Silurus meridionalis (southern catfish): 124394829 Help Entry 124394829         CDS       T08004                                  Symbol col4a3 Name (RefSeq) collagen alpha-3(IV) chain   KO K06237   collagen type IV alpha Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04510   Focal adhesion smeo04512   ECM-receptor interaction smeo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:smeo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124394829 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124394829 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     124394829 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:smeo04147]     124394829 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:smeo00536]     124394829 (col4a3) Exosome [BR:smeo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    124394829 (col4a3) Glycosaminoglycan binding proteins [BR:smeo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124394829 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  124394829 NCBI-ProteinID:  XP_046719262 LinkDB All DBs Position 12:complement(3467536..3511068) Genome browser AA seq 1669 aa AA seqDB search MCATLLGILLLGLVTLAHAEVCENNAKLSCDCSGVKGERGDQGFPGFFGSPGDVGVLGDE GHPGPMGPTGHPGVPGIPGLKGSRGFPGKPGLWGSLGIPGLPGDEGPQGPPGSPGCNGTK GERGDPGASGSCGAAGLRGENGPPGPKGDTYYFPFPKDVMGGKGMPGKDGPKGMPGDPGA CGATGPMGCKGPRGECGCAGVQGEKGVQGLSMPGLQGIKGTQGFPGVPGRRGIKQFATAH RELKGEPGDIGDQGSPGMPGMPGPLGPKGEKGGTGDPGALGEAGLNGLSGEYGSNGSPGV RGNNGAPGLPGLKGIKGGRGCAGPPGECLPCNTPEKGERGPKGLTGPPGLKGIQGVSGFP GPSGEEGPGMPGTPGERGPPGFSGIKGEKGDRAPPLIGTIGPDGPCGIPGNRGDPGPKGL PDIHKREGQSGLRGEKGIQGPEGAIGEPGDQGDKGDTCDVCPLIGLTYGPTGPAGNPGPH GSPGLNGAPGHRGSMGIKGPEGAPGNPGSIGAPGIQGIQGHKGDPGFIGPGDNGDQGDPG FLGTSGRDGLDGIPGIPGIKGPKGEKGNSGPLGPKGNRGDPGFEGLPGFPGIKGFQGSPG IGAPGEPGGKGAFGVQGLQGDPGDPGEKGDPGAINVIRGDQGECGAKGPKGSPGQPGCLG AKGLCGPQGLNGLKGDKGLSEAGLQGQPGYKGEKGFQGCQGPPSIGLSGSPGPIGQCGMP GIKGDSSSGPPGPAGRRGPPGDDGIIGPTGESGCPGSPGVNGQPGRDGYPGPKGDAGYNG PQGLTGPPGVCTAGFPGIKGVQGLKGMPGMPGCRGLKGLQGEPGCQGLGLPGCPGPFGTP GFNGEAGPPGLAGHKGLKGKNGMPGSPGPRGTDGPPGSPGCPGPRGTPGYPGQPGLKGCT GSNGLPGGRGPQGLKGDQGDPGPKGEPLSYSNPGDPGDTGDTGHTGVTGCKGEQGIDGLP GSSGKNGLQGSPGPPGTKQSLKSSQIRNLNSPVSLSSWRSRPKGFSGEPGAVGCVGEVGP LGLPGPKGVKGTPGHCGLPGDPGNPGPNGLKGPKGEPSCPGPGAPGCPGEKGDPGLLGIK GKKGERGMCGTAGSPGSEGLCGEAGEPGIAGQPGPPGLPGDKGSDGHPGPPGCPGPMGPP GCPGSPGNPGILGLKGNQGSDGIPGPPGEKGSAGAPGYGPPGLAGEIGTPGIKGEPGCVG EAGPPGPSGLVGDPGPCGVPGLPGPPGNPGPQGLCVDGPKGERGLPGPPGQPGPSGICGP PGPPGLGLKGEKGDTGPPGPPGTCGPEGDSGPQGIQGSTGLIGFPGKKGDQGQKGETGPR GLPGKDGTRGPPGLSGPKGQRGPPGTPGELAYLQMIPISGDRGLPGPQGERGPPGESGSP GFRGFKGPPGPKGPRGNEGIPGAQGLRGEKGNKGLPGLAGALGFMGADGQKGSRGPPGRC MPDKSRDSFLFTRHSQTQEIPYCPDGSSEVYSGYSLLFVNGNNHGHGQDLGTLGSCLQMF