Silurus meridionalis (southern catfish): 124394940
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Entry
124394940 CDS
T08004
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124394940
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124394940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
124394940
NCBI-ProteinID:
XP_046719405
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All DBs
Position
12:2087652..2099198
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AA seq
693 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHLLEA
EANNAAIVSQWQQEPKEKVVSLLLSHLPLLQPRNSEVKCEYMKLLQQVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTNLALWLNHLEEHLSARPPPGPYHHHHHARQGSDEWTGPT
DSLEVAHAWHDKSPSTCSSPAGQNGHMGFPSAAGVPSPINSTGLSGQVQPSSVTRSMSLV
PGNQPGCSSDWLGQDEVGGRQGVTGAEHAPLSPQGSVASSGSEQTEDQTNTRNTFQEDGS
GMKDVPTWLKSLRLHKYASLFSQMSYEEMMVLTEQHLESQNVTKGARHKIALSIQKLRER
QSVLKSLEKDILEGGNVRNALQELQQIVITPIKAYSPTTASQREVEPTNKAANTVEEKDA
SVEGFQSHNPSPCDGETSSTPISEGDIPGQFTRVMGKVCTQLLVSRPDEENISCYLQLIE
KCSTHEAFTETQKKRLASWKQQVLKLLRLFPRKAMLDMPVYRQKGWAYGSNSLPTAGSVA
GGVSRRGQRQFPLPPRGAPLPSRMGIITHSPRHTLANQPALSTQGRQNLWFGNPGGSNSM
PSQSRSSVQRTHSLPVHTSPQTMLLFQQPGTHPFFVSACRHTHTFFLSHLSWLLLPECAV
PGTDLEINPTLESLCLSMTEHALGDGMDRTSTI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggattttgacggactggtttaagggctggaatgaatgc
gagcagacggtggcactgttgtcactgctcaagagggtttcgaggacccaagcacgattc
ctccacatttgcctggagcactggctggccgactgcacggagatacacttactggaggct
gaggccaacaatgcagccattgtaagccagtggcaacaggaacccaaagagaaggttgtg
tcactgctgctttcgcatctccccctgctgcagccacgtaacagcgaggtcaagtgtgag
tacatgaagctgctacagcaggtcctgagccacaccatcgagagcagcttgtttgtggag
gagagccggcagctgctttcctatgccctcatccacccggccaccacgcttgatgatcgc
accaacctcgctttgtggctcaaccatctcgaggagcacttgtcagctcgaccaccacct
ggaccgtatcatcaccatcatcatgccagacagggctcagacgaatggacaggtccgacc
gactccttggaggtggcacatgcctggcatgataaatcgccatccacgtgtagctcgcct
gccggccagaacgggcacatgggcttcccgagtgcagctggagttccctctcctatcaac
agcacaggcctgtctggtcaggtacaaccaagctcagtgacacgctcgatgtctcttgtt
cctggcaaccaaccgggctgcagctccgactggctgggccaggacgaagtgggcggtcgc
cagggtgtaacgggggcggagcatgcaccgctgtctccacagggcagcgtagcttcttca
ggcagtgaacaaacggaggatcaaaccaacacacggaacacgttccaggaggacggcagc
ggcatgaaagatgtgccaacgtggttaaagagcctccgtctgcacaagtacgcatccctg
ttctcccagatgagttatgaggagatgatggtccttaccgaacaacatctagaatcacag
aatgtgaccaaaggagcccggcacaagatcgccctcagcattcagaagctgcgagaacga
caaagtgtcctcaagtctcttgaaaaggatatcctcgaaggtgggaatgttaggaacgcc
ttgcaggaacttcagcaaatcgtcatcacgcccatcaaagcctacagcccaaccactgct
tcccagagagaggtggagcccaccaacaaggcagccaataccgtggaagagaaagatgcg
tctgtagagggctttcagagccacaatccttcgccctgtgacggggagacttcgtccacg
cccatctcggaaggggacattcccgggcagtttacgcgggtgatggggaaagtgtgtacg
cagctgctggtgtcgcggccagacgaggagaacatcagttgctatctacaacttatcgag
aagtgctcaacacatgaggcgttcacagagacgcagaagaagcggttggcgtcgtggaag
cagcaggtgctgaagctgcttcgccttttcccacggaaagccatgctggacatgcccgtg
tacagacagaaagggtgggcgtacgggtcaaactctttgcccacagcaggctctgtggct
ggaggggtgtctcggcgaggacaaagacagttccctctgccccctcgtggagcgccgctt
cccagtcgcatgggcatcattacacactcgccacgacacacactcgccaaccagccagct
ctcagcacgcagggcagacagaacctgtggtttgggaatcccggaggaagcaacagcatg
ccgagtcagagccggagctcagtacagagaacacactccctccctgtacacacgtctcca
caaaccatgctcctgtttcagcaaccaggtacacaccctttctttgtttctgcatgtaga
cacacacacactttcttcctctcacacttgtcttggttgcttctgccagaatgcgcggtt
ccagggactgacctggagatcaaccccacgctggagtcactgtgcctcagtatgactgaa
cacgccttaggagatggaatggacagaacgtcgacaatatga
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