Silurus meridionalis (southern catfish): 124394930
Help
Entry
124394930 CDS
T08004
Symbol
nf1a
Name
(RefSeq) neurofibromin isoform X1
KO
K08052
neurofibromin 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124394930 (nf1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_NF1
RasGAP
CRAL_TRIO_2
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
124394930
NCBI-ProteinID:
XP_046719383
LinkDB
All DBs
Position
12:complement(13184995..13242956)
Genome browser
AA seq
2804 aa
AA seq
DB search
MAAHKPVEWVQAVINRFDEQLPIKSGQQNTHTKVSTEHNKECLINISKYKFSLVINGLTN
ILKIVNNMRIIGESAEKNLYLSQLIILDTLEKCLAGQTKDCLRLDEAMLVKQLLPEICHF
LHSCREGQQHATQLRSSASAVLFSLSCNNFSAVFSRISTRLQELTVCTEDTVDVHDIELI
QYINVDCSKLKRLLQETVLKFKALKKPAQLAVINSLEKAFWNWVEYYPDEFTMLYQRPQA
DMADSAEKLFDLVDNFAESAKRKAAVWPLQIILLVLCPEITQSISKEVVEESKANKKLFL
DSLRKALAGHSSSKQLTESAAIACVKLSKACTYINWEDHSVIFLLVQSIVIDLKALLFNP
TKPFSRGTGCQSADVDLMIDCFVSCFRINPHNNQHFKVCLASTSPPTFHFVLVNSLHKII
TNSHLDWWPKIDTIYCYSGELRAMFADTQTRVIQSLSAHAPLRMTPSLTFKEKMTTSLKF
KEKSADLDSRSLLLALVKLIHADPKLMLHNPGKQGQEIQNSTAELIIGLVQLVPLTHTTE
LSQEAMEALLVLHQPETIELWNPDAPIETFWDISSQVLFLICKKLIGHQMINSTEILKWL
REILICRNKFLLKNKESATQGSLIPISRQAQTKLEVCLYSFLWSPDAEAVLVAMSCFRHL
CEEADIRCSVDELPVHTVLPNYNTFMEFASVSNMMATGRSTLQKRVMALLRRIEHPTAGN
IEAWEDTHAKWEQATKQILNHPKNKVDDGQEWINMTGFLCALGGVCLQQRSTPSLGTYSP
PMGPMSERKGSMISMGSCEVNSETPLSRFLEKLLSLMVCTHEKVGLHIRTNVKDLLGLEL
SPALYPMLFTKLRNSIGRFFDAQGPVPINDTNTLFVEQTIAIMKNLLDSHTEGSSEHLGQ
ASIETMMLNLVRYVRILGNGVHAIQIKTKLCQLVEVMMERRDDLSFCQEMKFRNKMVEYL
TDWVMGTSNQAADDDVKYLTRDLDQASMEAVVSLLAGLPLQPEEGDGVELMEAKSQLFLK
YFTLFMNLLNDCSEVEEDGQQVGERKRGMSRRLASLRHCTVLAMSNLLNANVDSGLMHSI
GLGYHKDLQTRATFMEVLTKILQQGTEFDTLAETVLADRFERLVELVTMMGDQGELPIAM
ALANVVPCSQWDELARVLVTLFDSRHLLYQLLWNMFSKEVELADSMQTLFRGNSLASKIM
TFCFKVYGAAYLQKLLEPLMRGVITSPEWQHISFEVDPTRLEPPENLEENQRNLLQITDR
FFLAIINSSSEFPPQLRSVCHCLYQATCHSLLNKATVKEKKENKKSVVSQRFPQNSIGAV
GSAMFLRFINPAIVSPYEAGILEKKPPPRIERGLKLMSKILQSIANHVLFTKEEHMRPFN
DFVKNNFEAARKFFLDIASDSPPSDSVNHSLSFISDGNVLALHRLLWNNQERIGQYLSSN
RDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHWSSLNLTSSKFEEFMTRHQVHEKEEFK
ALKTLNIFYQAGTSKNGNPVFYYIARRFKTGQINGDLLIYHVLLTLKPYYAKQYEIVVDL
THVGPSNRFKTDFLSKWFVVFPNFAYENVAAVFIYNCNTWVREYTKYHERLLTGLKGSKK
LLFIDSPARLAEYVEPDQQKLPASTLALEEDLKVFHNALKLAHKDTKVSIKVGSTAVQVT
SAERTRVLGQSVFLNDIYYASEIEEICLVDENQFTLTIANQGTPLTFIHQECDAIVQSII
HIRTRWELSQPDSIPQHTKIRPKDVPGTLLNIALLNLGSSDPSLRSAAYNLLCALTCTFN
LKIEGQLLETSGLCIPANNTLFIVSISKTLAANEPHLTLEFLEECISGFSKSSIELKHLC