STMPFLFCNSNNTCHYASRNDYSYWLSTDTLMPSNLPVVSGDSLEQYVSRCSVCDSPGNV IALHSQSRIVPPCPVGWKSLWEGYSFVMQTSVGSEGSGQPLSSPGSCLENFQKIPFIECH GRGTCNYYSDAYSYWMAALDPSEMFSKPSPQSKIDSPSIIGRCQVCMKE NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgtgcgcgacacttttgggaatattgctcctcggattggtgacgctcgcgcacgccgag gtatgtgaaaataatgcgaagctcagctgcgactgcagtggagtcaaaggcgaaagggga gatcaaggttttccggggttttttggctcaccaggagatgttggagttctgggagacgaa ggccaccccggaccgatgggccccacgggtcatccaggagtgccagggataccaggattg aaaggctcacggggatttcctggaaagcctggattgtgggggtctttaggaatacctgga ctcccaggagacgaaggccctcagggaccacctggtagccctggatgcaacggcacaaag ggtgaacgcggtgatcctggagcttcaggaagttgcggcgctgccggcttacggggtgaa aatggtccccccggccctaagggggacacatactacttcccgtttcctaaagatgtgatg ggaggcaaaggtatgccaggaaaagatgggccaaagggtatgcctggagatccaggtgcc tgcggagcaactggaccaatgggatgtaaaggacctagaggagaatgcggatgcgctggt gttcaaggagaaaagggtgtacagggactttcaatgccgggcctccaaggtataaaaggc actcaaggttttcctggtgtccccggacggagaggtataaagcagtttgcaacagcacac agagaactcaaaggggaaccgggagatataggagaccaaggcagccctggaatgccaggc atgccgggacctcttggccctaaaggagagaaaggaggcacaggagaccctggagctctg ggggaagctggactgaatggactttcgggagagtatggttctaatggttctccaggggtc aggggaaataatggggctcctgggcttcctggtttaaaggggataaaaggtggccgtggt tgcgctggtcctccaggagaatgtcttccatgcaatacacctgaaaaaggagaacgagga cctaagggcttaactggaccacctggattgaaaggaattcaaggtgtaagtggctttcct ggaccttcaggcgaagaaggaccaggtatgcctggaacccctggggagcgtggccctcct ggctttagcggaattaagggtgaaaagggagatcgagcacctccactgatcggaacaata ggacctgatggaccttgtggaatacctggaaatcgtggtgaccctggtcctaaaggactc ccagatattcataagcgtgagggtcagtcagggttgagaggagagaaaggcatacaaggg cctgagggggcaattggagaaccaggggatcaaggtgataaaggtgacacctgcgatgtg tgtcctttgataggccttacttatggacctacagggccagctggtaaccctggtccacat ggatctccaggtttaaacggggcaccgggtcacaggggatcgatgggtattaagggacca gaaggtgcacctggcaacccgggttcgattggtgctccgggcattcaaggaatccaagga cacaagggggaccccggttttataggacctggggataatggggaccaaggtgacccagga tttttggggacctcaggaagagatggactggatgggataccaggaataccaggaataaaa ggcccaaagggagagaaaggcaattcgggtcctttagggcctaaagggaaccgtggtgac cctggatttgaagggttaccagggtttcctggtattaaaggatttcagggctctcctggg attggagcacctggggaacccggtgggaagggcgcttttggtgtacaaggtctacaagga gatcctggagacccaggtgaaaaaggtgaccctggtgcgataaatgtaatacgcggagac cagggggagtgtggagcaaagggtcctaaaggttcacctgggcaaccagggtgtctggga gccaaagggttatgtggccctcaagggcttaatggcctaaaaggagataaaggattatca gaagctggattacagggacagcctggttataaaggtgaaaaaggctttcagggttgtcag ggtccacctagcattgggctatctggttccccaggaccaataggacaatgtggaatgcca gggataaagggtgatagttcttctggccctccagggcccgctggcagacgaggacctccg ggagatgatgggatcattggacctactggtgaatcaggttgtccaggaagccctggagtt aatggacagccagggagagatggatacccagggcctaagggtgatgcaggatataatggg ccacaagggttgaccgggcccccaggagtttgtactgccggatttccgggtattaaagga