Silurus meridionalis (southern catfish): 124394827
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Entry
124394827 CDS
T08004
Symbol
tsku
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124394827 (tsku)
Proteoglycans [BR:
smeo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
124394827 (tsku)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRR_EndoS
LRRNT
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
124394827
NCBI-ProteinID:
XP_046719259
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All DBs
Position
12:24179488..24190401
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AA seq
351 aa
AA seq
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MAALLCLRLSSLLALATAGGVKNCHPKCRCEVESYGLFDSFSLTKVDCSGLGPETTPIPI
PLETSHLDLSHNSISSVTDSMLSGPGYTTLVSLDLSSNLISQVSSKAFNKLRYLETLDLS
QNILENLGDGCFSGLPLTEVDLSDNKFGEFDLNVFSTRGQETPISVDLSNNLLSTVSRNP
HLHVPYIKSLMLAGNQLRKVPRLAGIPLQYLSLDGNLILGIDEGAFEELTDLVYLSLSGL
PELSVIHPNSFRGLKNLQVLDLSNNFQLKTLSPDVFNGLSALQELNLSKSVVTPLPVTIF
NHMPSIKSATLGPNMHCWKTHKQGQFHRQIGQAKANDILTCDVPGIILYAT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctcctgtgcctcagactatcctcgctgctcgccctggccacagcaggaggg
gtgaagaactgccatccgaagtgccgctgtgaggtggagagctacggcctgtttgatagt
ttcagcctcaccaaggtggactgcagtgggcttggaccagaaaccactcccattcccatc
cctctagaaacgtcccacttggacctgtctcacaattccattagctccgtcactgactcc
atgctgtcaggacccgggtacaccactctggtcagcctggatctcagcagcaacctcatt
tcacaagtgagctccaaggcctttaacaaactacgttacctggagactctggatttgagc
cagaacattttggagaacctcggcgatggatgcttttccggtctccccttaaccgaggtg
gatctcagcgacaacaaatttggcgagtttgacctaaacgtattcagcacacgaggccag
gaaacccctatcagtgtagatctttcgaacaaccttctcagcacggtttcgagaaaccct
caccttcatgtgccttacatcaaaagcctgatgctggcaggcaatcagctaaggaaggtg
cccagacttgctggaattcccttgcagtatttgagcctggatggaaatcttatccttggt
attgacgaaggagccttcgaggagctgacggatcttgtttatctttctctcagtggcctc
cctgagctttcggtcatccatccgaacagcttcagaggcctgaaaaatctccaagtcctc
gacctttcgaacaactttcagctcaagacgttgagtccagatgtgtttaatggactaagt
gctttacaggagctcaatctctccaaatcggtggtcacgccgttacccgtcaccatcttt
aaccacatgcccagtattaaaagtgccactctggggccaaatatgcactgctggaaaaca
cacaagcaaggacagtttcaccggcagatcggacaggccaaagcaaacgacattttgact
tgtgacgttccaggaatcatattgtacgccacttaa
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