LEYMTPWLRNLVRFCKHNDDAKRQRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQISD
LLDVVLDSFIKTSATGGLGSIKAEVMADTAVALASGNVKLVSSKVIGRMCKIIDKTCLSP
TPTLEQHLMWDDIAILARYMLMLSFNNSLDVAAHLPYLFHVVTLLVATGPLSLRASTHGL
VINIIHSLCTCSQLNFSEETKQVLRLSLTEFSLPKFYLLFGISKVKSAAVIAFRSSYRDR
SFSPGSYERETFALSSLETVTEALLEIMEACMRDIPGCKWLDQWTELAQKFAFQYNPSLQ
PRALVVFGCISKRVTHGQIKQIIRILSKASPLLSIDRGLESCLKGPDNYNSQVLIEATVI
ALTKLQPLLIQDSPMHRALFWVAVAVLQLDEVNLYSAGTALLEQNLHTLDSIRVFNDKSP
EEVFMEIRKPLEWDCKQMDHFVGLNFNSNFNFALVGHLLKGYRHPSSTTVARTVRILHTL
LGLVGKHRNCDKFEVNTQSVAYLAALLTVSEEVRSRCSLKHRKSLLLSDVTMENFPIDTY
SVYHPEPGCRPLKESQPWTSPKVSERYLAAYYPTMGQTSPRTRKSMSVDMGQPSQANAKK
LLGTRKSFDHLISDSKAPKRPEMESGITTPPKIRRVAENDYDIESQRIANSHLRKVSVSE
SNVLLDEEVLTDPKIQMLLLTVLATQVKYSTDEFHQRILYEYLAEASVVFPKVFPVVHNL
LDSKISTLLSMCQDPNLLNPVHGIVQSVVYHEESPPQYQPSCLQSFGFNGLWRFAGPFSK
QTQIPDYAELVVKFLDALIDTYLPGIEEEGGEESQRTPTSPYPPIVQSQLSITANLNLSN
SMTSLATSQHSPEGPIVYRRSPTLSHARTAEEMPPKTAASLPCSKSAVFPPHLVLPAGID
KENVELSPTSSLCSSSRARHGSASQVQKQRSTGSFKRTSIKKIV
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacacaagcccgtggagtgggtccaggccgtaattaaccgattcgacgagcag
cttcctatcaagtcaggacaacagaacactcataccaaagtcagcacagagcacaacaag
gaatgcttgatcaacatctccaaatacaagttttcccttgtcatcaatggcctgaccaac
atcctcaaaattgttaacaatatgcggataattggggaatctgcagaaaagaacctctac
ctctcacagctcattatcctggacactctggagaagtgcttggcagggcaaaccaaggac
tgcttgcgtctagacgaggcaatgctggtgaagcagttgctgcctgagatctgccacttc
ctgcactcatgtcgcgaggggcagcagcacgccacccaactgcgcagttctgcctcagcc
gtgcttttctcacttagctgcaacaacttcagtgccgtcttcagccgcatctccacgaga
ttgcaggagctaacagtatgcacagaggacactgtagatgttcatgacatagagctcatt
cagtacattaatgttgactgctctaaattgaagagattactacaagaaactgtactcaaa
tttaaagcactaaagaagcctgcacagctcgccgtcatcaacagtttggagaaggctttc
tggaactgggtagagtattatcctgatgaatttactatgctctaccagagaccacaggca
gatatggctgactctgcagagaagctgtttgacctggtagacaattttgcagagagcgct
aagaggaaagctgccgtgtggccactgcaaatcatacttctcgtactatgtcctgaaatc
acacagagcatctctaaagaagtggtggaggagagcaaggctaacaagaagttgtttttg
gatagtctaaggaaggccctggctggtcacagcagcagcaagcaattgactgaaagtgca
gccattgcctgtgttaaactgtctaaagcctgcacatacattaactgggaggatcattct
gtcatttttcttctggtacagtctattgtaatagacctcaaagctctcctgtttaacccc
actaagccattctccaggggcaccgggtgccagagcgctgacgtggatctgatgatcgac
tgctttgtgtcctgcttccgcatcaacccacacaacaaccagcacttcaaggtctgtctg
gcttccacctccccaccaaccttccattttgtcctggtcaactctttgcacaaaatcata
actaattctcatttggattggtggccaaagattgacacgatctactgctactctggagag
ctacgagccatgtttgctgacacacaaaccagagtcatccagagcctcagtgcccatgca
