGEGFAVYACKT
KTPRNPLLRWAVGEGGLNEFAFSPDGVHIACVGQDGCLRVFHFDSMELHGVMKSYFGGLL
CVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSIEEEEPME
LSGSEEDLHQGQGALNFGRVRTSSTLSRLSRHSSKGGPSVSYRFGSVGQDTQFCLWDLTD
DVLYPRLPLSRALTNTFGSNAPPSISAGLNSTSGSGGVEGHHHPSNTHQTASLPLPLPRS
LSRSNSLPHPAVANASKNQGGTESGGTGVSGVGSSAPFSIGRFATLSLQERKSDKSATGG
EKEHKRYHSLGNISKSNDKINVAPRSNRLDASKVLGTTLCPRMNEVPLLEPLVCKKIAHE
RLTVLVFMDDCIITACQEGLICTWARPGKMHSSQPLSTQNGNSPSGTVV
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggccggcgatggaggcgctctgaaggatatcaacgagatcaagtcgcagttccgcacc
agggagggtttttacaagctgctcacgctctcggactcgcagcagcgggccggcttggcg
cgcggtcccggcgccgggagtggcgcagccggtgctgcctcgataccggggggcggtggc
ggtctggtacccggacccggcgcctcctctccggcttcggcgggcttcctgcccccggtg
cgggtctccatggtgaagcttcagccggaagacccgagcgaggagtccgagcgtgtgtgc
ttcaacgtcggccgcgagctctacttctacacctacaccaacatcaaaaaggcagtggat
cttagtaagcctatagataagcgtatatataaagggacgcagccgacatgtcacgacttc
aatcagtattctgcgactgcagacagcgtggctctcatcgtgggtttttcggctggccag
gtgcagtacctggaccccatcaaaaaagagaccagcaagcttttcaatgaagagagatta
atagacaaaactaaagtgacttgtctcaaatggcttcctaaatctgagaacttattcctg
gcctcccatgctagcgggcacctctacctctataacgtggagcacccatgtggcacaaca
gcgccgcagtattctctgcttcggcagggtgaagggttcgcggtttatgcttgcaagacc
aaaacgccccgtaatccacttttgagatgggcagtaggggaaggcgggctgaacgaattc
gcgttttcccccgacggtgtgcacatagcatgtgtcggccaagatggctgcctacgtgtc
tttcatttcgattcgatggagctgcacggtgtcatgaaaagctactttggtggcttgctc
tgcgtttcttggagtcccgatggaaaatatttggctaccggtggagaagatgacctggtc
actgtatggtcatttgcagaaagtcgtgtggtggcacgcggtcacggtcacaagtcctgg
gtcaacgtggtggcttttgacccctttactactagcatagaagaagaggaaccgatggaa
cttagcggtagtgaagaggacctccaccaaggccaaggggcactaaatttcggtcgcgtg
cgaaccagcagcactttatcccgtctctctcgacacagctctaaaggagggccgtctgtc
tcgtatcgcttcggatcagtgggacaagacacccagttttgcctttgggatctcacagat
gatgtcctgtatcctcgacttcctctttcccgtgccctcaccaacacgttcggctccaac
gcgccaccttccatcagtgcagggttgaacagcacaagcggaagtggaggagttgagggt
caccatcacccttccaacacccaccagacggcttcattaccccttccactacctcgctcc
ctctcgaggtccaattccctgccacatcctgctgttgcgaatgcttcgaaaaaccaaggg
ggaacagaaagcggagggacgggcgtaagcggcgtaggaagcagcgccccctttagcatt
ggacgttttgcaacgctatcgctccaagagcgcaaatcagacaagtctgccactggaggg
gaaaaggagcacaagcgctaccacagtcttgggaacataagcaagagcaacgacaagatc
aatgtagcaccgcgtagcaatcgattagatgcgtctaaggtgttgggaacaacgttgtgt
ccacgcatgaatgaagtccccttgctcgaacctctagtttgtaagaagatcgcccacgaa
aggctcacggttcttgtctttatggacgactgcatcatcaccgcatgccaagagggactc
atctgcacctgggcacggccaggcaaaatgcattcttctcagccattatcgacacaaaac
ggaaactcgcccagcggaacggtggtatag

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