gtccaaggtttgaaaggaatgcctggaatgccagggtgtcggggtctgaaaggattgcaa ggcgagcctggatgtcagggtttaggtttacctggttgtcctggaccattcgggacacct ggttttaatggagaagctggtccacctggtctagctggacataagggattgaagggcaag aatggcatgcctggttccccaggccctcgaggaaccgatgggcctcccggcagccctgga tgtcctggacctcgtggaacacctggatacccgggacagcctgggcttaaaggttgtaca ggcagtaatggactaccgggtggcagaggtccacaaggcctgaaaggggaccagggggat ccaggtcctaaaggagaaccattaagttactccaatccaggagacccgggagacaccgga gacacaggtcatactggtgtgactgggtgtaaaggggaacaaggaatcgatggactacct ggcagctctgggaaaaatggattgcaaggcagccctgggccaccaggtactaaacaaagt ttaaaatccagtcaaatcagaaacctcaacagtcctgtatccttgtcctcctggagatcg aggccgaaagggttttcaggtgaacctggtgccgtgggttgtgttggagaagttggacct ttgggtctgccaggtcccaaaggtgtaaagggaacacccggtcattgtggactaccagga gaccctggaaatccaggaccaaatggactaaaagggcccaaaggtgaaccaagttgtcct ggaccaggagcaccaggatgccctggggagaagggtgatccaggcctgctgggaattaaa ggaaagaaaggagaaagaggaatgtgtggcactgctggttcgccaggatcagaagggctt tgtggagaagctggagaacctggaatagcaggacaaccaggacccccaggattgcctgga gataaaggttctgatggacatccaggccctccgggttgtccaggaccaatgggtccacca ggttgtcctgggtcaccaggcaatccaggtattttaggtctcaaaggaaaccaaggcagt gatggcatccctggaccccctggagaaaaaggaagtgcaggagctcctggatatggacct ccagggctagctggtgaaataggtaccccgggtattaaaggcgagccaggatgcgttggg gaagctggacctccgggaccaagtggtttagtcggagacccaggtccttgcggagtaccc ggactgccaggaccccctgggaatccaggtccacagggtttgtgtgtggatggccccaag ggggagcgaggccttcctggaccaccaggacaaccagggccctctgggatatgtggcccc ccaggaccacctggtcttggccttaagggagaaaagggggacacgggtccacctggccca ccaggaacttgtggtccggagggagacagtggcccacaaggaattcaaggtagtactggg cttattggtttccctggaaaaaaaggagatcaaggtcaaaagggggaaaccggacctcga ggtctaccaggaaaggatggcacacgtggtccaccaggactttcaggaccaaaaggccaa agaggaccacctggtacacctggggaacttgcttaccttcaaatgatacctatttctgga gatcgtggtctgcctggacctcaaggagaaagaggacctcctggagaaagtggttcacca ggatttagagggtttaaaggaccccctggccctaaaggaccccgcggaaatgaaggcatc cccggtgctcaaggtttgcgtggagagaagggcaataaaggattaccagggttggcagga gctttgggttttatgggtgccgatggtcagaagggctccaggggtccaccgggacgatgc atgccggacaagagcagagacagcttcctgtttactagacacagtcagacacaagagatc ccttactgccctgatggatctagcgaagtctactccggatactcgctcctttttgtcaac ggcaataaccacggacatggacaagatcttggcactttggggagttgtctacagatgttc tcgaccatgcccttccttttctgcaattcaaacaacacctgccattatgcctcccgaaac gactactcgtactggctgtccactgacactctcatgcccagtaacctgcccgtagtctca ggggattcgcttgagcagtatgttagcaggtgctcagtatgcgattctccaggtaatgtg atcgcgttacacagccagagccgtatagtccctccgtgcccagtcggatggaagtctttg tgggaaggctactcttttgtcatgcaaacgagtgtgggttccgagggctcggggcagccc ctgtcctctcctggctcgtgtttggagaacttccagaagataccctttatcgagtgtcac ggtcgaggcacttgtaactactactccgatgcctacagttactggatggccgctctggat cccagtgagatgttcagtaaaccatcgccacagtcgaaaatcgactctccgagcatcatc ggtcgctgtcaggtgtgcatgaaggagtag

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