ccactaagaatgacaccaagtttgacattcaaagagaagatgacaaccagcctgaagttt
aaagaaaagtctgctgacctggactcacgctcacttctcctggctttggtcaaactcatc
catgctgaccccaaactaatgttacataaccctggaaagcagggccaggagatccagaac
agcacagctgagctcatcataggcctggtccagcttgtgcccttgacccacactacagag
ctctctcaggaggccatggaggcacttctggtgttgcatcaacctgagaccattgagctg
tggaaccctgatgcaccaattgagaccttctgggacattagttctcaggtcctatttctt
atctgtaaaaagctgattggccaccagatgatcaacagcacagagatcttgaaatggttg
cgggagattcttatctgcaggaacaagttccttttgaagaacaaagagagtgctacacag
gggagcctaatccccataagcagacaagcgcagaccaagctggaagtgtgcctgtattca
tttctgtggagcccagatgctgaggctgtactggtggccatgtcctgtttccggcacctg
tgtgaggaggcggacatccgctgcagtgtggacgagctgcctgtacacacggtcctaccc
aactacaacactttcatggaatttgcctccgttagcaacatgatggccactggtcgctct
accttacagaagagagtaatggcactgttaagaaggatagagcatccgacagctggtaac
atagaggcttgggaggacacgcatgctaaatgggagcaagcaacaaaacaaatactaaac
catccgaagaacaaagttgatgatggtcaggagtggatcaacatgaccggcttcctgtgt
gcactgggtggagtgtgtctgcagcagcgcagtactcccagtcttggtacctatagccca
cccatgggaccaatgagtgagcgcaagggctccatgatctccatgggctcatgtgaagta
aacagtgaaacacctctcagcaggttcctggagaagctgctgtccctcatggtgtgcaca
catgagaaagtaggcttgcacatacgcaccaacgtcaaagatctcctgggactggagctg
agcccggccctataccctatgctcttcaccaaactgcgcaacagcatcggacgtttcttt
gatgcacaggggccggtgcccataaatgacacaaatacattatttgtggagcagactatt
gcaatcatgaagaacctcctggacagccacactgagggtagctctgagcaccttgggcag
gccagcattgagaccatgatgctgaacttggtcagatatgttcgcattttaggaaacggg
gttcatgcaatacagattaaaactaaactttgtcaacttgtggaggtgatgatggaacgg
agagatgatctctccttctgccaagagatgaaattcaggaataagatggtggagtacctg
actgactgggtaatgggcacttccaatcaagcagcagatgacgatgtcaaatatctcaca
cgggaccttgaccaggccagtatggaggcggtggtgtctctgttggctggtttaccacta
cagcccgaggaaggagatggagtagagctgatggaggccaagtctcagctgtttcttaag
tacttcactctgttcatgaaccttctgaatgactgcagtgaggtggaagaggatgggcag
caggtgggggaaagaaagcggggcatgtccagacgtctcgcctcactacgccactgtact
gtacttgctatgtccaatttgctcaacgccaatgtagacagtggcctcatgcactctata
ggattgggctaccataaagacttgcagaccagggctacattcatggaggtgctgactaaa
atcttgcagcaaggcacagagtttgacactctggccgaaactgttttggctgaccgtttt
gaaaggctggtggagctcgtcaccatgatgggggatcagggggagcttcctatcgccatg
gcgctggccaatgtggttccctgctctcagtgggatgagttggccagggtgttggtgaca
ttgtttgactccaggcaccttctctaccaactgctctggaacatgttttctaaagaggta
gagctggctgactccatgcagactctcttcagaggcaatagtctggctagcaagattatg
accttctgcttcaaggtgtacggcgccgcttatcttcagaagctgcttgagcctctaatg
cgaggcgtcattacatctcctgagtggcagcacatcagctttgaggttgaccccaccaga
ctagaaccacctgaaaacctggaggagaaccagcggaacctgctgcagatcacagatcga
ttctttttggcgattattaactcctccagtgagtttcctcctcaactgcgaagcgtatgc
cactgtttgtaccaggctacttgccactccctactgaataaagccactgttaaagaaaaa
aaggaaaacaaaaaatccgtggtaagccagcgcttcccgcagaacagcattggtgccgtt
ggcagtgccatgttcctgcgctttatcaaccctgccatagtgtctccctatgaggcaggc
atcttggaaaagaagcctcctcctcggattgagcgcggccttaaactcatgtctaaaatt
ctccagagtattgccaatcatgttctcttcaccaaggaagagcatatgaggccttttaat
gattttgtgaaaaacaactttgaggcagcaaggaaatttttcctagacatagcatctgac
tctcctcctagtgattcagtcaatcatagcctctccttcatcagtgatggaaatgtgctt
gccttgcaccgtttgctctggaacaaccaggagagaattgggcagtatttatccagcaac
agggaccacaaggctgttggtagaagaccctttgataagatggctacactcctggcatat
ctcggcccacctgagcacaaacctgtagcagacactcactggtccagtcttaacctcacc
agttccaagtttgaggagttcatgaccaggcaccaggtccatgaaaaagaagaattcaaa
gctctgaagacacttaatatcttttaccaggcaggaacatcgaagaatggcaaccctgtt
ttctattacattgctcgaaggttcaagacggggcagatcaacggtgaccttctgatctac
catgtactacttacactcaagccatattatgctaaacagtacgagatagttgtcgacctc
acccatgttggcccaagcaaccgctttaagactgacttcctttccaagtggtttgttgtg
tttccaaactttgcctatgagaatgtggctgccgtctttatatataattgcaacacttgg
gtgcgggaatacaccaaataccatgagagactgctgactggtctcaaaggcagtaagaag
ctgctgtttattgactcgcctgcacgccttgctgaatacgtggaacctgaccagcagaag
cttccggcttcaaccctggccctggaagaggacctcaaagttttccataatgcacttaaa
cttgctcacaaagacacaaaagtgtccattaaggttggctccacagctgtacaagtgacc
tcagctgaacgtacccgtgttttgggccagtcggtttttctcaacgatatctactatgca
tctgagattgaagagatctgcctcgttgatgaaaaccagttcacactgactattgccaac
caaggaacacccctcacctttattcaccaggaatgcgatgccatagtgcagtctatcatt
catatccgtacacgctgggagctctctcagcctgattccatccctcagcataccaaaata
aggcctaaagatgtgcctggaactctactcaacattgcactcctcaacttgggcagttct
gaccccagcctaaggtcagcagcatacaaccttctctgtgccttaacttgcaccttcaac
ctcaagattgaaggccaactcctggaaacatctggcttgtgcatcccggccaacaacacc
cttttcattgtttccatcagtaagactttagcagccaatgaaccccacctcaccctggag
tttttggaagaatgcatcagtggtttcagcaagtcaagtattgaactgaagcatctgtgt
cttgaatacatgactccttggttgcgcaacctagtgcgcttttgtaagcacaacgatgat
gccaagcggcagcgtgtaactgctattcttgataagctgatcaccatgaccatcaatgag
aagcagatgtatccatctattcaagctaagatctggggcagtctgggacagatttcagat
ttgctagatgtggttctggacagcttcataaagactagtgctaccgggggtctgggttca
atcaaagcagaagtaatggctgatacagctgtggctctggcatctggaaatgttaaattg
gtttcaagcaaggtaattggccgaatgtgtaagataattgacaagacgtgcctgtctcca
actcccactctggagcagcatctgatgtgggatgacatcgccatcctggcacgttacatg
cttatgctctcctttaataactccctggatgtggctgcccacttgccttacctcttccac
gtggtcacgctactggtggctacaggacccctgtccctcagagcatccactcatggcctg
gtcattaacatcatccactcactgtgtacctgttcacagctcaacttcagtgaggagact
aaacaggtgctgcgactgagtctcaccgaattctccttgcccaagttctacctgctgttt
ggcatcagtaaggtcaaatctgcggcggtcatagcgttccgctccagctacagagatcgc
tcgttctctccaggctcttatgagagggaaacctttgcgctgtcctccctcgagacagtg
actgaagccttacttgaaatcatggaggcttgtatgagggacattcctggatgcaaatgg
ttagaccagtggactgagttagctcagaaatttgctttccagtacaacccgtctctgcag
ccacgggcgctggtagtgtttggctgcatcagcaaacgtgtaactcatggtcagatcaaa
caaatcatccgcatcctcagcaaggccagtcctctgctcagtattgatcgggggctggag
agctgcttaaaggggccagataattacaacagtcaggttctcattgaagccacagtcatc
gccctcaccaagctacaacccctcctcattcaggactctcctatgcacagggcactgttc
tgggtggcagtagcagtgctgcagctggatgaagtaaatctgtactcagctgggactgca
ctactggaacagaacctgcatacactcgacagcatccgggtgtttaatgacaagagtcct
gaagaggtctttatggagatccggaagcctctagaatgggattgtaaacaaatggatcat
tttgtcggccttaacttcaactctaacttcaattttgcactagtaggacatctgctgaaa
ggttacagacacccatcctcgaccacagtggcaagaacggtgcgtatcctccacacactc
ttgggtctggtaggaaaacaccgcaactgtgacaaatttgaggtgaacactcagagtgtg
gcctatctggcagctctgctcactgtatcagaggaagttcgcagccgctgcagtctcaaa
cacaggaagtctttgcttctttccgatgttaccatggagaacttccctatagacacttac
tcagtttatcaccctgagcctggatgcagaccactaaaggaaagtcagccatggacatcg
cccaaagtatcagaacgctacctggcagcgtattatcccacaatgggccagaccagccca
cgcacccgcaagtccatgagcgtcgatatgggacagccctcacaggctaatgccaagaaa
ctgctgggcaccaggaagagttttgaccatctgatatcagattccaaagcaccaaagaga
ccagagatggaatcgggcatcactactcctccgaagatcaggcgggtggctgagaatgac
tatgacattgagtcccaaagaatcgccaactctcatttgcgcaaggtttctgtgtccgag
tccaatgtgctgctggatgaagaggtgttaactgaccccaagatccaaatgttgctgctt
actgtgctggccacacaagtgaagtactcgactgacgagttccaccaaagaattctctat
gagtatttggctgaagccagtgtggtctttccaaaggtgttcccagtggtgcacaatctg
ctggactcaaagatcagtacattgctgtccatgtgtcaggaccccaacctcctgaaccct
gtccatggcatcgttcagagtgtggtctaccacgaggagtccccacctcagtaccagcct
tcatgtctgcagagctttggttttaatggactttggaggtttgccggccccttctctaag
caaacccaaatcccagactatgctgaactagtggtcaagttcctagatgctctgattgat
acttaccttccgggaattgaagaggaaggaggcgaagagtcccagcgaacgccaacctct
ccgtatccacccatagttcagagccagctgagcatcactgccaacctgaacttgtccaac
tctatgacctcgttggcgacctcgcagcactcaccagagggccccatagtttatagacgc
tccccaactttgtcccatgccaggacagcagaagagatgcccccgaaaaccgctgcctct
ctgccttgctctaagtcagctgtgttcccaccacacctcgtcctcccagcaggtattgac
aaggagaatgtggagctgtctcccacctccagcttgtgcagcagcagcagagcgcgtcat
ggttcagccagccaggtgcagaaacaacgaagcactggcagcttcaaacgcaccagcatc
aagaagatcgtctga
DBGET
integrated database retrieval system